BGIOSGA017972

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Revision as of 02:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017972| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017972, complete gene.| tag = OsI_201...")
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Gene Name

BGIOSGA017972

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017972, complete gene.

LocusTag

OsI_20115

Ensembl Transcript ID

BGIOSGA017972-TA

Ensembl Protein ID

BGIOSGA017972-PA

Length

3004

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22881283..22884286

Sequence Coding Region

22884280..22884286,22883440..22884138,22881283..22882013

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22881283..22884286 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22881283..22884286 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCAGGAATATATGTGGGCGATGATAAGGTGATCCATTTTACTAGAGGAAGGGGCCAGGAGGTCGGAACAGGAACTTTCATTGACCTCCTCCTTATGAGCTCTGGTCCTAATACAAACACTCCATGTTCAATATGCAACAATGAAGGTGCCACCACCAATACGGAGACAAATGGTGTGGTATCCTCTTGCCTCAACTGCTTCCTGTCAGGGGGCGCCCTCTACCGTTTCGAGTATGCTGTCAACCCAGCACTTTTCCTTGCCAAAGCGCGAGGAGGGACGTGCACGCTTGCCCCAACTGATCCAGATGAGGTTGTTGTGCGCCGTGCCAATCACTTGCTCAGCAATGGTTTCAGGTGCTACAACCTGTTCAAGAGCAACTGTGAGGACTTCGCGATATACTGCAAGACAGGCCTCCTTGTGGCAGAGCAAGGTGTCGTCGGGCAGAGTGGGCAGGCCATCTCCATCATCGGTGGACCTCTTGCTGCGGTGATTTCAACCCCATTCCGCCTAGTAACCACGAATATCTATGGAATGGCGGTGATGGCAGTTGGGGTGTATTGCGCCAGCAGGTACGCAGCTGACATTGGCAACCGGCGAGATGTGCTGAAAGTGGAAGTGGAGGACCTGACTGCTGGGCTGGCGAGTGGCAGGATTCGTGCCGTGGAGAATATCAGTCAGTTGGTTGCTCCGGCAGAAGCCCAAGGAATATATGTGGGCGATGATAAGGTGATCCATTTTACTAGAGGAAGGGGCCAGGAGGTCGGAACAGGAACTTTCATTGACCTCCTCCTTATGAGCTCTGGTCCTAATACAAACACTCCATGTTCAATATGCAACAATGAAGGTGCCACCACCAATACGGAGACAAATGGTGTGGTATCCTCTTGCCTCAACTGCTTCCTGTCAGGGGGCGCCCTCTACCGTTTCGAGTATGCTGTCAACCCAGCACTTTTCCTTGCCAAAGCGCGAGGAGGGACGTGCACGCTTGCCCCAACTGATCCAGATGAGGTTGTTGTGCGCCGTGCCAATCACTTGCTCAGCAATGGTTTCAGGTGCTACAACCTGTTCAAGAGCAACTGTGAGGACTTCGCGATATACTGCAAGACAGGCCTCCTTGTGGCAGAGCAAGGTGTCGTCGGGCAGAGTGGGCAGGCCATCTCCATCATCGGTGGACCTCTTGCTGCGGTGATTTCAACCCCATTCCGCCTAGTAACCACGAATATCTATGGAATGGCGGTGATGGCAGTTGGGGTGTATTGCGCCAGCAGGTACGCAGCTGACATTGGCAACCGGCGAGATGTGCTGAAAGTGGAAGTGGAGGACCTGACTGCTGGGCTGGCGAGTGGCAGGATTCGTGCCGTGGAGAATATCAGTCAGTTGGTTGCTCCGGCAGAAGCCCAAGGTCTGACCGTAACCGCACCTGTTGCTGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MPGIYVGDDKVIHFTRGRGQEVGTGTFIDLLLMSSGPNTNTPCSICNNEGATTNTETNGVVSSCLNCFLSGGALYRFEYAVNPALFLAKARGGTCTLAPTDPDEVVVRRANHLLSNGFRCYNLFKSNCEDFAIYCKTGLLVAEQGVVGQSGQAISIIGGPLAAVISTPFRLVTTNIYGMAVMAVGVYCASRYAADIGNRRDVLKVEVEDLTAGLASGRIRAVENISQLVAPAEAQGIYVGDDKVIHFTRGRGQEVGTGTFIDLLLMSSGPNTNTPCSICNNEGATTNTETNGVVSSCLNCFLSGGALYRFEYAVNPALFLAKARGGTCTLAPTDPDEVVVRRANHLLSNGFRCYNLFKSNCEDFAIYCKTGLLVAEQGVVGQSGQAISIIGGPLAAVISTPFRLVTTNIYGMAVMAVGVYCASRYAADIGNRRDVLKVEVEDLTAGLASGRIRAVENISQLVAPAEAQGLTVTAPVAA</aaseq>

