BGIOSGA018048

From RiceWiki
Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018048| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018048, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018048

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018048, complete gene.

LocusTag

OSJNBA0084P24.1

Ensembl Transcript ID

BGIOSGA018048-TA

Ensembl Protein ID

BGIOSGA018048-PA

Length

1352

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21506078..21507429

Sequence Coding Region

21507261..21507429,21506840..21507153,21506078..21506524

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21506078..21507429 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21506078..21507429 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAATGCAGCTGTCCTTGCCTGTCTTGCCAACGGGTTTTCGTTTCCATCCAACCGATGAGGAACTAGTCATCAACTACCTCCAGAGGCGTGCTACCGGGCTATCGTGCCCCATCCCCATAATCGCAGATGTCGAAATATACAACTTCAACCCGTGGGAGCTTCCATCCATGGCTCTATTTGGGGAACATGAGTGGTACTTTTTTACACTACGCGACCACAGGTACCCCAATAGTGTGCGCCCTAGTCGCTCAGCGGCGTCAGGCTTTTGGAAGGCCACCGGCACTGACAAGCCCGTCCAAGTTGCTAACATACAAAGCACTCCTGTAGCTATGAAGAAGGCACTTGTATTCTATGTTGGCCGCCCGCCCATGGAAACCAAGACTACATGGATCATGCATGAGTACCGTCTCACAAACACGGGAGGGTCCACTGCCTCCCACCCATCCTTGTCTTCATCCACCGCACACCCTTCTGTGAAGCTAGACGAGTGGGTGCTATGCAAGATCTTCAACAAGTCCCCAGAGCCGGACAACACCGCACCACCATCAAACGTCGTCTCACGGTTACAGTGCTCGCCGCCGCTGCCGCCGCCGGCGGCACCGCCCGGCAACTACCCGCCGCTGCCGGTGGGTGCGACGAACGACGGCGGCGTGTTCGCCGGCGCCGGCGACATGCTCTTCACCATCCAAGAGCACCAGGAGGGAACACCATCGATGCTGCCGCCGATCCCTAACCTTGAGCCACCGGCGGCAACAATTGGGAATTCCTCTCTCAATGGCACTGCTGCTGCTGCTGCTGCTGATGGCCATGGCCGCCTTGAGGAAGAGGACACCAGCACCTACACCTTCACCGACCAGGAAATGGAGCAGATGCTCATGGACCTGATGGACCAGGATTTCTTTGGCAATGATCAACCCCAGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAMQLSLPVLPTGFRFHPTDEELVINYLQRRATGLSCPIPIIADVEIYNFNPWELPSMALFGEHEWYFFTLRDHRYPNSVRPSRSAASGFWKATGTDKPVQVANIQSTPVAMKKALVFYVGRPPMETKTTWIMHEYRLTNTGGSTASHPSLSSSTAHPSVKLDEWVLCKIFNKSPEPDNTAPPSNVVSRLQCSPPLPPPAAPPGNYPPLPVGATNDGGVFAGAGDMLFTIQEHQEGTPSMLPPIPNLEPPAATIGNSSLNGTAAAAAADGHGRLEEEDTSTYTFTDQEMEQMLMDLMDQDFFGNDQPQE</aaseq>

Gene Sequence

<dnaseqindica>1..169#277..590#906..1352#ATGGCAATGCAGCTGTCCTTGCCTGTCTTGCCAACGGGTTTTCGTTTCCATCCAACCGATGAGGAACTAGTCATCAACTACCTCCAGAGGCGTGCTACCGGGCTATCGTGCCCCATCCCCATAATCGCAGATGTCGAAATATACAACTTCAACCCGTGGGAGCTTCCATGTAAGCCATATGTGTAGTCTAGTGTGCATTAATATTTATGCTTGATTATAGAATGGATGAACTTACCAACTACTATACACAATGTGTTAATGATATTGGTGTTGCAGCCATGGCTCTATTTGGGGAACATGAGTGGTACTTTTTTACACTACGCGACCACAGGTACCCCAATAGTGTGCGCCCTAGTCGCTCAGCGGCGTCAGGCTTTTGGAAGGCCACCGGCACTGACAAGCCCGTCCAAGTTGCTAACATACAAAGCACTCCTGTAGCTATGAAGAAGGCACTTGTATTCTATGTTGGCCGCCCGCCCATGGAAACCAAGACTACATGGATCATGCATGAGTACCGTCTCACAAACACGGGAGGGTCCACTGCCTCCCACCCATCCTTGTCTTCATCCACCGCACACCCTTCTGTGAAGGTACAAACAATACAAACTATATTGAGAAATTATTTTTATTTCTTGAGAGAATGGTCCTTCGTTTTTAGTGTGTCGTCTGTTTAGTTATGAAATTCTTTGACAAGGTAATACATGACAAAATTTGACTTCTGTAACTTGTAGAAAAAACTAACTACACTCCTCCTTGCAAAAGAAAAAACAGAGTACATATTCCATTCCTAGTCGATCTCGATCGTTAGTTCATCATATATGCAAGGCTTAATATCTCCCCCTTTTTTACTGATCTTACCAATAGATTAACCATGTTATCATGGATCTATATGCGTATATATGCAGCTAGACGAGTGGGTGCTATGCAAGATCTTCAACAAGTCCCCAGAGCCGGACAACACCGCACCACCATCAAACGTCGTCTCACGGTTACAGTGCTCGCCGCCGCTGCCGCCGCCGGCGGCACCGCCCGGCAACTACCCGCCGCTGCCGGTGGGTGCGACGAACGACGGCGGCGTGTTCGCCGGCGCCGGCGACATGCTCTTCACCATCCAAGAGCACCAGGAGGGAACACCATCGATGCTGCCGCCGATCCCTAACCTTGAGCCACCGGCGGCAACAATTGGGAATTCCTCTCTCAATGGCACTGCTGCTGCTGCTGCTGCTGATGGCCATGGCCGCCTTGAGGAAGAGGACACCAGCACCTACACCTTCACCGACCAGGAAATGGAGCAGATGCTCATGGACCTGATGGACCAGGATTTCTTTGGCAATGATCAACCCCAGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018048