BGIOSGA017987

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Revision as of 02:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017987| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017987, complete gene.| tag = OsI_200...")
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Gene Name

BGIOSGA017987

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017987, complete gene.

LocusTag

OsI_20089

Ensembl Transcript ID

BGIOSGA017987-TA

Ensembl Protein ID

BGIOSGA017987-PA

Length

3978

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22628238..22632215

Sequence Coding Region

22632049..22632215,22631518..22631803,22631071..22631382,22630767..22631015,22629876..22630206
,22629321..22629770,22628238..22629121

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22628238..22632215 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22628238..22632215 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAAAGGGGGAAAGAAGAAGGGGGTAGACCTAGAAGGCCTCTTCCGAGGTCTTAAGCTGTCCCGGGAGGAATTGAGAGGCATGAAAGGATCTTGGTGCTTGGAGGAGAAGGATGGCGGAAAAGTTCAACAGGCAGTGGGGAAGTTATTCTCTCCACGAGCAGGGGTGTACAATCTGCCGTTCGGCTTGATGAATGTGGATACTGGCCGGCTAATTGGGAATAAAATTGGGAAAGCATTGGAGGTTGATACGGATGAGGATGGGTCAGCCGTGGGAGGTTATCTGCGGGTGAAGGTGCTCATGGATGCCCGCAAAGCCCTAATCCGCGGGGTGATGATGGAGGGTGTCGCCGGTGAGAAGGAGAATTGGTGTGGAGTGAAGTACGAGTTCCTGCCAAATTTTTGTTATTCCTGCGGCGTTCTGGGTCATGTGGAGGAGTGTGATGATAAGAGGAAAAGTGGAGTTGAGAAAGGAGGTAGCAGCGGTGTAGGTGGAAAATCTGCTAGCCGGGATGACCCTGAACTAAGGGATGATGCTGAAAGCCCGGGTAAAGGGCATCCCAAGATCCGGATGGGGGGTGCTCCGAAGAAGCTGACCTTTGTCGGTGATGGTAGTTCGGGGAGTTTGACTGAGGAGAGAGGGCATAAAAAGCTGCTGGAGATTACGGCTCCCTCGGAGCCGCAACTAGTTCCGACCACGGGTGAAGTAGCTAATGGGTTAGATGGAAAGGATGCTCGGGGGAAGGAGCACAGTACCATGCAGGGATCAATCTCGTTGGAAAGCAACGTCGGGCAACAGCAGACTCTCCCGTTGGCTGCTGAAAGTGGTACTTTGGATACTGGGCACTCGGGGACGGGAGATAAGAGGAAGGCCACTTTCAAGCGGCGTCCGCGAGTGATGGATAAGGAAGTCGGCGCCAAGGAGAGCGCGATTGCTGATACTCGAAAGCGCTCTGTAACGGAGGAGATGGTTGTGACCGAAGAACAGAAGAAACAGAATACTCAGGTGGCTGCTTTGGAGGACTGCCAGCTGCATGATCTAGGTTTTGTTGGGGATGCCTTCACGTGGAGGAATCACCATCACCTGGCATCCAACTACATAAAGGAAAGACTTGATAGAGCAGTGGCCAATGGTGCCTGGCGAGCACGCTTCCCGCTTGTTCGCGTAATCAATGGGGATCCGCGCCACTCAGACCATCGTCCGGTCATTGTGGAAACCGGTGCCACTAAAAAGCAACAATGGGGGCAACCTTTGGAGATTATGCAGAAGTTTGAGGCTCGTTGGCTGGAGGAAGAAGAATGCCAGGCTAGAGTGGAGGAAGCGTGGGCGAATGCATTGGAAGGAAGGAATTGGAGAAGTGCAGGAAGGAGCCAAGCTCTAACCGGGAAGTTAACAGAGAACATGTGTTGCGGTACGAAGTTAGAGCGGCTGCTGGATCAACAACATATTTACTGGAAGCAGCGAGCACATTCTACCTGGTTAACCAAGGGCGACCGGAACACAAAGTTCTTCCACGCCCAAGCATCGGAGAGGAAGAAAAGAAATACAATACAGAAGTTGCAGGATGGCCACGGTGGTTTGGTTGCTGGAAATCAACTAAAAAGCTTCATTTTGAACCAGCACCAACAACTCTTTAGGTCGAATGGGTGCTCTCAGATGGATGCAGTATTACAATGTGTCCAAGCGCGTGTGACCCCGGAGAGGAGAGAAGGCCTTGCTGCTCCTTATCAGAGAGAGGAAGTTTGGGTGGCTTTGAAGGATATGGGGGATTTAAAAGCACCAGGCGCAGATGTGATCTCCAAGGTGATAGTCAATCGGTTGAAAGTTGTGCTGCTGGAAATAATCTCTCCGTCCCAAAGTGCGTTTGTCCCGAGGAGGTTGATCACATACAATGTATTACTGGCATATGAGCTCACACACTACTTGAATCAAAGGAAGAAGGGGAAGAATGGAGTGGCTGCGATCAAGCTGGACATGAGCAAAGCTTACGATAGGGTGGAATGGGATTTCCTGCGACACATGATGCTGAGGTTGGGCTTCCATGATCAGTGGGTTAACTTAGTCATGAAGTGTGTAACTTCTGTGACTTACCGGATCAAGATCAATGGGGAGCACTCAGATCAAATATACCCACAGAGGGGGCTGAGGCAGGGAGATCCACTTTCCCCTTACTTGTTCATTATTTGTGCGGAAGGCCTTTCAGCGCTATTACAGAAAGCACAAGCTGATGGAAAGATAGAGGGTATTAAAGTTTGCAGGGACACGCCAAGAATAAACCATCTCTTTTTCGCCGATGATTCCCTTGTCCTGATGCGAGCTGGCCAGAATGATGCGCAAGAGTTGAGAAGGGTTCTTAACATATACGAAGTGGCATCAGGCCAAGTCATAAACAAGGACAAATCATCTGTCCTCTTCAGCCCAAACACACTTCAGAGTGATAGGATGGAAGTTAGATCAGCGCTATGTATTAATCAGGAGGCAAAAAATGAAAGATATCTTGGCCTGCCTGTCTCTATTGGGAAGTCAAGGAGGAAAGCTTTTGAGTATATTAAGAGGAAGGTGTGGCTCCGGATCCAGGGTTGGCAGGAGAAATTACTATCAAAAGCAGGGAAGGAAATCCTTGTCAAAGCTGTGGCCCAGCTATTCCTACCTATGCGATGTCATGTTTTGATTTGA</cdnaseq>

