BGIOSGA018024

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Revision as of 02:28, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018024| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018024, complete gene.| tag = OsI_200...")
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Gene Name

BGIOSGA018024

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018024, complete gene.

LocusTag

OsI_20029

Ensembl Transcript ID

BGIOSGA018024-TA

Ensembl Protein ID

BGIOSGA018024-PA

Length

3745

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22063247..22066991

Sequence Coding Region

22066593..22066991,22066144..22066268,22065406..22066085,22064899..22065116,22064370..22064593
,22063247..22063823

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22063247..22066991 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22063247..22066991 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGCAGGAGCTCGCGGCTGGACGCGGCGGACGCGTCGCCGGTGGCCGCGCTCTGCCGGGAGCGGCGGGACCTGCTGCGCGCGGCGGCGGAGCGGCGCGCGGCGCTGGCGGCCGCGCACGCCGCCTACTTCCGCGCGCTCCCGCGCGTTGCGGACGCGCTCGCGCGGTTCGCGGAGCAGCACCACGCCGCCACGCCGCCGGGGTCGCCCGTGCTCACGCTGCCCCCGTCCGAGCCGGACGAGCACAAGAAGCGGAGCGCCTCCTCCTCCACCCTGCACACCGACTCCGGCCACTCCCACCTCCACTTCCACACCGACGGCGGCTCGGACTCCGAGCCCAACTCCGCCGACGACGACTGCGCCTGCGGCGCCGCCGCCGGCGCCGCCGGCCACGGCGCTGTCAAGAACCTTGGCCTCTGGGGCCTTTTCACCCGCGGCCTTCCTCTTCGCATCCTCATGATCGGTATACTGACTGGAACTCAGTGGGTGATCTATGATTCTTTCAAAGTTATGGTTGGCCTGATTTCTAAGAGATTGTATAATTTTACAGGCCCGCCGCCGATGCCAATGCCGGAGGTCTCGCCCTGGGACTTCTTCAACCCGTTTGACTCCTACGACTACAACCAGCAGCTTCCGCAGTACAAGGATGCCAATGGATCGTTCACGAGTAGCCCCAACTCGAGCGAGGTGAGGGAAAGGGAGGGGATACCGGAGCTGGAGGAGGAGACCGAGCAGGAGTCGATGAGGGAGTCGATCAAGGCGAGGAAGGCGGTGGAGAGCACCGCGTCCACCCGGATTGACAATGCCGATGCAGTGAATGCCAAGGCGAAGACGGCGTCGATGGAGCACAAGGAGTGCGAGATCGAGAGTGTGGGGAGTGCTTCGGTTCTTGATTCTGGAGAGGAGAGTGTGTGCAGCTGTGAATGTGATCATGCCGATGGCAATGCCGGAGCAGGAGCAGCAACTGCGGCGCCGGCTGGAGATGATCCAAGGATGGTGAAGAAGGTGGCCTCAGAGGAGCACTCGTCCATGGTAGTGGCTGAAGATGTGCTGCCGAAGAACTTCGGCACAAGGGATGTTGCAGATGTTGTGAATGAGATAAAGGAGCAGTTCAACTATGTGGTCGCCTGTGGAGACGATGTTGCTAGGATCCTTGAGGTCGGAAGTATGCGGTACCGGCCTCGGAGAAGAATTGTGAGATTGGTATTTTCGCGGTTGATGGGGGCCTTTGCCTTGTTGTTTTCTTCTGTATCTGAGCCCCCTGTGGAGAATTTGGAGCAGACAGCATTAAGTGCATCTGGAAGAAATCATAATTCGAGTCAAAGAATTGGTAGTGCCAGTGATATTGAGTTTAATACTCTTTCTTCAGTAATGGATAGGTTGTACGTGTGGGAGAAGAGGCTTCATAAGGAAATTATGGAGGAAGAAAAATTGAGGATCACATATGACAAACAATGGAAGCGCCTGAAAGAGTTGGACGACAATGGTGCAGAACCATATAAAATTGATTCTACACGGGCCTCAATTAGTACACTGCTCACCAGAATCAACATTACAATTAGATCAGCCAAAGTTATTTCTAGGAGGATTCACATACTACGAGATGATGAGCTACATCCACATCTTGTTAAACTTATTCAAGGGCTTGTGAGAATGTGGAAATTCATTCTTGAATGCCATCGGAAGCAATTTCATGCCATACTCGAAACTAAATCTCATGTTCTTATCCCTAAGAATGGGCCAGAAAGGAACTCCAAGATTACATTCGAACTAGAAATGGAACTTTTGAACTGGTGTTCCTGTTTCAGCAATTGGATCCTGTCACAAAAGGCTTATATTGAAACTCTCAATGGCTGGTTAGTCAAATGGCTTCCTGAGGAAAAGGAGGAAACACCTGATGGGATCGCACCGTTTTCTCCTGGTAGGCTTGGAGCTCCAGCTGTGTTCATCACAGCTAATGATTGGTGTCAAAGCATGAAAAGGATACCAGAAGGTACTGTCATAGGTGCAATGGAGGCTTTCGCTGTTAATGTGCACATGTTACGGGAGCGGCAGGACGAAGAGCAGCAACAGAAGCTGAAAGCTGACTATTATCTAGAGATTATGCAAAGAGGCTCAAATCTTTTCAAAAGGAACATGGCTTGGCTGGACATCATGAAGCTGATAAGACGGTGTTGCCTGTTGCCGAAAATAACAGAGCAGTTGATAGCCGCATGGTAG</cdnaseq>

