BGIOSGA018032

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Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018032| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018032, complete gene.| tag = OsI_200...")
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Gene Name

BGIOSGA018032

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018032, complete gene.

LocusTag

OsI_20014

Ensembl Transcript ID

BGIOSGA018032-TA

Ensembl Protein ID

BGIOSGA018032-PA

Length

6622

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21904971..21911592

Sequence Coding Region

21911284..21911592,21911008..21911192,21910220..21910544,21904971..21905288

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21904971..21911592 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21904971..21911592 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTACATCTCGAACGCGCAGGATGCCAGCAAGCTGATCGTGACGGCGAAGGGAGGAGGAGGAGAAGCCGACGACGCCGCCGCCGCCGCCGCTGCCGTCGTCCTTGACCTCTGGCGGCAGCCGGCCAAGATCCCGGCGCCGTTCGTCTGGCCGCGCGCCGACGTCGCGCTGCCGCCGTCGTCGCCGCCGACGGGGGAGCTGGACGTGCCCGTGGTCGACCTCGCCGCGGCGCTGCGCGACGCCGCCGGGATGCGCCGCGCCGTCGCGCAGGTGGCCGCCGCGTGCGCGAGCCACGGGTTCTTCCAGCGCGCCCGCCGCGCCCCAGGCACGGTCACCGGCTACACCGCCGCCCACGCCGACCGCTTCGTCGACAACCTCCCCTGGAAGGAGACGCTCTCCTTCGGCCACCGCCACGCCAACGCCGCCGGCAACAACTCCTCCACCGTCGCCGATTACTTCTCCACCCTAGGCGACGACTTCAAACACCTAGGGGAGGTGTACCAGGAGTACTGCGAGGCGATGGAGGAGGTGACGAAGGCGATAATGGCGGTGCTAGGGGAGAGCCTGGGGGTGGGGGGCGGATACTACAGGGAGTTCTTCGAGGACAGCAGCTCGATCATGCGGTGCAACTACTACCCGCCGTGCCCGGAGCCGGAGAGGACGCTGGGGACGGGGCCGCACTGCGACCCATCGGCGCTCACCGTGCTCCTCCAGGACGGCGACGTCGACGGCCTCCAGGTGCTCGTCGCCGGCGCGTGGCGCCCCGTGCGGCCGCTGCCCGGCGCGTTCGTCGTCAACATCGGCGACACCTTCATGGCGCTGACGAACGGCCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGCACCGGGAGCAGGAGCGGCGGTCGCTGGCCTTCTTCCTCTGCCCGCGCGAGGACCGCGTGGTGCGGCCGCCCGCCGGCGCCGGCGCCGGCGAGCGGCGGCTCTACCCGGACTTCACCTGGGCCGACTTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTCGACGCCTTCGCCCGCTGGCTCCGCCCACCGGCCTGCTCCGGCGCCGCGCCGGTCGTCGGCCCACCGACGACGGCGACCCAGGCGGCCACCGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MVYISNAQDASKLIVTAKGGGGEADDAAAAAAAVVLDLWRQPAKIPAPFVWPRADVALPPSSPPTGELDVPVVDLAAALRDAAGMRRAVAQVAAACASHGFFQRARRAPGTVTGYTAAHADRFVDNLPWKETLSFGHRHANAAGNNSSTVADYFSTLGDDFKHLGEVYQEYCEAMEEVTKAIMAVLGESLGVGGGYYREFFEDSSSIMRCNYYPPCPEPERTLGTGPHCDPSALTVLLQDGDVDGLQVLVAGAWRPVRPLPGAFVVNIGDTFMALTNGRYKSCLHRAVVHREQERRSLAFFLCPREDRVVRPPAGAGAGERRLYPDFTWADFMRFTQRHYRADTRTLDAFARWLRPPACSGAAPVVGPPTTATQAATV</aaseq>

