BGIOSGA018051

From RiceWiki
Revision as of 02:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018051| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018051, complete gene.| tag = OsI_199...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018051

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018051, complete gene.

LocusTag

OsI_19967

Ensembl Transcript ID

BGIOSGA018051-TA

Ensembl Protein ID

BGIOSGA018051-PA

Length

3391

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21472915..21476305

Sequence Coding Region

21476251..21476305,21475918..21475959,21475588..21475824,21475117..21475299,21473068..21474148
,21472915..21472981

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21472915..21476305 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21472915..21476305 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTCGGATGCGGAGGCGTTGCGAGGGGGGAAGCGCACGAGACGTTCACAGAGAGGAACTTGGAGCTTCAATGGGGGAACCTAGTGTTGCACGTTCCAAAGACTGTGATATGGAGTATGATGATAGTTCTTCTAGACAAAAGTGGCGAGCCTTTGTGGGAACATGCGGAAGGTGTGGAACGATTTGTCGATTATTCAGATGGCTTGCCCCCTACAAGCAAGGGTATGTTTCAGTCAAATAAAAGAAAGAGCAAAGCTGCAGATGAGGATCTTCATATGAAACTTCGAACTCGATTGGATGCTGAAGTTGCTAGAATGTTCTATTCTTCAGGTTTGTCCCCCACTATTACAAGGAACCCATATTATCGGGGTTCATTCGCTATGGCCGCGTTGTTCCAGATTCCTGGATATGTTCCTCCTGGGGTCGACCAGCTGAAGACAACTCTCTTGCAGAAAGAAAGGGCTGACATTGAAAACATGCTGCAGACCATAAAAAACACGTGGAGGAAAGCAGGCTTGTCCTTCAACTCTGCAAGGGACCCATACTTCCGGAGTTCATTTTCTTTTATTTTGAAGAATATTATTCCTGGTTATGTTCCTCCTGATTGCAAAAGGTTGAAGACAACTCTTCTGCAAAAAGAAAGGGCTCGCATTGAAGACTTACTAAAACCCATCAAAAGCATGTGGAGGAAGGCAGGTGTGACGATAGTTTCTGATGGTTGGTCAGATATTCGACAGCGCTCACTTGTCAACATTCTGGCTGTCAATGAATGTGGACCCATTTTTCTGCAAGCAATTAACAATGAAGATGAGGTGAATACAAAGGAGTACATTGCAGAGAAGCTCATTGCTGTTATTGAAGAGGTTGGTCCAGAAAATGTTGTCCAAGTGATCACAGATAATGATCCTGTTTGCAGAGCTGCTGGGCTGCTGATTGAAGAAAAATACGATCACATCCAATGGATGCCTTGTATTGCTCATACTTTAAGTCTTGCCTTGAAGGATGTTTTTTCTCCTAACAATACTGGAGATGTTGCCTTCAAAGATAGCCATTGGATTTCTGAAGTTGTAGAGGATGCAATTATGATCAAGAATTTCATAATAAATCATACCATGATATCATCTATACTGAGTGAGTTCAGTAAGTTGAAGATTCTTGCTATTTCGAACACAAGATTCGCTTCAGATCTTGTTATGTTAAAGAGGTTTCGGCTGATCAAGCAATCTCTAATAATGTTGGTCATCAGTGACAAGTGGTGGCCGGTTTACTGTAATGATAACATGGAGCAAGCACAGCTTGTGAAGTACAAGCTTACTGATAACTCGTGGTGGAAACAAGTTGATTACATTCTTTCTTTCACTGAGCCTATATATTCGATGATGCGCGTGACAGACACTGAAGAGCCACGCCTTCATCTTATCAATGAAATGTGGAATACTATGGTCGAGAAGGTAAAGGCTGCCATTTATAAGCATGAATCAAGAGAGCCTGAAGAGGAGTCAGCATTTTACTCTGTTGTGCATGGCATTCTAGAAGATTGGTGGAGCAGGAGCAAAACTCCGCTCCAGTGTTTGGCGCACTCACTAAATCCAAGGTATTACAGTGACAGCTGGATTAATCAAGCTGCTAATCGTCTAGAGATGCTGAGATTTCTCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAVGCGGVARGEAHETFTERNLELQWGNLVLHVPKTVIWSMMIVLLDKSGEPLWEHAEGVERFVDYSDGLPPTSKGMFQSNKRKSKAADEDLHMKLRTRLDAEVARMFYSSGLSPTITRNPYYRGSFAMAALFQIPGYVPPGVDQLKTTLLQKERADIENMLQTIKNTWRKAGLSFNSARDPYFRSSFSFILKNIIPGYVPPDCKRLKTTLLQKERARIEDLLKPIKSMWRKAGVTIVSDGWSDIRQRSLVNILAVNECGPIFLQAINNEDEVNTKEYIAEKLIAVIEEVGPENVVQVITDNDPVCRAAGLLIEEKYDHIQWMPCIAHTLSLALKDVFSPNNTGDVAFKDSHWISEVVEDAIMIKNFIINHTMISSILSEFSKLKILAISNTRFASDLVMLKRFRLIKQSLIMLVISDKWWPVYCNDNMEQAQLVKYKLTDNSWWKQVDYILSFTEPIYSMMRVTDTEEPRLHLINEMWNTMVEKVKAAIYKHESREPEEESAFYSVVHGILEDWWSRSKTPLQCLAHSLNPRYYSDSWINQAANRLEMLRFLK</aaseq>