Protein Sequence

<aaseq>MGCRSSRLDAADASPVAALCRERRDLLRAAAERRAALAAAHAAYFRALPRVADALARFAEQHHAATPPGSPVLTLPPSEPDEHKKRSASSSTLHTDSGHSHLHFHTDGGSDSEPNSADDDCACGAAAGAAGHGAVKNLGLWGLFTRGLPLRILMIGILTGTQWVIYDSFKVMVGLISKRLYNFTGPPPMPMPEVSPWDFFNPFDSYDYNQQLPQYKDANGSFTSSPNSSEVREREGIPELEEETEQESMRESIKARKAVESTASTRIDNADAVNAKAKTASMEHKECEIESVGSASVLDSGEESVCSCECDHADGNAGAGAATAAPAGDDPRMVKKVASEEHSSMVVAEDVLPKNFGTRDVADVVNEIKEQFNYVVACGDDVARILEVGSMRYRPRRRIVRLVFSRLMGAFALLFSSVSEPPVENLEQTALSASGRNHNSSQRIGSASDIEFNTLSSVMDRLYVWEKRLHKEIMEEEKLRITYDKQWKRLKELDDNGAEPYKIDSTRASISTLLTRINITIRSAKVISRRIHILRDDELHPHLVKLIQGLVRMWKFILECHRKQFHAILETKSHVLIPKNGPERNSKITFELEMELLNWCSCFSNWILSQKAYIETLNGWLVKWLPEEKEETPDGIAPFSPGRLGAPAVFITANDWCQSMKRIPEGTVIGAMEAFAVNVHMLRERQDEEQQQKLKADYYLEIMQRGSNLFKRNMAWLDIMKLIRRCCLLPKITEQLIAAW</aaseq>

