BGIOSGA018045

From RiceWiki
Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018045| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018045, complete gene.| tag = OsI_199...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018045

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018045, complete gene.

LocusTag

OsI_19984

Ensembl Transcript ID

BGIOSGA018045-TA

Ensembl Protein ID

BGIOSGA018045-PA

Length

5124

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21639011..21644134

Sequence Coding Region

21644059..21644134,21641818..21642148,21641149..21641723,21640112..21640893,21639011..21639151

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21639011..21644134 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21639011..21644134 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTTCAGTTCCTCAGCCGATGGAATAGAATAAAATTCTCTTCTCTGAAGAACAGCGACAACAGTACTGCCGAGTCAATCCCCACCAAGCTCATCAAACAAGCTGCCATCGGAAGTGAGAACAAGTTTGACATGCTTTTGAGGATGCTCGAGGAGTGCGAGCGAAGACGGGAGGAGGCAGACCAAAGAAGGAGAGCAGATTTCCTGTCTCTCAAGGCAGCAATAGACTCGTGGATGCCCCAAGAACAAAAGAAAGCTGAAGACCTTCAGTTTTTGGTTGAGGATGAGCAGTCCAAGGTGACGCCCACCACCTGTTCGATGGAGTGCCCCAATGGCAGCAGCCCGAGCACAACAGCGAGATCCATCTACGACGACGAGGGGCTACTCCGACGATCATCCTGGAGCCTCGACGTCGAGCCTGATTTCACCGTAGCTGCGGTGGTTACATGTTCCAACACTGCCGTGGACTCCAAGGAGTTGGTAGCCACCGATGGCGCAACCGGCACCACCATCATTGACCCCCGTGTTTGTTCCAAGGAGACGCACACCAAGTGTTTGTTGTTCGGCCCCGATGTCAACGGTGTCACTGATAGAGGTGTGATTGCGTTCCAAAGTAGGATGGGCGTGTTCAAGGTCGTTCTGATATCAAGTCAGTCCATGGAGTTGATGGTTGACGAGAAAGCAACCTGCACTGACACCACTCACCTTCCCAAGGTGATGCACCCAAGCCATTTGATGTTGGGCCCCAACGTCAACACCGGTACTGTCCAGGCTGGGGTTGAGTACTCACTATTGCTTGGCGCGCCAGAAGGAATAGCATCCTCGGGAAAGGCCACACTAGTCATGGCACAAAAGCTAAACTCCAATTTCTGCCTAAAATCGGTGGCGCTCAACAGGTGTTCGACCAAATGCTCCAAGGGCTACAAGAAGCTGTTGATGAGTCATCCCAAGAGAAACCCATGGCCACCTCCTTGCTCAGTGCAAATAAGAGACCAAACACCTTCTATTGCACTATATTGTGCACCTAAAGGAGATTTAAATCATGAAAAATCTGATCGAGCTCATAAGGACACATTGGTGGCAATATTTAACTTGGAACAGTTCCATTATGTGGGTGGTGAGGAAAAAGTTACAAAGGGAATGTTATATGGCCTAAGTACAGTAAGCTGCAACTACTTGATCATTCCTGCTGCTATAATGACAACAACATTTCTGTCAGTTCCATCTTCTACTCAAAATATATATGGAGCTTGTTGGTTGGAGGCTCAAGAAGGGTTAAATGATATAGCTAAGGGAAGAACTTACAAAATTTGTAAGTCCATGCGCATGACACTTAATCATGTTGAGAGCTGGCTACAGAACCCAACAAACATATTATACAATGGTCAGTTGTTTAACTGTCCAGCGGAGATACATTTTGGGGTCAGAAGAATTTCTGGGATTATTGCTAGAGGTGCTGGTGAGAATCAGAACAGGAAGGTCAAGACATGTGGTTATGATTCCATTTTTGATTTCTGTGAGAACAATCCTAGTGATGGTAGTGCTGCAGCAAGGTTTTCCATTGATACCGGGACAGATTCAGAGATGATATATGCATCAATTGCAAACAGGGATTATTGGTCTGTTAAATTATTGGAGGTCATAAAAGAGGAATGCCCAATACGCCACTTGTTACTAGGTGATATCAAGAAAGAACAATTGCTGCAATGTGAGACATTCAATACAACACAGATAAATACAGAGCAAGTTATCAAGCTACAGATTAATTTGAATGATGTCGGTATATTGAAACTGAGCGAAAGTAAAATCAGCATCGAAAAAACAACTCCGGGGATAAAAGTTGCAAAGATGGCTAATTGGGAACAAATAACCCATTTCCACTATAAGATTTCGGATACCTAA</cdnaseq>