Gene Sequence

<dnaseqindica>1..309#401..585#1049..1373#6305..6622#ATGGTGTACATCTCGAACGCGCAGGATGCCAGCAAGCTGATCGTGACGGCGAAGGGAGGAGGAGGAGAAGCCGACGACGCCGCCGCCGCCGCCGCTGCCGTCGTCCTTGACCTCTGGCGGCAGCCGGCCAAGATCCCGGCGCCGTTCGTCTGGCCGCGCGCCGACGTCGCGCTGCCGCCGTCGTCGCCGCCGACGGGGGAGCTGGACGTGCCCGTGGTCGACCTCGCCGCGGCGCTGCGCGACGCCGCCGGGATGCGCCGCGCCGTCGCGCAGGTGGCCGCCGCGTGCGCGAGCCACGGGTTCTTCCAGGTGAGCGGGCACGGCGTGCCCCCGTCGCTGGCGCGCGCCGCGCTCGACGGCGCCGCGGGCTTCTTCCGCCTTCCCGCCCGCCGCGAAGCAGCGCGCCCGCCGCGCCCCAGGCACGGTCACCGGCTACACCGCCGCCCACGCCGACCGCTTCGTCGACAACCTCCCCTGGAAGGAGACGCTCTCCTTCGGCCACCGCCACGCCAACGCCGCCGGCAACAACTCCTCCACCGTCGCCGATTACTTCTCCACCCTAGGCGACGACTTCAAACACCTAGGGTAAATTCACAGAAATCACTAGTTAGAAGAATATTTTTTCATGACGACACCTTTTTATTTTAAGCTAGATGTGCACTCCGCCTACGAAAATGTAACGAGAAACGGCCCTTACAACCCAAAAGTATTGACAAATGTCGCTTTCACTAGCAACTATCATAAAGCAGCCGCCAGTCTGGCGGCTGCGTTATGACAGTCGTCAGCGAAAAGGCATCTTCGCTCGCCAGCGAAAAGGGTGTATTTTCACTGGTCTGTAACAGAGTGGTTGGCTGTCCGTGAAAACCTAACGGAGTGGTTGGCCGTCCGTAAAAACCTATTTTAACAGTTTTTTTTAAGTAGTGCATGCACACATGACACCACCTAGCTACATTTGTATGAGAGATCGATCGATCGATGACATGGAGTATTTTTTTTAGATAATGGATTATATTAAACCGGGCGATGACATGGAGCATAAATGATGCAGGGAGGTGTACCAGGAGTACTGCGAGGCGATGGAGGAGGTGACGAAGGCGATAATGGCGGTGCTAGGGGAGAGCCTGGGGGTGGGGGGCGGATACTACAGGGAGTTCTTCGAGGACAGCAGCTCGATCATGCGGTGCAACTACTACCCGCCGTGCCCGGAGCCGGAGAGGACGCTGGGGACGGGGCCGCACTGCGACCCATCGGCGCTCACCGTGCTCCTCCAGGACGGCGACGTCGACGGCCTCCAGGTGCTCGTCGCCGGCGCGTGGCGCCCCGTGCGGCCGCTGCCCGGCGCGTTCGTCGTCAACATCGGCGACACCTTCATGGTATGTACTCTAGTACTCGGCCGGGATATGGATCTCGGATCGATCGATCGCCGTGTCGTGTCGTCGTGTCCGGCCATGATGGTGTCTCATCGCGACCTCGACGTCGACCTCGACGTACGTCGTCGTCTAGCTCCATTGGCTCCACCCGTTTTGCTCGCGTCCGCCGTACGGCAAAGGACGAGTAGCTATAGCTTAGCATCCTGACCACACGTACCAAATGCTGAGATCTCACCTCGATCTCGCTATAATCCGTTCTGTTAGTAAATTGGCATGTCTTTAATTTGGAAGTTAATCATCATATGGAATATTTGCGGTAAAAAACCGTCCAAGTATGAAAAGCACCAAGATTAATTAATCCGTTGTCCGACCGCCAAGTAAACACCGCAAAAAATATCATGAGATTCTTGTAGTGATGGTTTCGTAGAAAGAAATAAGGCATCTTATATTCATTTTTTGGGGTTTATAAAAGGAAGACGTACACACACATCATTATCAAATATCACATGCACAAACTAACAGTACCCAACAGCAGACAGATGTCCCTACTACTAGCATGCATGTCACTTACTACAAGTTCAGATCATCTTGAAAAAAAAATTATATGGTTAGAAAAAAAAAAGCATCACACACTCATTTGGCTACACGCGCGTAGTGCATTTTTTTTGGAGTAAAGCAACCAATATATTTCAGCAAACTTAGATTCGGCAAGGCGATCACACATAGCATATCATACAGTAATATAATCACAACCATCCGAAAGGTCCTAGAAATGTAATCATAGTCATAATCATAATTATAATTAAAATCATATAGTCATGTAGTGATATTAGAGATTTATCATTGACCACCGTCTCTAAGCAGTGTTAAGAGCCTCTCATTCACAAGTGTGTACGAGTGCGGTGTGCGTGCATGGTGGTGTGGTTGTGTCTTTTATGTGATCGTAAAAAAATTAAAAAGTCCTAAAAATATAATTTAGTCAGTGTAGCGGCTCCGCTCTAATGTCGGTTCGGTGTGGTTGTTGCCCAATCTATCGTCCCCTGCGATATATTTTTATCTATGTTAATCTATAAGATTGATCCATATATAGTTATTAGTAACAATAAATAATATTTCTAGGTAAAATCACATTGTCTATTTATTTTAGCCATTAATTAGATACTTGCTATAAATTACTGATAGGCTATTTTGGACGTGACGTTCGCATTTTGCTACCATAACAAAACATGGCGTCTACCCCTAGTATAAGCTAACAGTTTTGGTATTTTATCACTCACTTAAAAGTATCGGTGACCTAATAAGGTTGCATAATACATATAGTTATAGTATAACTGGCAGGCATATTGTAATAGTGTTTTGTACGTTGATCACCTAGGGTTTACGTTTCGATATATCTTTTTGCATGGTTGTGTAGATTAGTTTGTACATAGATATTTTCCAAAATTATAATTATGTTTAAGTTAGACTACTCTATATTTAATTATGTCGGTTCTTTAATACTGATCCATAGAGAATAATAGAGAAATGCTACAGGATGGTATCTTGTTCGAACAGAATGATATCTCAGAGGTATTGCTTAATACCTAGGTACCAGTCGATACCTATCAGGTATCAGTTGATACCTTAGACGTATCATTTCGACTGAACAGGGTACCAGCGGATACCTACCAGGTATCAGGTGATACCTCAGAGGTATTATCTTGTCCGAACGGGATATCGTCCTATAGCATTCTCAAAATAATTAACAATAGAATAAATCATCCAACGACCAGATAGTACACTGCTACAGTAGTAAACCTATTCCTTCCAAAACCACTTTGAAGGGGCATACAACTTACCGGGAATGGTTTATTGAAAACAACCGCGCGTCTTCAATACTGTTGACAGTTACCGTTGCCATATACTGTACTCCGTACCAACCTTTGTCCGATCCGGCAAGGAATATGTGTTTGTAGCTGTTTTTTTCTCTCCAAACAATCTCTAACAGTACTGTTTTTGTCAGTCTTTTTTGTCAAATATTCTCAAATAATATATCAACATTCCTACCGTGAACATTTGCTCCTCTCGTATTATTACGAGAGTAGGACATGTAGTTCATTACGCGAGATAAACTATCGTACAATATAAACCTAATATTCAAATAGTTTAAAACAAATCTAGGTAATGTTGATATATAAAGATTTTACTAATCATACTTTTAAAAGTGTGGATCTCCATCCCAAAATAACTTCATTTTTCATCTATCCATCCCAGACGTACTAATATAAAAGCAGAAAGAATAGAATGCTCTACACTTTATCAAATCCCAAAGTAATATCTGGTTCCAATATTGTGTCAGCCATTTTCATAAATTCTAATCCAATGATTATTTAAAAGCTAAAATTATTTTGCAATACATAAGATAGTGAAAAGTAGAGTTATTTTAGGACGGAGTCGGTAAAAGGACCGGCAATCTTAAGATTTTCAGCTACTCCTATACAACAGTGGCTCTGTCCTGTCTGAGGCTTGAACTTGTTAGGCCAACATCAACCCTTCGTGTTATCTAGTGTCCATATCATTAAATATATTGCCACATAAGTAAAAATCTGATGTAGCAAAAGAGTTAACGAGAAGAGAGGTAAAAAGATGAAGAAATCATTTCTCATACAAGAAACCATCTCTACAAAAGAACCAAGAACAAAAGTGAGATGATAGGTCGATAAAAGGAGAGAGAAAAGAGATAATTGGATTAGAATTTAATTTGAAGACGACATCTATTGGATATATACTTTCTATACATATTGTTTATATGGCATAGTAAGTATAGAACCGGAGAGTTTCTGGCTTAGGATGGCCTTAAAGGGCGTGCTTATTGGGAATTTAACGCACCCTTTTGCATAGCCTAACAGTGGCTCTGTGTCCTGTCCATTGGCCTCATCAGTAAACCCTTCGTCTGCTACGAGATAGTAGTATCCACCTATCCATCATCTGTCCTGGCCTGCCTGACGGCAGAGAGGCAGGCATGGTACGTAGTGCGAGGCCTCTCTCGTCCGTCGTCTCTTTTGCACTGAGAGAAATTAAAGCTACAGAGGGCTGTTTCTCTTTTCCGCCGGTTTGGACGCTTGTCTATTTTGGCCGGAGCCGGAGACGAACCGGGCAGGCAGGCGGTGGTGGCCGGTGGGCCCCGGCCGCGCGTAACGCCGGTGGTACTATCTTTGTTTTAAATTGTTCTAAAGTGTAAAGCTACCTAGCATATGATGTGATGAATATATGATGTGATGTGATATTATCTAGTACTATAAAACTGAATATAGATAATATCATATCCTGCTATACTATCTCCATTCTAAATTAGTAGTCGCTTTAACTTTTTTTCTTGGAACGTTTGACAATTCGTCTTAATTAAAAAAATAGTGCAAATAAAAAAAATGATAAGTCATACTTAAAGTGCTTTTGATAATTAAGCAAGTCACAAACAAAATAAATAATAATTCTATAATTTTTAAAATAAGATGAATGATCAAAAGTTATAAATAAAAACTCAAAACGATAAGTATTTTGGGAACCTTGTACAGGATATGACACATCATAATACAACGAATCTGGACACATTATAGTATAATAAATCTAGATATGATGTGTCACATCTAATATAAATTGCTATATTTTGAGACTGAGGGTGAAGTATTTTTGAAACGGAGGAAGTGGGACGCACTAGGGGGTACGTACGCGCACGACGCCGTCGTTTTCCCCGTTTCGGCGCCAGGCTTTGCGGCAGAACGGGGCGGGGAGGACCGGAGGAGTCGCCCTCCGACTCGACTTCGCACGTCCGCGTGCTGCGCCCCGTACACACACACCACATAGTACTGTACTGTGTGTGTCCCAAGAGTCCATCCGTCCATATCTCGCAATTGATCGCATATATCACAGATGTCTGGATCCGGTCAAGTCAAGACAAACAGCAATATGGTGGTAGTAGGGTAAATTTTGTAAAACTACAGGAATTTTAATTAAGGCTATGTTTAGATCAGGTGAAAAGTTATCACATGTCACATCAGATATACGGACAAATATTTAAAGTATTAAATGTAGATTAATAATAAAACAAATTACATATTCCGCCTGTAAACTGCGAGACGAATTTATTAAGTCTAATTAATCTGTCATTAGTAAATATTATTGTAGCACCACATTGTCAAATCATGTAGCAATTAGGCTTAAAAGATTCGTCTCGCAATTTTCAAGCAATCTGTGTAATTAGTTATTTTTTCGTTTATATTTAATACTTCATGCATCTATCTAAGCATTCGATGCCACTAAACTATCGTAAAACTTTGAGAATGCATTATAAAACTATAGATTTGATATAAAATTTATTATAAAAATACATATTTTAAGACTAAGTATGGTAAAACTACATTTATTATTTAATCGTTAAGTTATCTTAAAATGAATATTTTAGTTTAAATCTCCATCAATAATGTTACATTTGAACTATAATTATTCATCTTTTGTGATTAAATTTATGTTAAATCTACAGTTTTATGATATATTTATTATTAAATCTGCAATTTACGATACTTTATTTTAAGTATGTACTTCTATTGTAAAATAACTACAATATAAATTTATAGGTTTATAATAGTTTAGTTAATATATTCGTTGTTACGTGAAATTTACTCGATAATGTAATTTTGAGTTTAGGACAAAAGATTGGAAGATTTATAGTGTAGCATATATTACAACATTCCACAAACATACAAATGAAAAACTATTCATAATTACACAACTTAAATTTAATTAACATACTACTTTTTTTTCCCAAATCCAACTCGGACACTAGTACTGTAGTTGGCTAGTTGTATTCACTTTGCTGTGCAGCTAGCTAGTTTGTGTAATTGTGTCTAGTGAAAATTGATGCAACTGTTTAATTATTATTGATGGTGATTTTGCAGGCGCTGACGAACGGCCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGCACCGGGAGCAGGAGCGGCGGTCGCTGGCCTTCTTCCTCTGCCCGCGCGAGGACCGCGTGGTGCGGCCGCCCGCCGGCGCCGGCGCCGGCGAGCGGCGGCTCTACCCGGACTTCACCTGGGCCGACTTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTCGACGCCTTCGCCCGCTGGCTCCGCCCACCGGCCTGCTCCGGCGCCGCGCCGGTCGTCGGCCCACCGACGACGGCGACCCAGGCGGCCACCGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018032