Os11g0654400

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0654400| Description = Similar to Short chain alcohol dehydrogenase-like| Version = NM_001074916.1 GI:115486480 GeneID:4351040| Length = 12...")
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Gene Name

Os11g0654400

Description

Similar to Short chain alcohol dehydrogenase-like

Version

NM_001074916.1 GI:115486480 GeneID:4351040

Length

1292 bp

Definition

Oryza sativa Japonica Group Os11g0654400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28011676..28012967

Sequence Coding Region

28011676..28011843,28012250..28012799,28012879..28012967

Expression

GEO Profiles:Os11g0654400

Genome Context

<gbrowseImage1> name=NC_008404:28011676..28012967 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28011676..28012967 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccgcagctcgcagcatcccctaccggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgggcatgcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcggcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccaccgtctgcgacgtctccgcgcgcggcgaccgggagaggctggtcgccgcggcggcggcggagttcggcggcaggctggacatcctcgtcaacaacgtcggccggaccatgttccgggcggcggcggcgtgctccggcgaggacttcgccgtgctcgtggccaccaacctcgagtcctgcttccacctctcccagctcgcgcacccgctcctgctcgccgccggcggcgcccgcggcggcggaggcggctgcgtggtgaacatctcctccgtcgccggcagcgtcggcatgccggcgctggccgtgtactccatgaccaagggcggcatgaaccagctcacgcggagcctcgccgccgagtgggccggcgacggcattcgtgtcaactgcgtcgcgccgggaggcgtcaagactgatatctgccaagacgagacgatagacccggagctgatcaagagcgagatggaccggctgccgatgcggcggctggcggagccggaggaggtggcggccacggtggcgttcctctgcatgccggcggcctcctacatcaccggccaggtcgtcggcgtcgacggcggacgcaccatttcctag</cdnaseq>

Protein Sequence

<aaseq>MAAAAARSIPYRWTLAGATALVTGGSKGIGHAIVEELAGFGARV HTCARNAAELEASRRRWEERGLRVTATVCDVSARGDRERLVAAAAAEFGGRLDILVNN VGRTMFRAAAACSGEDFAVLVATNLESCFHLSQLAHPLLLAAGGARGGGGGCVVNISS VAGSVGMPALAVYSMTKGGMNQLTRSLAAEWAGDGIRVNCVAPGGVKTDICQDETIDP ELIKSEMDRLPMRRLAEPEEVAATVAFLCMPAASYITGQVVGVDGGRTIS</aaseq>

Gene Sequence

<dnaseqindica>1125..1292#169..718#1..89#atggcggccgccgcagctcgcagcatcccctaccggtggaccctcgccggcgcgacggcgctcgtcaccggcggcagcaaaggcatcgggtatatatatacacatcaccgtatatatacgagtataatacgactgtatatacctacgtatacgtgttcgaccgtataggcatgcgatagtggaggagctcgccggattcggggcgcgcgtgcacacgtgcgcccggaacgcggcggagctggaggcgagccggcggcggtgggaggagcgggggctccgcgtcaccgccaccgtctgcgacgtctccgcgcgcggcgaccgggagaggctggtcgccgcggcggcggcggagttcggcggcaggctggacatcctcgtcaacaacgtcggccggaccatgttccgggcggcggcggcgtgctccggcgaggacttcgccgtgctcgtggccaccaacctcgagtcctgcttccacctctcccagctcgcgcacccgctcctgctcgccgccggcggcgcccgcggcggcggaggcggctgcgtggtgaacatctcctccgtcgccggcagcgtcggcatgccggcgctggccgtgtactccatgaccaagggcggcatgaaccagctcacgcggagcctcgccgccgagtgggccggcgacggcattcgtgtcaactgcgtcgcgccgggaggcgtcaagactgatatctgccaagacgtaagctaaatactcccattcgtttcagactaggaatcgttttgactttagtcaaagcaaaattacttcaaatttaaccatgtttgtagacaaatataatgatatttacaacaccaaataagtttcattaaatttgtaattaaatatatttttacaatatatttatcttgggatgtaaatgtaactgttttttttctataaacttggttaaacttaaagcattttgatttttaccaaaatcaaaactacttataatctaaaatcttaaataggggagtatataccacgtcaattgatctccagctcagttactcatatgcaattagtgcatgattaattgtacagttagtgtgattaatcacatcattgattttgattgattaatttggatggatggatggagcaggagacgatagacccggagctgatcaagagcgagatggaccggctgccgatgcggcggctggcggagccggaggaggtggcggccacggtggcgttcctctgcatgccggcggcctcctacatcaccggccaggtcgtcggcgtcgacggcggacgcaccatttcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0654400, RefSeq:Os11g0654400