BGIOSGA018030

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Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018030| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018030, complete gene.| tag = OS05G04...")
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Gene Name

BGIOSGA018030

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018030, complete gene.

LocusTag

OS05G0422600

Ensembl Transcript ID

BGIOSGA018030-TA

Ensembl Protein ID

BGIOSGA018030-PA

Length

6109

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21948072..21954180

Sequence Coding Region

21954145..21954180,21953549..21953626,21953353..21953445,21952693..21952769,21952069..21952453
,21951696..21951795,21951482..21951594,21951018..21951104,21950172..21950294
,21949903..21950043,21949514..21949561,21948072..21948485

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21948072..21954180 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21948072..21954180 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAATAATCTATCAGTGGCGGAAGAAGGTCAAACACATCCTACAGAAAATGACTGCGCACAATCAAATCGGTTCAATTCAGTTATTGAGAAAATTGAGCGCCTTTACATGGGCAAAAATAGTAGTGATGAGGAAGACTTGGATGATGCGCCTGATGATGATCAGTATGACACAGAAGATTCGTTTATTGATGATGATGAATTGGATGAATATTTTGAAGTTGACAATTTTGCAACCAAGCACAATGGTTATTTTGTGAACAAAGGAAAATTGGAACAAATTGACTTTGATTCAGTACAGACTGTTGAACCAAAGAAACAAAGACGAAAAGATTCATCAAGTTCTTATATTGAGAATAACAAGGAATTTGCTCCAGGCTCTTCCTCATACATGGGCACGCCTTTAAGAGACTCTAAAAGAAGCACTCTCCAAACGGGGAAGAGTACTATTAATGGTCACAAATCTGGAGCTAATGGAACATTTGAGTACCCTTATTCAGCATACCGAGACAAGGATGCTCCAGGACATCTTGGCCTCCAACAGAAAATAACTTCTAATGGGGCGAACCAAGATTTGTCAAAGAACATGCACCACAAAGAGAAATATAATGCTGGTCAATTTTCTGGTTTGCATGCTTCCAGTAACATCTATTCAACAGAAACAATGCACTTGGCCACAAAAATCCATACAGAAGGTTCAGGTACCAAGACCAAGGGTACCAGACTTGAGCGAGCTATCCGTGACCTCCAAAACATTGTCACTGAATACAAACCACAGATTCTTGATGTACATGAGGCTGAGGCAAATTGCCAGGTAGCAGTTAAAAGAAGATTGCCACAAGAAGTAAAACAAAAACTTGCTAAGGTCGCAAGGTTATCGGCAAATCAAGGAAAAATACCAGAACATGAGCTGATCAATCGCCTCATGGGCATAGTTGGCCACCTTGTGCACCGTAGGACACTGAAGAGAAACATGAAAGAAATGGTGCAATCAGGTTTATGTGCTAAACAAGAGAAGGCTGGGAAATTGCAACAAGTGAAAATGGAAATCTATGAAATGGTCAAAGCACGTCTAGCCACCAAACCTAAGGGTGCTGAACATAAGGTTGAATCTATAGATGGCTTTCAGGATCCTGTTACTCATGATGACAGAATGGCCTTGAGAGGAAAATCTGTCATGGATGCTGTATTGGAGGACAGGATCTGCGACCTGTATGATCTGTATGTTGAGGGTATGGATGAAGATAAGGGCCCTCAGAGTCGTAAGTTGTATCTAGAGGTCCGCAATGACCAGAGGATGAAGAGAAGGCTGGCTGCTGCTGCCAAGTTGCGTGACAGCGACCCTGCCGCCCCACAATCTGCACAGTCCCTGCAAAATATGACAAGCACCCATACCATGTATCCTGTGGTTAACAATGGAAATAGTCAGAGTAGCAGAAGTGTCGACAAAGTTAATGAAATGAGCGTCGGTGCAGGATCGGATGGCAACAGGAGTTCTACCAGCATGAAGAAACGAAAAATAGACTCCGAAGATAGGCAAGTTAACCCACCGAAGGCTACTGCTGAACTTCATCATCATGGTATTGAAATACAGAAGCCGGCAAAGCGTGCAGATGAGGCAACAAAGGTCAGTAACCTTCCCCAGACGCTGCTTGCCATTCCAAGCAGCGACAGTCGCCCCAGCAGCAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MGNNLSVAEEGQTHPTENDCAQSNRFNSVIEKIERLYMGKNSSDEEDLDDAPDDDQYDTEDSFIDDDELDEYFEVDNFATKHNGYFVNKGKLEQIDFDSVQTVEPKKQRRKDSSSSYIENNKEFAPGSSSYMGTPLRDSKRSTLQTGKSTINGHKSGANGTFEYPYSAYRDKDAPGHLGLQQKITSNGANQDLSKNMHHKEKYNAGQFSGLHASSNIYSTETMHLATKIHTEGSGTKTKGTRLERAIRDLQNIVTEYKPQILDVHEAEANCQVAVKRRLPQEVKQKLAKVARLSANQGKIPEHELINRLMGIVGHLVHRRTLKRNMKEMVQSGLCAKQEKAGKLQQVKMEIYEMVKARLATKPKGAEHKVESIDGFQDPVTHDDRMALRGKSVMDAVLEDRICDLYDLYVEGMDEDKGPQSRKLYLEVRNDQRMKRRLAAAAKLRDSDPAAPQSAQSLQNMTSTHTMYPVVNNGNSQSSRSVDKVNEMSVGAGSDGNRSSTSMKKRKIDSEDRQVNPPKATAELHHHGIEIQKPAKRADEATKVSNLPQTLLAIPSSDSRPSSS</aaseq>

