BGIOSGA017961

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Revision as of 02:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017961| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017961, complete gene.| tag = OsI_201...")
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Gene Name

BGIOSGA017961

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017961, complete gene.

LocusTag

OsI_20132

Ensembl Transcript ID

BGIOSGA017961-TA

Ensembl Protein ID

BGIOSGA017961-PA

Length

4931

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23043104..23048034

Sequence Coding Region

23047707..23048034,23047528..23047599,23047128..23047181,23046841..23047016,23046571..23046757
,23046272..23046417,23046027..23046181,23045827..23045908,23045632..23045747
,23045401..23045496,23044989..23045112,23044286..23044551,23043428..23043642
,23043104..23043330

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23043104..23048034 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23043104..23048034 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGTGGATGGCTTGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTGCCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAAGGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCTGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTTCTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTCTTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATTTATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAG</cdnaseq>

Protein Sequence

<aaseq>MAARATFSRFPVTAEALEACAVQWGIAVTPFAAADERGQAPAAGAGGDRVPRCEHCWAYLNSHCDMERWGWSCALCGTLNGFDDDALRRLQHPEGWPELTSSFVDLEIPVDGLEGAGDGVQARPVYVAAVDLACSEEFLELIKSALLAALEALIPGSLFGLMTFSHKIGLYDVQGPIPVVKNVFIPPDTEEDGLPVALEDAMPLLSFLAPIDTCKDRIAAALDTLRPTSSWERGAASGQEPDTVLLGGRGFGTAMSALTDYLSSEYGTTFALARVFAFLSGAPDYGDGQLDTRRYGEQYASKGEDPDLALLPEQIPFYKDLAAVAVQAGVCVDIFAITDEYTDLASLKFLSIESGGSLFLYTNTDDSTLPQDIYRLLSRPYAFGCVLRLRTSSDFEPGNSYGHFFPDPQYEHVQHIICCDSFATYAYDFNFSHPEGFSRHTDPAVVQIAFQYSVIEPVKHTSENETQSSTSNMFCLKRRLRIRTLQYRPAKNINEIYDSVDPETLLHILVHKVILISLDKGVKEGRSLVHDWLSLLIARYNQALRSDARIPESHVDVDFLQCPQLQMLPQLVFALLRNPLLQLHEEGIHPDYRIYLQCLFSALEPSSLAKAIYPVLVSYSSPDKQAFPRHTLSRAALIMSESPIFLLDAFTNLIVYYSPSADPSLPFPPPHDCLLRTMINELKQGRCITPKLTFIHGGREDPALFERYLIEEQDVDGTGFTSGKGFVSFRESIRHAATDIIETESSI</aaseq>