Gene Sequence

<dnaseqindica>1..399#724..848#907..1586#1876..2093#2399..2622#3169..3745#ATGGGGTGCAGGAGCTCGCGGCTGGACGCGGCGGACGCGTCGCCGGTGGCCGCGCTCTGCCGGGAGCGGCGGGACCTGCTGCGCGCGGCGGCGGAGCGGCGCGCGGCGCTGGCGGCCGCGCACGCCGCCTACTTCCGCGCGCTCCCGCGCGTTGCGGACGCGCTCGCGCGGTTCGCGGAGCAGCACCACGCCGCCACGCCGCCGGGGTCGCCCGTGCTCACGCTGCCCCCGTCCGAGCCGGACGAGCACAAGAAGCGGAGCGCCTCCTCCTCCACCCTGCACACCGACTCCGGCCACTCCCACCTCCACTTCCACACCGACGGCGGCTCGGACTCCGAGCCCAACTCCGCCGACGACGACTGCGCCTGCGGCGCCGCCGCCGGCGCCGCCGGCCACGGCGTCCGAGGCGAGATCTCGCCGCCGGCGGAAGAGCTCCAAGAACGGCGAATCCCGGAGCCCGGAGCATCGTCCAGGCTGCAAATGCCGTGGGAGTACGCTCCCTACGACCCCTACCCTTCCTCCTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCAACAACTCCAAGGGCGCCACCGTTGGAGATGTAAGTCTGCACCCTGTAGAACGGCACAGCCGGGAGCTATACTTGACTTGATGCGTTTTGCCAATGTGTGATTGTTTTGTGTTCGTTTGCTGAATTCTTATTTCTTTTCAGGCTGTCAAGAACCTTGGCCTCTGGGGCCTTTTCACCCGCGGCCTTCCTCTTCGCATCCTCATGATCGGTATACTGACTGGAACTCAGTGGGTGATCTATGATTCTTTCAAAGTTATGGTTGGCCTGTAAGTCTATCTGAACTTCTGCACGGTATTTTCTCTTACGGGGAACACTTCTTTGTAGGATTTCTAAGAGATTGTATAATTTTACAGGCCCGCCGCCGATGCCAATGCCGGAGGTCTCGCCCTGGGACTTCTTCAACCCGTTTGACTCCTACGACTACAACCAGCAGCTTCCGCAGTACAAGGATGCCAATGGATCGTTCACGAGTAGCCCCAACTCGAGCGAGGTGAGGGAAAGGGAGGGGATACCGGAGCTGGAGGAGGAGACCGAGCAGGAGTCGATGAGGGAGTCGATCAAGGCGAGGAAGGCGGTGGAGAGCACCGCGTCCACCCGGATTGACAATGCCGATGCAGTGAATGCCAAGGCGAAGACGGCGTCGATGGAGCACAAGGAGTGCGAGATCGAGAGTGTGGGGAGTGCTTCGGTTCTTGATTCTGGAGAGGAGAGTGTGTGCAGCTGTGAATGTGATCATGCCGATGGCAATGCCGGAGCAGGAGCAGCAACTGCGGCGCCGGCTGGAGATGATCCAAGGATGGTGAAGAAGGTGGCCTCAGAGGAGCACTCGTCCATGGTAGTGGCTGAAGATGTGCTGCCGAAGAACTTCGGCACAAGGGATGTTGCAGATGTTGTGAATGAGATAAAGGAGCAGTTCAACTATGTGGTCGCCTGTGGAGACGATGTTGCTAGGATCCTTGAGGTCGGAAGTATGCGGTACCGGCCTCGGAGAAGAATTGTGAGATGTGAGTATATGCTTTTCTTTTCATTTCATTTGATTGCTATGCACATATTGCACTGCAAGAAAATTCTGAATACTAGCAGCATCAGACTCCAATGCAAGATCAAGTCCACTTATAACTAATAAGTTAGCACTGACAAATAGTACTACATTAAAGAGATCTTGTGTAGCGTATGTGCTTTCTTCTGATTGTATTGATCTGTTGACACGATTTCTTGCCCACCTTCCTTTCACATTTTCTCCAGAGACAGTTCTTACTCAGTTAAACACTTTGTCACTTATACTTGATGCAGTGGTATTTTCGCGGTTGATGGGGGCCTTTGCCTTGTTGTTTTCTTCTGTATCTGAGCCCCCTGTGGAGAATTTGGAGCAGACAGCATTAAGTGCATCTGGAAGAAATCATAATTCGAGTCAAAGAATTGGTAGTGCCAGTGATATTGAGTTTAATACTCTTTCTTCAGTAATGGATAGGTTGTACGTGTGGGAGAAGAGGCTTCATAAGGAAATTATGGTATGGTACTTTAGTTATAAGAAATGTCTTGATAAATTCTTGTTACTCTCAAAACATACAAATCACAAGGCTGATAATGGTCTCCTATACTTTTATGTAATATTCTTCATCTGTCAAAATTGTTTTCTCAAAATGCACTGCTTATCTTGATATAATTAAAAGGGTCCTATTGTGGTGTTGAATTTATTTTGCTGCTGAATTACTCATAAAAAAAGAAATTGCTGCTGAATGATAGAGTGACACTTGCTCGTGACTTGCATTTTTCATGAGCATCGCATTTACAGTTTGTTTAAATTAATTGTCAGGAGGAAGAAAAATTGAGGATCACATATGACAAACAATGGAAGCGCCTGAAAGAGTTGGACGACAATGGTGCAGAACCATATAAAATTGATTCTACACGGGCCTCAATTAGTACACTGCTCACCAGAATCAACATTACAATTAGATCAGCCAAAGTTATTTCTAGGAGGATTCACATACTACGAGATGATGAGCTACATCCACATCTTGTTAAACTTATTCAAGGGTATGAAAAGTATATTTCTACACTTTTCTACTCAAGTGATTCTTCAAAGGGATCAACCATCAAATAGTCACTGTGTCATTACACCCGCCTACCCTTGTTTTCTTGCAGAGAATTTTTTTTAAGTACTTATTTTTTTTCTTTAGTTTATCTTGCATTCTTTATGTTGCAATATCACTACTGCATGCTGCAATGGTTTCATAGTCATTTGATCCATTGAAACATGTCCTGAAATTAGCTAGTCAATATAATGTATATCATATCATTAAACTTTTTTTAAGCAAAATAGCTATCACATTAATAAAATTAGTTAATGCTAGGATATCTTTAGTTTAGGAAGTCCAGTTGTCTTTTGGAAAGCACATTTGTCTTGCTAGCAAATGTAGCCTCTCATGTGTCTTTCTTTGTTGCTGTTTGTGTCTGAGCTTATATTCTTGGGAGATAGATATTGCCTTCATAACAATTTATTTCCTCTGCACGGCTTCCAATACTTGTCACAAAGCTGATTTATCTGTGAACAGACTGTAAACTGTTGTCGTTCTGATGTAGGCTTGTGAGAATGTGGAAATTCATTCTTGAATGCCATCGGAAGCAATTTCATGCCATACTCGAAACTAAATCTCATGTTCTTATCCCTAAGAATGGGCCAGAAAGGAACTCCAAGATTACATTCGAACTAGAAATGGAACTTTTGAACTGGTGTTCCTGTTTCAGCAATTGGATCCTGTCACAAAAGGCTTATATTGAAACTCTCAATGGCTGGTTAGTCAAATGGCTTCCTGAGGAAAAGGAGGAAACACCTGATGGGATCGCACCGTTTTCTCCTGGTAGGCTTGGAGCTCCAGCTGTGTTCATCACAGCTAATGATTGGTGTCAAAGCATGAAAAGGATACCAGAAGGTACTGTCATAGGTGCAATGGAGGCTTTCGCTGTTAATGTGCACATGTTACGGGAGCGGCAGGACGAAGAGCAGCAACAGAAGCTGAAAGCTGACTATTATCTAGAGATTATGCAAAGAGGCTCAAATCTTTTCAAAAGGAACATGGCTTGGCTGGACATCATGAAGCTGATAAGACGGTGTTGCCTGTTGCCGAAAATAACAGAGCAGTTGATAGCCGCATGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018024