Gene Sequence

<dnaseqindica>1..7#149..847#2274..3004#ATGCCAGGTAGAATACTGCAATAGCAGATAAAATAGATCTTGCACAAGCTGCAGTTGTTGCCATTTGTTGTAGATTTGGGTATGCAGTTACTTTTTTCTTGTAGTCTTTTTTTCCTTTTTTGTAGATATAACTGTATTTTTCATGCAGGAATATATGTGGGCGATGATAAGGTGATCCATTTTACTAGAGGAAGGGGCCAGGAGGTCGGAACAGGAACTTTCATTGACCTCCTCCTTATGAGCTCTGGTCCTAATACAAACACTCCATGTTCAATATGCAACAATGAAGGTGCCACCACCAATACGGAGACAAATGGTGTGGTATCCTCTTGCCTCAACTGCTTCCTGTCAGGGGGCGCCCTCTACCGTTTCGAGTATGCTGTCAACCCAGCACTTTTCCTTGCCAAAGCGCGAGGAGGGACGTGCACGCTTGCCCCAACTGATCCAGATGAGGTTGTTGTGCGCCGTGCCAATCACTTGCTCAGCAATGGTTTCAGGTGCTACAACCTGTTCAAGAGCAACTGTGAGGACTTCGCGATATACTGCAAGACAGGCCTCCTTGTGGCAGAGCAAGGTGTCGTCGGGCAGAGTGGGCAGGCCATCTCCATCATCGGTGGACCTCTTGCTGCGGTGATTTCAACCCCATTCCGCCTAGTAACCACGAATATCTATGGAATGGCGGTGATGGCAGTTGGGGTGTATTGCGCCAGCAGGTACGCAGCTGACATTGGCAACCGGCGAGATGTGCTGAAAGTGGAAGTGGAGGACCTGACTGCTGGGCTGGCGAGTGGCAGGATTCGTGCCGTGGAGAATATCAGTCAGTTGGTTGCTCCGGCAGAAGCCCAAGGTCTGACCGTAACCGCACCTGTTGCTGCTTAAAGTGCACCACTGAGATCTATACATTACTCCAGACCTTCTGCTGCTAAATTTATGGATGTTTCGTTGTCAAATATCAGCTGAAATTGTGTACCAGAGTGAGCCTCCCATTCAGCAATAGCTGTACAAACCATGAAAAAACTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAGCCTGTTTTTTTTTTCCTTCAATCTGTGGTTAGGATTGGGAAGGAGACCCTGAAGGCGGGGGATCACATCTATTCGTGGAGGGCCGCGTGGGTCTACGCGCATCACGGTTAGGAGTCCCTCTCGTCTGTTCCATTTCCCCTCTTTTTAAGTTTTGATTTGATCAGATGAATCAGGTTTCGTTACCTTTTTGAATTTGATGGCTGTCTGCGTCTTGGACCAACCAATGGGTTAGAACAAGGGATTGATAGACTTCAGAGAATCTAGCCCAGTCTAATATCTGCAAAAGATTTGAATAATTCGGAAGTTTTAGGTAACTAGGTTACTAGGAGATCCATATGCTGTTTGGTGCTTGATTTTCTATATAACAGAAGGGATATCATGCAAATTCTATGGTGGAATTAGATGTGTAGTATATATGTTTGTTCTGTGTATACTCAATGAACTTGTTTTGATGCTATGTTGAAAGCCTTGGGGCAGATGAATTGGATTTGAATTGATTATCAGGCATGTGAGGCAACTGACCTGAATTTTTTGGGGGAGCACGCAAGAGAGTTGCACATATTATTTGTGTTCAGAACTTATGAAAATTTAACGAGGAAATTGCAATAGCAATTTTGTTTTTGCAACTAATAGCAGTTTTTTTTTTGGGAAAGACCAGCAGAGCTGGGGTATATATTGTACTCCCTCTGTTTCATATTATAAGTCGCTTTGAATTTTTTATAGTCAAACTTTTTCAAGTTTGATTAAGTTTATGAAAAAAATAGTAATATCTACAACACGAAATTAGTTTCATTCAAACTAACATTTAATATATTTTGACAATATGTTTGTTTTGTGTTGAAAATATTGCTATTTTTTTATATAAAGTTGGCCAAATTTAAAAAAAAAAACAAAAAAAAGTCAAAATGACTTATATAATATGAAACGGAGGGAGTAGTAGGGAAGATAACTTTACATGAGCACATGACAAGCCCTTGGAAGAAAGAAAACCAAAGAGAAGAAAAATAAAAGATTCACACGTTGGTTTTTTTATTATTATAAGATTAAATGCCAGGTAGAATACTGCAATAGCAGATAAAATAGATCTTGCACAAGCTGCAGTTGTTGCCATTTGTTGTAGATTTGGGTATGCAGTTACTTTTTTCTTGTAGTCTTTTTTTCCTTTTTTGTAGATATAACTGTATTTTTCATGCAGGAATATATGTGGGCGATGATAAGGTGATCCATTTTACTAGAGGAAGGGGCCAGGAGGTCGGAACAGGAACTTTCATTGACCTCCTCCTTATGAGCTCTGGTCCTAATACAAACACTCCATGTTCAATATGCAACAATGAAGGTGCCACCACCAATACGGAGACAAATGGTGTGGTATCCTCTTGCCTCAACTGCTTCCTGTCAGGGGGCGCCCTCTACCGTTTCGAGTATGCTGTCAACCCAGCACTTTTCCTTGCCAAAGCGCGAGGAGGGACGTGCACGCTTGCCCCAACTGATCCAGATGAGGTTGTTGTGCGCCGTGCCAATCACTTGCTCAGCAATGGTTTCAGGTGCTACAACCTGTTCAAGAGCAACTGTGAGGACTTCGCGATATACTGCAAGACAGGCCTCCTTGTGGCAGAGCAAGGTGTCGTCGGGCAGAGTGGGCAGGCCATCTCCATCATCGGTGGACCTCTTGCTGCGGTGATTTCAACCCCATTCCGCCTAGTAACCACGAATATCTATGGAATGGCGGTGATGGCAGTTGGGGTGTATTGCGCCAGCAGGTACGCAGCTGACATTGGCAACCGGCGAGATGTGCTGAAAGTGGAAGTGGAGGACCTGACTGCTGGGCTGGCGAGTGGCAGGATTCGTGCCGTGGAGAATATCAGTCAGTTGGTTGCTCCGGCAGAAGCCCAAGGTCTGACCGTAACCGCACCTGTTGCTGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017972