Protein Sequence

<aaseq>MDKGGKKKGVDLEGLFRGLKLSREELRGMKGSWCLEEKDGGKVQQAVGKLFSPRAGVYNLPFGLMNVDTGRLIGNKIGKALEVDTDEDGSAVGGYLRVKVLMDARKALIRGVMMEGVAGEKENWCGVKYEFLPNFCYSCGVLGHVEECDDKRKSGVEKGGSSGVGGKSASRDDPELRDDAESPGKGHPKIRMGGAPKKLTFVGDGSSGSLTEERGHKKLLEITAPSEPQLVPTTGEVANGLDGKDARGKEHSTMQGSISLESNVGQQQTLPLAAESGTLDTGHSGTGDKRKATFKRRPRVMDKEVGAKESAIADTRKRSVTEEMVVTEEQKKQNTQVAALEDCQLHDLGFVGDAFTWRNHHHLASNYIKERLDRAVANGAWRARFPLVRVINGDPRHSDHRPVIVETGATKKQQWGQPLEIMQKFEARWLEEEECQARVEEAWANALEGRNWRSAGRSQALTGKLTENMCCGTKLERLLDQQHIYWKQRAHSTWLTKGDRNTKFFHAQASERKKRNTIQKLQDGHGGLVAGNQLKSFILNQHQQLFRSNGCSQMDAVLQCVQARVTPERREGLAAPYQREEVWVALKDMGDLKAPGADVISKVIVNRLKVVLLEIISPSQSAFVPRRLITYNVLLAYELTHYLNQRKKGKNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQWVNLVMKCVTSVTYRIKINGEHSDQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQADGKIEGIKVCRDTPRINHLFFADDSLVLMRAGQNDAQELRRVLNIYEVASGQVINKDKSSVLFSPNTLQSDRMEVRSALCINQEAKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKLLSKAGKEILVKAVAQLFLPMRCHVLI</aaseq>