Gene Sequence

<dnaseqindica>1..36#555..632#736..828#1412..1488#1728..2112#2386..2485#2587..2699#3077..3163#3887..4009#4138..4278#4620..4667#5696..6109#ATGGGAAATAATCTATCAGTGGCGGAAGAAGGTCAAGTTATGAAGACTTGTTTCTCAAAAACGATAAGATCTCAAGACTTGCTACTTATGTGACCATATGTAAGAACTACAAATGCCATGCAAACTTTGTTAAGCTTTTATTCTGTTGGTAGAATCAATATAGCAGGTCCGTTTTGATGACAAACCAGAATTATGGAAGGGGTTTACGCATACACTAGTGCATTGTCTTGCAATGATGCAACAATGATATATTAATTCCTCGAAATTGTCTGGTAAGATGATTAATGTAAACTGGAATACTATACAAGCAAGATGTGTCATTTGTAGGCAATAATTCCTATATTTTGTTGGAACTTGTATCAGACATTCTGATAGGTGGTGGTTGTGCTTACTCATTTGCAGGCGGTCATTACCCTTACCCATTTGTTGAATTAAATCAGCCTAACTTGTGGTTGTCTTCACATATGATTGCACAGATCAACTAGTTTTTTTTTTATTGAAATTGAAATAATGTACTGTATTTGAAATAATGGCCATTCCATCTTTTGAATCAGACACATCCTACAGAAAATGACTGCGCACAATCAAATCGGTTCAATTCAGTTATTGAGAAAATTGAGCGCCTTTACATGGTAAGAAACATATGGTGTTACTATCAGAGAGGAAATTCATTTTTACTTTCCATTATGCACACGAAAAGTGCTTACCTCTGTCTACATCCTTTTACTATGCCAGGGCAAAAATAGTAGTGATGAGGAAGACTTGGATGATGCGCCTGATGATGATCAGTATGACACAGAAGATTCGTTTATTGATGATGATGAATTGGTTAGCTTTTCAATTTAATTGATATAATAATGCTCTAATGTATTGTTAATAAAATGTTCTTTTTCATTGGCTCATCTGACCTAAACAGTGTTAATACTGACATTGTAGTGCTTTGAGTTAAGCTTGTTACTATTTGTTTTGCCATGCATTCTGCATATGTGCTACTATCCTGTTATATGTATCATAAATAACAGCCTTGACTTCTTGGCTACCATTCCATATGCCAAATTTGAAGAACAGCTGAGAATGGCATGCTCTTATAATCTTTCTTTTTTCATTGAGCTATTTTTCTAGTGTTAGGAAGAATGAGGGTTTATTATCTTGAATTCAATATGGTACTTCACTCAAGTTGCAACAAGAAAAACTGCTACTTTGTGCAAAACCAGAATGATCTATATGGCTGGAAGAACTTAACTACCGACACTAATTTATATGCAAACCAAATGTGAGCTTACATGCTTCTTGCTGCATATATCTAGCCTTGTTTAGAACATCTCAATGATTCTTTTTCTGTATCATTACCATTTGACATGCTGAGAATGATAGCCAGTGTTCTGATCACTCTGTTGTTTTTTATCCACAGGATGAATATTTTGAAGTTGACAATTTTGCAACCAAGCACAATGGTTATTTTGTGAACAAAGGAAAATTGGAACAAATGTAATTTTCCTAAAAACTCTTTAATTTGCAGCTATGGTGTTGGGCAAGTTATGCATAAAATAATCCCACCAAATGATTCTAGAAGGCATTGTGCGGTGTCATGACTAGCTATTCAGAATGATATCATGTGGGATGTTATAACATAATAACAGTAATCTTTGCATCAGTGCCAACATGCATTACATATCTGCTGTTATAGGATGACATAAATCTTGACATGCTTCCACCCACTTTTGCAGTGACTTTGATTCAGTACAGACTGTTGAACCAAAGAAACAAAGACGAAAAGATTCATCAAGTTCTTATATTGAGAATAACAAGGAATTTGCTCCAGGCTCTTCCTCATACATGGGCACGCCTTTAAGAGACTCTAAAAGAAGCACTCTCCAAACGGGGAAGAGTACTATTAATGGTCACAAATCTGGAGCTAATGGAACATTTGAGTACCCTTATTCAGCATACCGAGACAAGGATGCTCCAGGACATCTTGGCCTCCAACAGAAAATAACTTCTAATGGGGCGAACCAAGATTTGTCAAAGAACATGCACCACAAAGAGAAATATAATGCTGGTCAATTTTCTGGTTTGCATGCTTCCAGTAACATCTATTCAACAGAAACAATGGTAAGAATCAAGGAAACTGGTATTGTGACTTGTGAGCATGGTGCAAACCATAGTTATCTTTTCATCCCCAAAGTACATGGCACTAATTTATTCAGCACAAAAGCATTACAACATAAGACATGGAAGTAAACAGAGAAAAACTGCTACACGCATATGCAGCATGTTTAGTAAGTGTCATGAAATGTGTTGTCTGTCAACTGCTATAATTCTGTCGAGACAATTATGCCCTAATTTATGGGACAATTGCTCAATATTCTATATTTGCATTTTCAGCACTTGGCCACAAAAATCCATACAGAAGGTTCAGGTACCAAGACCAAGGGTACCAGACTTGAGCGAGCTATCCGTGACCTCCAAAACATTGTCACTGAATGTGTGTATCTTATTATTAAACCTTATATATCATGGTGGATATATTTCTAAGCCCCTTTTGGAATTAACTTTGGCTTTTGTTGCGTGGAATCATCCTCACAGACAAACCACAGATTCTTGATGTACATGAGGCTGAGGCAAATTGCCAGGTAGCAGTTAAAAGAAGATTGCCACAAGAAGTAAAACAAAAACTTGCTAAGGTCGCAAGGTTATCGGTATGTTGTAGCACACCCTATTTTACCTTGTAGTGAAGTGCCTTTGTTTACTTACGGCCCACTTAGCAATGTTTCTAAGGCTAGAGTGTAACTGTGTCCGTTCAATATTTGTTAGATTTGAAACTTGATATAGAATGCATGTGTCGAGTCATGGTAATCGCTATGTTTATTAGGAGGGATTACAGAGATGCATTCATGCATTAACTTCCTATGCTGCTGCAGTAGATTATGTGAATAGAGAAGCTTGAAGAAGTACAACCTTTTGTTTTCTGTATTCCAATGCAAATGTTTTGTTCTAACTTTTTAATACAAGTACTGGCAAGTGGCAACTTGAACTTCTTAGGCAACATATGACAGCAGAATATTGACAAATGCAGGCAAATCAAGGAAAAATACCAGAACATGAGCTGATCAATCGCCTCATGGGCATAGTTGGCCACCTTGTGCACCGTAGGACACTGAAGGTGAGTAGAGGTAGTGATTAAATTCATGTCCAGTGTGGTAGGGGCTTATTACAATTATTGGTTTGATGTATACCTTTTATGCATGCATTATGATTATTTTCTTGTCCAATTACTTCCATGCATTTCATTTTTTTTAAAAGGATAGTATCTTTTGTTGCTTTTCCAATTCTGGGTCGTCTATTATCTCTGTCTGGAAATGATCTTTATTTCTTGAACATTGAAAAAAAAAATCATAGGATGTTGTGATCTAATCATCCATTGATAAAGGTAGCCTGTAGATTCATTGAGATATTTAAACGAGTGCTAGTTAGGTAACAAGAGATAGACACTGTTTTTGTCCAGTTCTTTATGCATCGTTTTCGTAGGCCTTGGGCACCAGTACAAATATTCCACTCTTTTTATGTGGTTTCTTGAACTATTCTTATATTCTACAACTAAGTGGATTCTAGATTCCTGTTGGCATGCTGAAATCTTTTTTTTTTTTTTGGGGGGGGGGGGGTTGCATCTAAGGATTTGTTCTTGCCTTTGTTTGTGTTGACAGGCATGGGCTTTGTTACTCTTTAGTAAGCGTGGTAGAATAAATATATGTTGCATAGTGATCCTGTCAAATGAACATATATTCAAAAGACATACCAAGAGGCACCGGCAAAAAGAATCTCCTTGTGTTGTATGGTGACTTGGTGAGTTTTAAAGATTTTACTTACCAAATGTTTTTTGGCACAGAGAAACATGAAAGAAATGGTGCAATCAGGTTTATGTGCTAAACAAGAGAAGGCTGGGAAATTGCAACAAGTGAAAATGGAAATCTATGAAATGGTCAAAGCACGTCTAGCCACCAAACCTAAGGTGAAATAATTACCTTGTCAGTAAAGTGGTGTAATCTGCTTTATTTTCAGACACATTGCGTTTTGTTCCAGTCTTCATTCTTATGAAAAGCTTTGGTAGTAGGAACTCTTATATCTGTATGCTTTCAGGGTGCTGAACATAAGGTTGAATCTATAGATGGCTTTCAGGATCCTGTTACTCATGATGACAGAATGGCCTTGAGAGGAAAATCTGTCATGGATGCTGTATTGGAGGACAGGATCTGCGACCTGTATGATCTGTATGTTGAGGTATAGTCGTATTATCATGTTTACTTCAATGATAATTGCAATGCATAGCCAATTGCCCAATTGCTGTGCTGAAAGAACGACATCAGCAATAGAGACATTTTCTCTATTTTTTTTTTACCTTTTGTCTATTTTTAAGTGTATGTTGGTGAAAGGATATTTTTTTATTTCCCCCTTCAATAAGGAGGCCGCTAGAGTTGGTTTAGAACAGGAGTGTCTTGGATAAAGTCTTATCGTTTTGCTTTTTTACTTATTTTATATGTAGTATCGCTTGGAAGTTCAAAACCATGTATTTTTACAAATTGTGATTATGCTTACTAGCATGAGTAATGCATGCTTTTCAGGGTATGGATGAAGATAAGGGCCCTCAGAGTCGTAAGTTGTATCTAGAGGTACCATCCTGCCTCTTTTACCACACCTTTTTATTTCTGTGATTGCTAAAAAACTCCTCTACATTTATATGTGCCTTTAGTCTGATTGAGTGTTTCAACTTGAATCAATGGATTAGAAAATTCCAGCCTTCCCTTTCTGATTCACTATGCAGTCACACTCCTTAGACAGACTGTTGATCATGAACTTTATTTTCCTTAACTCACTTTTATATTTGTAAATTTGTAATGCCGACTTGCTTATGTATGTTGGGATAAGGGGCTAATTTTTGACCAGCAAACGAATTGCACTGGTATATTGTGTCAAGGATAGCACTTTTTTACTTAGTTTAAAGTGCCTGTAAGCAAAGCAACATAATTTGAGTTTGTATGATCCCTTAGCTTGTTTATATATCCAACTATCCAAGTTTGCTAAACAGCCTTAAGTTCCTTAAATATTTATTTAGCTATTCATAATTATCAAAGTAAATGTATACCCTGTTAATTTCTATAATGGATTTGTTTTCTTTCAGAAACTTTAAATTTTATCACCCGAGCATATGAATTTGGTATTTTGGTTGTGATCGTTCTCTTTGTGTACCGTACTGTGCTTTCAGTAAAAGCTGGGTGAAAGCCTTTCCTCTAAAATTTTTTTGGGTATTTTGGTGATGTTCTGTTTCAAAGTGCATTTTTTGTACAACTTCTCCAGTTTTCCTAGCGAATGTGATTATACTTGTCCATAACGCTCATACAAATTACAATATCTTTGTTTCTGCACCAGCTTGCTAACTTATGGCCACATGGCGACATGGATAAAGTTGGAATTCGAGATGCCATTTCTAGATCTAAGGAGCGAAGGAATTTATTATATAGGCAGAGGAAGGTGAAAGATCTTCTCTTAAGGCGTGAATGCCATTTTAGCTTAACCATGTCTTTATTTTTAACCGTCATAATCATATGGAGTGAAGGAAAACAAGTGTACAATTCAGTAATGTAAATTTCCAAATTATCCTATTTTATAGTACCTCATTTAAACCAATCATGCCATTCAGGTCCGCAATGACCAGAGGATGAAGAGAAGGCTGGCTGCTGCTGCCAAGTTGCGTGACAGCGACCCTGCCGCCCCACAATCTGCACAGTCCCTGCAAAATATGACAAGCACCCATACCATGTATCCTGTGGTTAACAATGGAAATAGTCAGAGTAGCAGAAGTGTCGACAAAGTTAATGAAATGAGCGTCGGTGCAGGATCGGATGGCAACAGGAGTTCTACCAGCATGAAGAAACGAAAAATAGACTCCGAAGATAGGCAAGTTAACCCACCGAAGGCTACTGCTGAACTTCATCATCATGGTATTGAAATACAGAAGCCGGCAAAGCGTGCAGATGAGGCAACAAAGGTCAGTAACCTTCCCCAGACGCTGCTTGCCATTCCAAGCAGCGACAGTCGCCCCAGCAGCAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018030