Gene Sequence

<dnaseqindica>1..328#436..507#854..907#1019..1194#1278..1464#1618..1763#1854..2008#2127..2208#2288..2403#2539..2634#2923..3046#3484..3749#4393..4607#4705..4931#ATGGCGGCGCGCGCTACGTTCTCCCGCTTCCCCGTGACGGCGGAGGCGCTGGAGGCGTGCGCCGTGCAGTGGGGCATCGCCGTGACGCCCTTCGCCGCCGCCGACGAGCGCGGCCAGGCGCCGGCCGCGGGCGCCGGCGGCGACCGGGTCCCGCGCTGCGAGCACTGCTGGGCCTACCTGAACAGCCACTGCGACATGGAGCGCTGGGGCTGGTCCTGCGCCCTCTGCGGCACCCTCAACGGCTTCGACGACGACGCGCTCCGCCGCCTCCAACACCCCGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGGTTTTATTACCTCTTTTCCTTCCTCCTCCTGCGTCAGCGTGGTTTCTCTTAGCTGGTAGTACCGTAGTGAAATGTAACCCGACAACCCATGAATTGGGTTTGTGCAGTGGATGGCTTGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCATGTAAGTGGAATCCTTCGCGTATTGCACCGTGATCATGGAATTTTTTGAATATTGCCCCCCTCCCCTCTGCAGTTTGTATTGGTGGGAATTTAATTTTGCTTGTTATATAATGTAATCTTACCCACGTAAACCCAACTATATGAGAAACATAGAGAAAGGAGAGGAAAAAAATGAAATCGTGTAGCTCAAATTTGTATGCTGTTATTTGATAATATCTGCAGGTATGAGTCTAGGAGCTGAGCATTCGATGATTATTTAGTTGCATTTCATCTTCAAACAGTCCCCTCAGTTCGTGCTCATATGATTTATTTTCAGAATTGTTATTGTAGTGTTTGAATGTATTCAGGTTCTGAAGAGTTCCTGGAGCTTATTAAGAGTGCACTTCTGGCAGCTCTAGAAGGTTACTGTTTTGAACACTTGAAACTTACTGAATTATTGGCTGCCTGAACTGTGAATTGTCAGTGAGTATAATTTATGTTGCTCCTCAGTTGGCTTTTTCTCTGTGCAACAGCTCTGATTCCAGGCTCCCTGTTTGGGCTTATGACGTTCAGTCACAAGATTGGACTGTATGATGTACAAGGTCCAATTCCAGTTGTAAAAAATGTTTTCATCCCTCCAGACACAGAAGAAGATGGGCTGCCTGTTGCCCTTGAAGATGCCATGCCCCTACTTTCTTTTTTGGCCCCTGTATGTTATGATATTATAATAAGTGTTACAGTTTGCTGAGTCATTTTGAACATGTAATAATGGCAAGATAAATTTATGAGCAGATCGACACATGCAAAGATCGAATTGCTGCTGCCCTTGATACATTGCGACCTACATCTTCATGGGAGCGAGGTGCTGCTTCTGGGCAGGAACCTGATACTGTTTTGCTTGGTGGCCGAGGTTTTGGAACAGCCATGTCTGCTCTAACTGACTACCTAAGTTCAGAGTATGGAACTACTTTTGCTTTGGGTAGGGTAACATATATTCCCAATGTGTGCATTTTTTTTAAATGATTCTTGTCAGTCATGCATTACTTTTCTAAGATAAGATGATGTACTTGCTGATATTGTTATTAAATCTTTTTAGCCTAACTACATTTTTTTAAAAAAAAAATTCAAACAGCTAGGGTATTTGCTTTTCTGTCTGGTGCTCCTGATTATGGAGATGGTCAACTAGACACTAGGAGATATGGTGAACAATATGCTAGCAAAGGGGAAGACCCTGACCTTGCATTACTTCCTGAACAGATACCATTTTATAAAGACCTGGTAAGCTCCGAATGATTCTGGAGGGAAAGAAATTACATTTTTGGCTGAACATGTTTGGCATATGTCAACCTTATTGAAAATTTGAAACAGGCAGCTGTCGCTGTTCAAGCAGGAGTATGTGTAGACATATTTGCTATAACCGACGAATACACCGATTTGGCTTCGTTGAAGTTTTTAAGTATTGAAAGTGGTGGCTCATTGTTTCTGTATACAAATACAGACGATTCAACACTTCCCCAGGACATGTGAGCTTGATCGTTTGTTTGTCTTTTTTTTTTCTGCACTTCATTCAAATTCCATATTCCAAATTTTCTGATCCACATGAATGGCCTTTGCCCCTTGGTTTGCCTTTTCCTCTAACAGATATCGCTTATTGAGTAGACCCTATGCATTTGGTTGTGTTCTAAGGTTGAGAACATCTTCAGATTTTGAACCTGGCAATTCTGTAAGAATTCAAGCTATTTATGTTTAATAACTTTGATGTATTGTCAAGTCAATATCTAATGCATCTGTCATTTTTACAGTATGGCCATTTCTTCCCTGATCCTCAATATGAACATGTGCAACATATCATCTGCTGCGATTCATTTGCTACTTATGCATATGACTTTAACTTTTCACACCCTGAGGGCTTTTCCAGGTATGATTTTTTTCTCAGTATATATTTCACTCAACCATGGGACTTTCCAACTTTCTGCCTTGATCCTATCAATTTAGTGAAGACATGTGATACTTGTCATCAGTGATCAGATAATATGTTTTACATTTTTCACAGGCACACAGATCCTGCTGTTGTACAAATTGCATTTCAGTATAGTGTTATTGAACCTGTCAAGCATACATCAGAGAATGAAACACAATCATCTACAAGGTATGCAGGATTTTGGCATTCCTTAGTTTACCGTTAAGTTAGTCTGTTCCATGCCTAATTGGCCTCCTTTCTGGCCGAACATGCCAAGCCTCTTGTGCTATTAACATTTAATATTTCTGTTTTTCTACTACTAGTTCCTGTGCTTACAATGATTAATAATGCATGAGTGAGTATAGTAATGTTACATAGCTTCATTTGTTCCTTCTTCAGTTTCATCTTTGTTGCTGTGCTTTTGGTCAAGTGATGTCTAATTTTCAAGTTGATTAATTATAATGTCACATCCTACAGTAACATGTTTTGTCTAAAGAGGCGGTTGAGAATAAGGACATTGCAGTATCGACCAGCTAAAAATATCAACGAAATATATGACAGTGTTGATCCAGAGACTCTCCTACATATTCTAGTACATAAGGTAACCATGTTCAGTTTTCTTGAAATCATACCACTTCATTTCAAGATGTTCGGCAGTTTGAGAAGAAAAATCTTTATGGTTCATTCGGTTACTCTGTTGCATGATATGTTGTCAGGATTAGAAATGTAGTGAACTCAAGACCATTAAAATAGTGTGCTATGGATTTCAATTGGTGAAGGTTCTATTTAAGGAAGATTCCTCTGTAGATTGAATTCTGTAAGAAAATCATTAGGAAGACGTTTTTTGTAGCTTTTTTTAAAAACAATTTTGTTGAATGATTATCCAAGTTTTTCTTGGAGCTCCATGTTTACGCCTTTTAACTAACAACACCTGTGAGGAATATCACTTTTCTTTCTTGCCCTAAATTAACTTTGATTTCTATACTTTTACTATTTTTGCTCTCCTAACTTAAGTCTATTCTGAAATGTTGGCATCAGGTTATTTTAATTTCATTGGATAAAGGAGTTAAAGAGGGCAGAAGTTTGGTACATGATTGGCTGTCTCTCCTTATAGCTCGGTATAATCAGGCATTGAGATCTGATGCACGAATTCCAGAATCACATGTTGATGTTGACTTCTTACAGTGCCCACAGCTGCAAATGTTACCTCAGCTTGTGTTTGCATTGTTAAGGAACCCTCTTCTTCAGTTGCATGAAGAAGGCATTCACCCAGATTACAGGATATATTTGCAATGCCTTTTCAGGTGGGAAATCAAAATCTAAATTTAGGGCTTTGTACACTGTTCATTAAAAAAAGCATCTAAAAGAATGATGTTGTAGAATATTTGCACTAGCAATTACTTAAAAGAATCATAGATGTTATACATGTTAGAATATGCACGCTAGCAAAAAAAACGTTGGGAAAAATTATAATCATGTATACTGTAGGAAACACAAGGGGTTTGTAGCCAAACTTAACCAAGCCAAAATCTTGGCAATGCCCAAAAAAAAGTCACTTGTTTGGTTTGTAGCTAAAAGAATTGGCATTGCCAAATTATTTGGCTTAGTTGAAGGCCAAATGCAACTTTGGTAGTAAAGCAAATGAGTGCCTAGCCAATTTTTACCAGAAAAAAATTGGCAAAGGCCAATTCTTGCCATTGCCAAAAATTGGTAAGGCTAGAGATGACTATGAACCAAACAAGCCCAAGATTGTACACATTTTCTATAATCATGTGTACTGTAAGAAAGGCAAAATATTGACCACTCTGAGAACTAAAAGGAAAAGATAAGAATAAATTGCTGCTGCTGCTGCTTTGGATCTATTTTGCTTTATTTGGAATTGAAGCCAATTTTCTATCTCCAAGCGTACAAGTTTTTTATTGAAACTCCTTTCCGTTGTTATTACAGTGCCCTGGAGCCATCTTCTCTAGCCAAAGCTATATACCCAGTTTTAGTTTCATACTCGTCACCTGACAAGCAAGCATTCCCTCGGCATACGTTGAGCCGGGCTGCTCTAATCATGAGTGAGAGCCCCATATTTCTTCTGGATGCATTTACGAACCTTATTGTTTACTATTCACCGTCTGCTGATCCTTCACTTCCTTTTCCTCCACCTCATGACTGTAAGTACACCATTTCACTGTTTGCATGGTGTGCATTGTTTTTTTCACTTGATTGCTTCATCTACTTATTTGTTTCATATCTTTGCATATCACGTAGGTCTTTTGAGAACCATGATTAATGAGTTGAAGCAGGGCAGGTGTATAACACCAAAGCTGACATTTATCCATGGAGGACGAGAAGATCCAGCATTGTTTGAGAGGTATCTTATTGAAGAGCAAGATGTTGACGGTACAGGGTTTACAAGTGGTAAAGGGTTTGTATCGTTCCGTGAGAGCATCAGGCATGCTGCAACAGACATCATCGAGACAGAAAGTAGTATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017961

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017961&oldid=46717"