Gene Sequence

<dnaseqindica>1..167#413..698#834..1145#1201..1449#2010..2340#2446..2895#3095..3978#ATGGACAAAGGGGGAAAGAAGAAGGGGGTAGACCTAGAAGGCCTCTTCCGAGGTCTTAAGCTGTCCCGGGAGGAATTGAGAGGCATGAAAGGATCTTGGTGCTTGGAGGAGAAGGATGGCGGAAAAGTTCAACAGGCAGTGGGGAAGTTATTCTCTCCACGAGCAGGGTATGTCGTAGGAATGGTGTAGGCGTTGGGCAAAATTTTGTGTCCACAGAGAGGGATTAGGGCTAAGGAGTTGGGAGATAACCTTTTCCTGTTCTCTTTCTTGCAACGCGGGGGGGGGGGGGGGGGGAAGAGAAGAGCCATTACGGAAGGCCCGTGGGAATTCGGAGGAGATCTCATCGTAGTGGATTTTGATGAGACGAAGAGGCTGAAAGACTTGTATTCACACATTTCCCATTGTGGCTCAGGGTGTACAATCTGCCGTTCGGCTTGATGAATGTGGATACTGGCCGGCTAATTGGGAATAAAATTGGGAAAGCATTGGAGGTTGATACGGATGAGGATGGGTCAGCCGTGGGAGGTTATCTGCGGGTGAAGGTGCTCATGGATGCCCGCAAAGCCCTAATCCGCGGGGTGATGATGGAGGGTGTCGCCGGTGAGAAGGAGAATTGGTGTGGAGTGAAGTACGAGTTCCTGCCAAATTTTTGTTATTCCTGCGGCGTTCTGGGTCATGTGGAGGAGTGTGATGATAAGGTATGGAAGGAGGAAGAGCAGCAATTCGGGGACTGGTTGCGAGTCCTACCGATGAAACAGCGGGATGTGCGAGGCTGGAGCTCGGAAGGGGGCAGTTCTGGGGGTTCGTTTCAGCACAGGAGTGCCGTATCCTAGAGGAAAAGTGGAGTTGAGAAAGGAGGTAGCAGCGGTGTAGGTGGAAAATCTGCTAGCCGGGATGACCCTGAACTAAGGGATGATGCTGAAAGCCCGGGTAAAGGGCATCCCAAGATCCGGATGGGGGGTGCTCCGAAGAAGCTGACCTTTGTCGGTGATGGTAGTTCGGGGAGTTTGACTGAGGAGAGAGGGCATAAAAAGCTGCTGGAGATTACGGCTCCCTCGGAGCCGCAACTAGTTCCGACCACGGGTGAAGTAGCTAATGGGTTAGATGGAAAGGATGCTCGGGGGAAGGAGCACAGTACCATGCAGGTTCCTGTGGGGGGGAGGAGTAAAGGACAAAGTGTGCATGAATGTGGATATACAGGGATCAATCTCGTTGGAAAGCAACGTCGGGCAACAGCAGACTCTCCCGTTGGCTGCTGAAAGTGGTACTTTGGATACTGGGCACTCGGGGACGGGAGATAAGAGGAAGGCCACTTTCAAGCGGCGTCCGCGAGTGATGGATAAGGAAGTCGGCGCCAAGGAGAGCGCGATTGCTGATACTCGAAAGCGCTCTGTAACGGAGGAGATGGTTGTGACCGAAGAACAGAAGAAACAGAATACTCAGGTGGCTGTGAGTGATGACGCTTCCAAGGTCAATTATGATCTGCAGGCAGGATTGGCCGGCCAATCCCGCACAAGATAAATGAAGATAATTGCTTGGAACTGTCGGGGACTTGGGAATGGCCCGGCAGTTCGTGGCCTTCTGGATATCCAGAGGGAGGAGGATCCCGATGTTCTGTTTATTTCGGAGACGAAAAAAGGTGGTAAGTGGATGGAGGGTTTAAGATGGCGGTTGGATATGCCTAACATGTTGGCGAAGGACAGTGAGGGAGCTAGGGGTGGTCTAGCTTTGTTTTGGAAGAAGGGGGTGCAGGTTGATGTGCAGAGTTTTCTCATTACCATATTGATGCCACCATCAAGGATGTGCGTGGGTTTGAGTGGAGGTTCATAGGAATGTATGGGGAACCGAGGAGCGAGGAGAAAGAAAAAACCTGGCGCCTATTAAGGATTCTGTGTGATCGGAGTACCCTTCCCTGGCTATGTTGTGGGGACTTTCATGAAATTTTGTTCAATTGTGAGAAGGAAGGGGGAGCTCCTCGGTCCGAAAGTTGTATGGCCAAGTTTCGATAGGCTTTGGAGGACTGCCAGCTGCATGATCTAGGTTTTGTTGGGGATGCCTTCACGTGGAGGAATCACCATCACCTGGCATCCAACTACATAAAGGAAAGACTTGATAGAGCAGTGGCCAATGGTGCCTGGCGAGCACGCTTCCCGCTTGTTCGCGTAATCAATGGGGATCCGCGCCACTCAGACCATCGTCCGGTCATTGTGGAAACCGGTGCCACTAAAAAGCAACAATGGGGGCAACCTTTGGAGATTATGCAGAAGTTTGAGGCTCGTTGGCTGGAGGAAGAAGAATGCCAGGCTAGAGTGGAGGAAGCGTGGGCGAATGCATTGGAAGGTGGTCAAACTCGGCTAATGGAGATCCAAAGCCGGTCCTGAAGGAATTATGGGCTTGGGACCGCACTGTCCTGGGTGAGTTGAAGAAGAGGGTTAAAAATCTAAGGAAGGAATTGGAGAAGTGCAGGAAGGAGCCAAGCTCTAACCGGGAAGTTAACAGAGAACATGTGTTGCGGTACGAAGTTAGAGCGGCTGCTGGATCAACAACATATTTACTGGAAGCAGCGAGCACATTCTACCTGGTTAACCAAGGGCGACCGGAACACAAAGTTCTTCCACGCCCAAGCATCGGAGAGGAAGAAAAGAAATACAATACAGAAGTTGCAGGATGGCCACGGTGGTTTGGTTGCTGGAAATCAACTAAAAAGCTTCATTTTGAACCAGCACCAACAACTCTTTAGGTCGAATGGGTGCTCTCAGATGGATGCAGTATTACAATGTGTCCAAGCGCGTGTGACCCCGGAGAGGAGAGAAGGCCTTGCTGCTCCTTATCAGAGAGAGGAAGTTTGGGTGGCTTTGAAGGATATGGGGGATTTAAAAGCACCAGGCGCAGATGGTATTCCAGCAATCTTCTACAAAAAATTTTAGTCACTAGCTGGCGATCAGGTGAAGGATGAGGTGCTGGCGGTTCTTAAGTGGTGGGGATATGCCACAGGGATGGAACGATACAGTTGTGGTATGAATACCAAAGACGAAACAGCCGGACACATTGAAAGACTTGAGACCGATCAGTTTATGCAATGTGGCGTATAAAGTGATCTCCAAGGTGATAGTCAATCGGTTGAAAGTTGTGCTGCTGGAAATAATCTCTCCGTCCCAAAGTGCGTTTGTCCCGAGGAGGTTGATCACATACAATGTATTACTGGCATATGAGCTCACACACTACTTGAATCAAAGGAAGAAGGGGAAGAATGGAGTGGCTGCGATCAAGCTGGACATGAGCAAAGCTTACGATAGGGTGGAATGGGATTTCCTGCGACACATGATGCTGAGGTTGGGCTTCCATGATCAGTGGGTTAACTTAGTCATGAAGTGTGTAACTTCTGTGACTTACCGGATCAAGATCAATGGGGAGCACTCAGATCAAATATACCCACAGAGGGGGCTGAGGCAGGGAGATCCACTTTCCCCTTACTTGTTCATTATTTGTGCGGAAGGCCTTTCAGCGCTATTACAGAAAGCACAAGCTGATGGAAAGATAGAGGGTATTAAAGTTTGCAGGGACACGCCAAGAATAAACCATCTCTTTTTCGCCGATGATTCCCTTGTCCTGATGCGAGCTGGCCAGAATGATGCGCAAGAGTTGAGAAGGGTTCTTAACATATACGAAGTGGCATCAGGCCAAGTCATAAACAAGGACAAATCATCTGTCCTCTTCAGCCCAAACACACTTCAGAGTGATAGGATGGAAGTTAGATCAGCGCTATGTATTAATCAGGAGGCAAAAAATGAAAGATATCTTGGCCTGCCTGTCTCTATTGGGAAGTCAAGGAGGAAAGCTTTTGAGTATATTAAGAGGAAGGTGTGGCTCCGGATCCAGGGTTGGCAGGAGAAATTACTATCAAAAGCAGGGAAGGAAATCCTTGTCAAAGCTGTGGCCCAGCTATTCCTACCTATGCGATGTCATGTTTTGATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017987