Protein Sequence

<aaseq>MDVQFLSRWNRIKFSSLKNSDNSTAESIPTKLIKQAAIGSENKFDMLLRMLEECERRREEADQRRRADFLSLKAAIDSWMPQEQKKAEDLQFLVEDEQSKVTPTTCSMECPNGSSPSTTARSIYDDEGLLRRSSWSLDVEPDFTVAAVVTCSNTAVDSKELVATDGATGTTIIDPRVCSKETHTKCLLFGPDVNGVTDRGVIAFQSRMGVFKVVLISSQSMELMVDEKATCTDTTHLPKVMHPSHLMLGPNVNTGTVQAGVEYSLLLGAPEGIASSGKATLVMAQKLNSNFCLKSVALNRCSTKCSKGYKKLLMSHPKRNPWPPPCSVQIRDQTPSIALYCAPKGDLNHEKSDRAHKDTLVAIFNLEQFHYVGGEEKVTKGMLYGLSTVSCNYLIIPAAIMTTTFLSVPSSTQNIYGACWLEAQEGLNDIAKGRTYKICKSMRMTLNHVESWLQNPTNILYNGQLFNCPAEIHFGVRRISGIIARGAGENQNRKVKTCGYDSIFDFCENNPSDGSAAARFSIDTGTDSEMIYASIANRDYWSVKLLEVIKEECPIRHLLLGDIKKEQLLQCETFNTTQINTEQVIKLQINLNDVGILKLSESKISIEKTTPGIKVAKMANWEQITHFHYKISDT</aaseq>

