BGIOSGA018003

From RiceWiki
Revision as of 02:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018003| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018003, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018003

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018003, complete gene.

LocusTag

OSJNBB0048I21.7

Ensembl Transcript ID

BGIOSGA018003-TA

Ensembl Protein ID

BGIOSGA018003-PA

Length

2415

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22385058..22387472

Sequence Coding Region

22385058..22387472

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22385058..22387472 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22385058..22387472 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGGAGCAATGCCGCCGCGGCCGTTCATGATGCCGGGGCCTGGGGGCCCGATGCCCCCGCCGCAGCAGTTCGGCCTGGTGGAGACGCGCCCGCCGCTGGCCGCCGTGCTGCGGCCGCGGTTCAACATCCCGGGCCTCCACCCCTCCGCCGCCGCGGCCTCCGCGGCGGGCAAGATCGCGTCCACCTACGACCTCGTCGAGTCGATGCGGTTCCTCTACGTGCACGTGGTGAAGGCCAAGGACCTCCCCGCCGTCTCCGCCGCCGGCACCATCGACCCCTTCGTGGAGGTGAAGCTCGGCAACTTCAAGGGCACCACGCCGGTCCTCGGCGGCAACCACAACCCGTCGTGGAAGCAGGTCTTCGCCTTCTCCGCGACGCACCTCCAGGCGCACGTGCTCGAGGTGGCCGTCAAGGCCAAAGATCTCGCCGGCGGCGACGACCTCATCGGCCGCGTGGGGTTCGACCTCTCCGAGGTGCCGATCCGTGTGCCGCCGGACTCCCCGCTGGCTCCCCAGTGGTACCGGCTCGAGAACAAGCGTGGCGAGAAGACCCGCGGCGAGATCATGCTCTCCGTGTGGCTGGGGACCCAGGCCGACGAGGCCTTCCCCGACGCCTGGCATTCCGACGCCCATGCGGCGGCCGGCCCGGGGGCCGTCGCCTCCACGCGCGCCAAGGTATACTTCTCCCCCAAGCTCGTTTACCTCCGCGTCGCCGCCATCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACGCCTGCGTCAAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTGAACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTGTTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATGCTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGGTGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGCAAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTACTACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTTGAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACCACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTCAACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACGGTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGATGAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACCCATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGACTTAAGAAGACTGGAGAGTTGCATTTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCACTGTATGGCCGTCCATTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGGCACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGGGAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAGGCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCCCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAGTCTGATATGCTCCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MKGAMPPRPFMMPGPGGPMPPPQQFGLVETRPPLAAVLRPRFNIPGLHPSAAAASAAGKIASTYDLVESMRFLYVHVVKAKDLPAVSAAGTIDPFVEVKLGNFKGTTPVLGGNHNPSWKQVFAFSATHLQAHVLEVAVKAKDLAGGDDLIGRVGFDLSEVPIRVPPDSPLAPQWYRLENKRGEKTRGEIMLSVWLGTQADEAFPDAWHSDAHAAAGPGAVASTRAKVYFSPKLVYLRVAAIGAQDLVPLDASRPANACVKLQLAGQVRRTRPGAPPGTLNPIWNEEFMFVVSEPFDEPLFVTVEDRVGPGRDEPLGRIMLPLNAAMPRHDHFGKPVEPRWYSLARPSDDPDKKEGKFASKIQLRMSLDFGYHVLDESTYYSSDLQPSSKHTRKPSIGILELGILGARNLIPMKGKDGRTTDAYCVAKYGPKWVRTRTILNTLNPQWNEQYTWEVFDPCTVITVVVFDNNQIGKNGDARDESIGKVRIRLSTLETDRVYTHFYPLLALKPSGLKKTGELHLAVRFTCTAWVNMIALYGRPLLPKMHYTQPISVMQLDYLRHQAMQIVAARLSRAEPPLRREVVEYMLDVGSHMFSLRRSKANFYRITSLFCGFAATAKWYDGIRSWRNPITTVLVHMLFLILICYPELILPTIFLYMFMIGLWNYRYKPRHPPYMDTKLCHAEFTNPDELDEEFDSFPSSRPADIVRMRYDRLRSVGGRVQTVVGDLATQGERAHALLSWRDPRATAIFIFLSLVVAIVLYVTPFQVLLVIAMLYLLRHPRFRSRMPSVPFNFYRRLPAKSDMLL</aaseq>

Gene Sequence

<dnaseqindica>1..2415#ATGAAGGGAGCAATGCCGCCGCGGCCGTTCATGATGCCGGGGCCTGGGGGCCCGATGCCCCCGCCGCAGCAGTTCGGCCTGGTGGAGACGCGCCCGCCGCTGGCCGCCGTGCTGCGGCCGCGGTTCAACATCCCGGGCCTCCACCCCTCCGCCGCCGCGGCCTCCGCGGCGGGCAAGATCGCGTCCACCTACGACCTCGTCGAGTCGATGCGGTTCCTCTACGTGCACGTGGTGAAGGCCAAGGACCTCCCCGCCGTCTCCGCCGCCGGCACCATCGACCCCTTCGTGGAGGTGAAGCTCGGCAACTTCAAGGGCACCACGCCGGTCCTCGGCGGCAACCACAACCCGTCGTGGAAGCAGGTCTTCGCCTTCTCCGCGACGCACCTCCAGGCGCACGTGCTCGAGGTGGCCGTCAAGGCCAAAGATCTCGCCGGCGGCGACGACCTCATCGGCCGCGTGGGGTTCGACCTCTCCGAGGTGCCGATCCGTGTGCCGCCGGACTCCCCGCTGGCTCCCCAGTGGTACCGGCTCGAGAACAAGCGTGGCGAGAAGACCCGCGGCGAGATCATGCTCTCCGTGTGGCTGGGGACCCAGGCCGACGAGGCCTTCCCCGACGCCTGGCATTCCGACGCCCATGCGGCGGCCGGCCCGGGGGCCGTCGCCTCCACGCGCGCCAAGGTATACTTCTCCCCCAAGCTCGTTTACCTCCGCGTCGCCGCCATCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACGCCTGCGTCAAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTGAACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTGTTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATGCTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGGTGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGCAAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTACTACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTTGAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACCACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTCAACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACGGTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGATGAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACCCATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGACTTAAGAAGACTGGAGAGTTGCATTTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCACTGTATGGCCGTCCATTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGGCACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGGGAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAGGCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCCCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAGTCTGATATGCTCCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018003