BGIOSGA018025

From RiceWiki
Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018025| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018025, complete gene.| tag = OJ1212_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018025

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018025, complete gene.

LocusTag

OJ1212_B02.12

Ensembl Transcript ID

BGIOSGA018025-TA

Ensembl Protein ID

BGIOSGA018025-PA

Length

3206

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22053457..22056662

Sequence Coding Region

22056506..22056662,22055674..22055730,22055491..22055581,22055210..22055370,22054973..22055100
,22054734..22054871,22054489..22054581,22053681..22053786,22053457..22053602

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22053457..22056662 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22053457..22056662 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGGGGCGAGGCTGGGAAGATGGGTGGAGGGGATGTCGGCGGACAACGTCAAGGGCCTCCTGCTGGCGCTCTCCTCCAGCCTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGCTGGCGCCTCCGGCGTCCGCGCAGGTGTTGGTGGCTACTCTTACTTGCTTGAACCATTGTGGTGGGCAGGAATGACAGCAATGATTGTTGGAGAAATCGCCAACTTCGCAGCTTATGCTTTTGCTCCTGCTATCTTGGTCACTCCACTTGGTGCACTTAGCATAATTATCAGTGCTGTTCTTGCACACATTATTCTGAGAGAGAAGCTACACATATTTGGTATACTCGGGTGTATTCTTTGTGTTGTGGGTTCGACAAGTATTGTGCTTCATGCCCCTCCAGAGCGTCAAATTGAGTCTGTGGCAGAAGTATGGGATCTAGCTACTGAACCAGCATTTCTACTATATGCAGCCATTGTGCTTGCAGCAGCTTTTGTGCTCATATTCCATTTTGTCCCACAATATGGTCAGACCCATATCATGGTGTATATTGGTGTCTGTTCTCTCGTGGGATCCTTATCGGTCATGAGTGTCAAAGCTCTTGGGATAGCATTGAAGCTGACATTTTCAGGGATGAACCAGCTTGTTTATCCACAGATGTGGGTGTTCTTACTTTTTGTAGTTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGCCCTTGACACTTTCAACACTGCAGTGGTTTCGCCCATATATTATACGATGTTTACATCCTTGACCATTTTGGCCAGTGTGATAATGTTCAAGGACTGGGATCGTCAAGATCCAACACAAATTGTCACGGAGATGTGCGGTTTTGTTACAATCCTTTCTGGGACATTTCTTCTTCACAAGACAAAGGATATGGTGGATGGTCTCCCACCAAATTTACCTATCCGACTACCTAAACACGCCGAGGAGGATGGTTATGCTGCTGAAGAAATGCCTCTCAGATCTGCTGCTGATGGCATTCCACTCAGGTCACCGAGGGCCACGGAATCGTTTCGTGCGACATTATAA</cdnaseq>

Protein Sequence

<aaseq>MGGARLGRWVEGMSADNVKGLLLALSSSLFIGASFIVKKKGLKKAGASGVRAGVGGYSYLLEPLWWAGMTAMIVGEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGSTSIVLHAPPERQIESVAEVWDLATEPAFLLYAAIVLAAAFVLIFHFVPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLHKTKDMVDGLPPNLPIRLPKHAEEDGYAAEEMPLRSAADGIPLRSPRATESFRATL</aaseq>