Gene Sequence

<dnaseqindica>1..76#1987..2317#2412..2986#3242..4023#4984..5124#ATGGATGTTCAGTTCCTCAGCCGATGGAATAGAATAAAATTCTCTTCTCTGAAGAACAGCGACAACAGTACTGCCGGTACAGCATTTGGCATGACAGCTTCAAGGCTTGCTATATTTTTCTAACATCCTTTTTCTTCTTTCAGGACTTAATTTGTTTCTTTTCTTTTGTTATCTTTGATATGTGTGGTAGCTTCAGTGCCTGGTTCAGTTTATGACTATGCTTCTGATTATAATTCATTATGCTTCGATAATTGGTAGCTGCTTTTCTATACTCTAAAAGTTTGGTGATGGAAATGACACTGCTACCTCACCATTGTTTATAGTTTTTACAAATTGATCCTTGATATTTTCTGATATTATAGAATAGTCTAAATATTTGGTTAAAACAAGTGAATAAAATATATTAAAACATGCAAACAAGTGATACTAACATATTTAATATTTTTTTGTCTATTACATATTATAATTTATTTTATTATATCCATAGCAAAGCATAAGCATTTTGCTAGTTTTATTTAATTTCAAGGGTTGTCGTCACTTCCGTTGCATAATTCTGTCTTCATGATGCATAAGTATTCTCTCTGTTTCAAAAATATAAATACTGTTTTGAATATAAGTAGTACTAAAAGTTGTTTACCACTAAACTACACATATAGAGGGTGTTATCCAAGGGTATAAAGTTTTGGCGTGTCACATCGGGTATTTTATAGGGTGTCGTATGGGGTGTTCGGGTACTAATAAAAAACTAATTACATAATCGATCAGACGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATGTTTACTGTAGCGCCACATTGTCAAATCATGGAGCAATTAGGCTTAAAAGATTCGTTCCGCAAATTAGTCTCAATCTGTGCAATTAGTTATTAGCCTATATATAATACTTCATGTAGGTGTTCAAACGTTCGATTTGATAGGGTGTAAATTTTTTGTGTGGAAACTAAACGGGGCCATACTATTCCTTAGCTCCATTATAGTTATAGCCCCAATTAGTCTAGGTCTACAATTCACTCACCCTGAGGAGAAAAATACATCCTTTTACCTCTCTTCTTAGTACCTATACCAAGAACTAAAATTTGTTATATTTTGGAATGAAGCGACTAATTGATTGGCAGAACTCCCGTCTCCTGAGTCACCATTTTCAAAAGGGAAAGGAATAGTTTTTTTCCTGCTTCCATCAACATGCTTGGACAGCTTCCTGGAAGGAAGAATCGTGTAGGGCTCGGACCTGTGTCGTGTTGCTTGCCAAGTCAATTCAGATCACACCGAAAATTCTCTAGAAATCTTGTTCTTTTGCAGACAGTGAACTGAGGTAGACTGATTTCTGCACTGCACATACTCCAAATCTCCAATCTGTAGGACAGCCTGTCCCTGATGGCATCTTGACTGAGACCAGTGCAAATTAGCAGCCACAGCGCGATGATTCGATTGCTAATTTCAGCCGTATTAGCAGCATCATTATCTGGTCCTGGCACCTGGTGATTTAATTTGTTCTGCCTGGATCTTCAGCAGATGGAAAAATATAGATAAAATTGTCTCTTATCTGAAGAATAGAGACGGCCCTTGTGTCAGGGACTCGGGTGGGCTACACATGGGCCGCTGGCTGCACCACGGGTTGATCAGCCCATCGCCAAGAAGTCCAAGCAAGCCCAAGCTGAAAAATATATGAGCAGCAGCAGTTTACAGAATATCGATCGAACAGATTCATTTGGCCAAGGCGGCGAACAGCGGCGGCGGCGACCTAGAGGCTGGCTGGCCTCTTTGTCGATCTCTCCTCTATTTCCCTTCTTCTCTACTAGTCTAGAAGCTACTAGAACCTTCTAGCCCTTGTATCCTTCCATCTTCCACCTCAAAACCACTCCACTATTGTAACAGACTTGGTTGTTCCCTGTATTGGATTTGGCACTGCTATTTCTGAAATTATATTGTTGAGTGGGTCTCTAATAATTTGGTATCAGAGTCAATCCCCACCAAGCTCATCAAACAAGCTGCCATCGGAAGTGAGAACAAGTTTGACATGCTTTTGAGGATGCTCGAGGAGTGCGAGCGAAGACGGGAGGAGGCAGACCAAAGAAGGAGAGCAGATTTCCTGTCTCTCAAGGCAGCAATAGACTCGTGGATGCCCCAAGAACAAAAGAAAGCTGAAGACCTTCAGTTTTTGGTTGAGGATGAGCAGTCCAAGGTGACGCCCACCACCTGTTCGATGGAGTGCCCCAATGGCAGCAGCCCGAGCACAACAGCGAGATCCATCTACGACGACGAGGGGCTACTCCGACGATCATCCTGGAGGTTGGGGATGGTGAGGGGAAGGATCGCATGCCCTTCATCATTAGCAGGACCTTCCCTAGTTGACGCCTATCATGTGTTTGACAAAATGCTCAAGCCTCGACGTCGAGCCTGATTTCACCGTAGCTGCGGTGGTTACATGTTCCAACACTGCCGTGGACTCCAAGGAGTTGGTAGCCACCGATGGCGCAACCGGCACCACCATCATTGACCCCCGTGTTTGTTCCAAGGAGACGCACACCAAGTGTTTGTTGTTCGGCCCCGATGTCAACGGTGTCACTGATAGAGGTGTGATTGCGTTCCAAAGTAGGATGGGCGTGTTCAAGGTCGTTCTGATATCAAGTCAGTCCATGGAGTTGATGGTTGACGAGAAAGCAACCTGCACTGACACCACTCACCTTCCCAAGGTGATGCACCCAAGCCATTTGATGTTGGGCCCCAACGTCAACACCGGTACTGTCCAGGCTGGGGTTGAGTACTCACTATTGCTTGGCGCGCCAGAAGGAATAGCATCCTCGGGAAAGGCCACACTAGTCATGGCACAAAAGCTAAACTCCAATTTCTGCCTAAAATCGGTGGCGCTCAACAGGTGTTCGACCAAATGCTCCAAGGGCTACAAGAAGCTGTTGATGAGTCATCCCAAGAGAAACCCATGGCCACCTCCTTGCTCAGGTGGAGTGGTTAGAAGATGGAAGGAGTGGTATGTGCCATAGGGATAATATTTTATTTCATGCCACCATGGCCACCACCAACTCAAATTGGAACCATAATACTTTGGCTGCTGGTAAACACATGGTTGACGGAAGTAGAGCTGAAACCGTGGCCTGACCCACAACCAAGTCAATAGAGCGGAGGCGTGATGTGGACTGAGCAAGTCCCATGGCCTACACCAGTTTTTGCACATTTGATGGGATATGATTTTTGCAGTGCAAATAAGAGACCAAACACCTTCTATTGCACTATATTGTGCACCTAAAGGAGATTTAAATCATGAAAAATCTGATCGAGCTCATAAGGACACATTGGTGGCAATATTTAACTTGGAACAGTTCCATTATGTGGGTGGTGAGGAAAAAGTTACAAAGGGAATGTTATATGGCCTAAGTACAGTAAGCTGCAACTACTTGATCATTCCTGCTGCTATAATGACAACAACATTTCTGTCAGTTCCATCTTCTACTCAAAATATATATGGAGCTTGTTGGTTGGAGGCTCAAGAAGGGTTAAATGATATAGCTAAGGGAAGAACTTACAAAATTTGTAAGTCCATGCGCATGACACTTAATCATGTTGAGAGCTGGCTACAGAACCCAACAAACATATTATACAATGGTCAGTTGTTTAACTGTCCAGCGGAGATACATTTTGGGGTCAGAAGAATTTCTGGGATTATTGCTAGAGGTGCTGGTGAGAATCAGAACAGGAAGGTCAAGACATGTGGTTATGATTCCATTTTTGATTTCTGTGAGAACAATCCTAGTGATGGTAGTGCTGCAGCAAGGTTTTCCATTGATACCGGGACAGATTCAGAGATGATATATGCATCAATTGCAAACAGGGATTATTGGTCTGTTAAATTATTGGAGGTCATAAAAGAGGAATGCCCAATACGCCACTTGTTACTAGGTGATATCAAGAAAGAACAATTGCTGCAATGTGAGACATTCAATACAACACAGATAAATACAGAGCAAGTTATCAAGCTACAGGTGAGCAATTCCAAGGAAATACAAGAGCTACAGGTACCATGGGATCCAGGAGGTTTTCTTCATCGGCTTGGGGACAAGCCAAATTTCAAGAAGAGGGGATTGTCAGGGGCTCGGGTGGGCTGCACATGGGCCGCTGGCTACACCACGGGTTGGTCAGCCCATCGCCAAGAAGCCCAAGCAAGCCCAAGCTGAAAAATATATGAGCAGCAGCAGCTTACAGGAGATCGATCGAACAGATTCATTTGGCCAAGGCGGCGAACAGCGGCGGCGGCGACCTAGAGGCTGACTGGCCTCTTTGTCAATCTCTCCTCTATTTCCCTTCTTCTCTACTAGTCTAGAAGCTACTAGAACCTTCTAGCCCTTGTATCTTTCCATCTTCCACCTCAAAACCACTCCACTATTGTAACAGACTTGGTTGTTCCTTGTGTTGGATTTGGCACTGCTATTTCTGAAATTATATTGTTGAGTGGGTCTCTTAACACCTTGGCCTTTGCCAGCTTCTGAGTGGGCTGCAGTTTTTATTACATTGATCAAGACAGGAAATCTGTAATTTGAAGCTTGGTTTAGCTTCGGATTATAGCTTGACGCCTATTTTAAACGTCGGAATCTTATTTTGGGATCAAATTTAGGAGTTTTTTGTCGTTACTTTTGTGACCCATCTCTCTTCATGATCAATAAGTAGACATGTAAAATTTACCTACAATTATTCTTAAAAGATTAAGCTTCAAATTTTAAAATCGCTTTGGAATATAAATTCTGCATTTGAACCAAGCACACAGTATGCTTATGCTCACCCAGTACTTCACTCTATTGCAAGTGGTGAGTGATGTCAACCTAGCAGCTATTTCACAGATTATTTTGTGGGGAAACTTTTTTTTTTGGACATTTCAAAAGTGTTGCTATGTATGATCAAGCTCATATTTCATTTGTCATGCTGGCTGCATCTTGCTCTTTACCCAGATTAATTTGAATGATGTCGGTATATTGAAACTGAGCGAAAGTAAAATCAGCATCGAAAAAACAACTCCGGGGATAAAAGTTGCAAAGATGGCTAATTGGGAACAAATAACCCATTTCCACTATAAGATTTCGGATACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018045