Gene Sequence

<dnaseqindica>1..157#933..989#1082..1172#1293..1453#1563..1690#1792..1929#2082..2174#2877..2982#3061..3206#ATGGGCGGGGCGAGGCTGGGAAGATGGGTGGAGGGGATGTCGGCGGACAACGTCAAGGGCCTCCTGCTGGCGCTCTCCTCCAGCCTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGCTGGCGCCTCCGGCGTCCGCGCAGGTGCGTGACGTGACTCTCACCCACCTCCACCTCCGCCTTCCGCTTAACCCCTTCTCAGCTCGCAACCCAAGCGAATCGCAGGGATGCCCACGCTCTCCTCTGCTGCTGCTGCTGCTGCTGCCGCGGTGCTAGCTCTGTAGCGTAGATCTGAGCCCCGCGAGATTTGGATCTTGATCGTGTTGTCGGTGGCCAAGTGGTGTTAGGGAGTTTGGTGCTGCACGCGCATTGGAGATCGGGCTGTCGGTTAAGCCTGTAGTTGTCTGGGTACTAAGAAATAGTTGTTCTTGTAGGACTAGCTCAGTTGATGATGATGTTCCAGCAAGATGATTAATAGAGTAATAGTACAATAGTAGCAATTGTTATAGTTCATGGCGCAGTGGTGATATCACGATGTGCAATATCCCCTCTTGTTTATAATGTGACTGCATTGCGATTCGTTATCTATGGTTTCTACGTCAAAATTAGCAGTTTGAACAAGCTTACACAAACATGGAAGGCTGTAGAATATAAAATCTTTGACGGTAGAAGGAGGAGCCTATGATTGCAGAAATGGTTGCAAGCAGAAAAAAAAAAAACTACTATGTGATTGCTGTTGCTCTATTTGTTGCCTTTTTGTGCTTTAAACTTCCATGGATGATCAATCCGCGTTGTGTAATTGGTCTCCCATGATATGTTGGTTAGTCACGGAAGTACCATATTGGGAATTTTGCTACCCTCTGGCCAAATGGGTTTCAGCTTTTTCAGTAATTATGCTTATGTTGTTGACTTGCTACAGGTGTTGGTGGCTACTCTTACTTGCTTGAACCATTGTGGTGGGCAGGAATGACAGCAAGTAAGTGGTTTCTTCATGCATGAATATACTGGTTGACAAAGTTCTTCCATCTGTGGTGATAGTGCTAATTGATGTACTATGCTTTTTGTCAGTGATTGTTGGAGAAATCGCCAACTTCGCAGCTTATGCTTTTGCTCCTGCTATCTTGGTCACTCCACTTGGTGCACTTAGCATAATTATCAGGTAAGACTAGAATTGTATGACTGAAGTGGTATGGTAAAATCTTCTTCTGTGCATATTCCTGTAAATCTTCTTCTGTGTATATTCCTGTAAATCTGATAATATCGGCATCCCTTCTTACAGTGCTGTTCTTGCACACATTATTCTGAGAGAGAAGCTACACATATTTGGTATACTCGGGTGTATTCTTTGTGTTGTGGGTTCGACAAGTATTGTGCTTCATGCCCCTCCAGAGCGTCAAATTGAGTCTGTGGCAGAAGTATGGGATCTAGCTACTGAACCAGGTATAATCCTACCATGTACACAAGATAATAATATAACAAATATTAGAAAATAGTGACTCATTTAGACATTGGTTTTTCAAGTACTAATATTTAAACCTTTATGTTCCAGCATTTCTACTATATGCAGCCATTGTGCTTGCAGCAGCTTTTGTGCTCATATTCCATTTTGTCCCACAATATGGTCAGACCCATATCATGGTGTATATTGGTGTCTGTTCTCTCGTGGGATCCTTATCGGTATGCATGTCATTAATAATTCTTGATACGTTTTCACAATATCCTTCTTAGTCGGTTTACGGTGTAAATGAATTCATTCTGTAAACTTCTTTCTCTGGCAGGTCATGAGTGTCAAAGCTCTTGGGATAGCATTGAAGCTGACATTTTCAGGGATGAACCAGCTTGTTTATCCACAGATGTGGGTGTTCTTACTTTTTGTAGTTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGTATGATCAATATCTATGTTGTAGGATAATTTTGGGCATGCCAAGAGAAAAAAATAAATGATGAATAGACTGATTTTGTTTTTCTATATGGAAGTCTTGTACATTTGTCTTCTACTCTATACGACTTTGAATTTGACTGTTTACTTTTGCAGGCCCTTGACACTTTCAACACTGCAGTGGTTTCGCCCATATATTATACGATGTTTACATCCTTGACCATTTTGGCCAGTGTGATAATGTTCAAGGTAACAGGTTTTGGGCTTAATTTATTTGTTGACATAATTTTAATACAAACACCATGTAGCTGCCTTCTTAAAAGGTGATGGCGACACTATAAACTATTGTACTGATTTTGTTTAATATGGCAATATGTCAATATACCAGAAGTATACTTAATTCTTTTTAATGAATTTTCTGCTTGAATGGAAATCAATCTTTTATACATTGTGTATCGATAGCGCAGTTTGGCATATCAAATTAACTCTTGACTTATCCTTCTGGACTATTTTCAAAAACATGTTGGGACCTTTGGCATTCAGTTTTTGACCATGGCCATTGAACTTTCTGTTCCATCTTCCTAGATGACCACCCATCATGTTTCCTTGCTGCATCAACTGCCGCCTTAATGTGATACTGTAGCTGTTTGATATTCAATTACACTTAAATATCCTGATTGATGTTCAAACTCCTCTTATATGGGGCCCATATATCTAAAAATGTTCTCTAATCTGAATAGGACATGCAGGCCTGTCAGTATACATGTAAACATAACATTAACATTGAAAGGCCTTTCATACTACAATGAATTTCTGAATCATGATAATGCTATAAATTCTATCGGCAAACTGTATCATCAGAATGGCGCATCATGGTTCAGTCAACCCCTTATTGTGTTCCATTGACAATGCTTCTGAACTATCTGTTGATGCAACCCTGATTGCATGCAGGACTGGGATCGTCAAGATCCAACACAAATTGTCACGGAGATGTGCGGTTTTGTTACAATCCTTTCTGGGACATTTCTTCTTCACAAGACAAAGGATATGGTGGATGGTATGACTGCCTTTCGTCCCATCTTGTGTTGACTTGAAATAGCACCCATTGGTAAATTCTTATTCATTGCCATCGCAGGTCTCCCACCAAATTTACCTATCCGACTACCTAAACACGCCGAGGAGGATGGTTATGCTGCTGAAGAAATGCCTCTCAGATCTGCTGCTGATGGCATTCCACTCAGGTCACCGAGGGCCACGGAATCGTTTCGTGCGACATTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018025