Gene Sequence

<dnaseqindica>1..55#347..388#482..718#1007..1189#2158..3238#3325..3391#ATGGCGGTCGGATGCGGAGGCGTTGCGAGGGGGGAAGCGCACGAGACGTTCACAGGTTTCCTGGACTGGTTACCCCGTCGGCGAGGAGTGATTTCCCCCCCCCCCCCATTGAGATTAGGTTTTTTTTTTATTTTGACGCGTGCATTTTGAGGCATGGTGATTGGGGGGAAATATTGCATCCGATGCATTTTACTTGGTGGGAGTGCCAATTTTGGTGGCAAAATGAAAAATCAAGTGATCTATGGGAGGTTGTTGTTGATCTCCTATATTATTTTTAGATATTTTTTAGGCGACCTTCTGGTAGGTTTTCTTTTTCTTTTTTTAACAAAATCTTTCGTTGGTGTAGAGAGGAACTTGGAGCTTCAATGGGGGAACCTAGTGTTGCACGGTATGTACATTTTCCTGGGATTTTCTAATATCGAGCAAAAAAGGAGCATTTGCATACTCACCTTGTAAACTGTTTATGACATCTTTGTAACAGTTCCAAAGACTGTGATATGGAGTATGATGATAGTTCTTCTAGACAAAAGTGGCGAGCCTTTGTGGGAACATGCGGAAGGTGTGGAACGATTTGTCGATTATTCAGATGGCTTGCCCCCTACAAGCAAGGGTATGTTTCAGTCAAATAAAAGAAAGAGCAAAGCTGCAGATGAGGATCTTCATATGAAACTTCGAACTCGATTGGATGCTGAAGTTGCTAGAATGTTCTATTCTTCAGGTTAATACCTTAAACATGAAATCTTTGTGTTCATGTTGTATGGAATGCCATTGAACGCATGTTTCAATTTTCAAGATTATCCTTAAAGGCCGCGACGGACCCATTCTTTAAGAGCGCATTCTCTCGTGCCACCTCCATGCCTGGTTTCGCGGCTGAAGAGGATGAGCATCAAGATGACCAGCCTTCCCTAGTTACACAAATGTTCTTTTCCATAGGTTAACATCTCAAACTTGAAGGTCTTTCAGTTTGTATGTATGGATTGTCCTTTAGTATCATTCATATTTGCAGGTTTGTCCCCCACTATTACAAGGAACCCATATTATCGGGGTTCATTCGCTATGGCCGCGTTGTTCCAGATTCCTGGATATGTTCCTCCTGGGGTCGACCAGCTGAAGACAACTCTCTTGCAGAAAGAAAGGGCTGACATTGAAAACATGCTGCAGACCATAAAAAACACGTGGAGGAAAGCAGGTGTGATGATTGTTTCTGATGGGTGGTCAGATTTTAAAAGGCGACCTATCATCAATATCATAGCTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTAACTCATGAGTGAATCTGCGAGTTAAATTTTAACTCAGGGTGACGTGGACGAATCTCGAACGTTCATTTCTCGATCCAACGGTAGTTTCCAAGTTTTCACTACATATGTGGTTTGCACTAGATATTTTCCCCTTTTGTTCTGAACTAATCATGATACCTTTGGATGAACTTTGTAGATTTTTTTTACTACCGGCTTTTACTAAACTTGCACACATTAATTTTCAGTTCGAAAGCTTGAGAGATAGATGGAAGGCGAGGATGAGTCTCCTTCTCCTGGAGAGAATGAGTTGCCTTTGTGGGGGCATGTTAAGATATTGGATGGGTTCGCTCCTCGCTGTGGAACAAACATGAGGTTCCTATGCGACTATTGCAGTTGTGTCTTTCGTGGAAGCTATTCCACAGTGAAGGCACATTTGCTTAAAATTTCTAAACAAGGTGTTCCAGCTTGCCCAGGAGTGACCTTCAATGTCTTAATGAAACTATCCAGTGAAGTTGATGCAGCAGAAGATTCAATTCTAATCCAGGTGCGTAAAAAAAGGAATGTAACAGAATCTTGTAGCAGTGACTATTCTGGTGACGAACCAGAATCTTGTAGTAGTGACTATTCTGGTGACGCACCGTGTATGGGCAAAGTTATTGTACAAGCGAAAAGAAAGAAGAGCAGAGCTGAATGTCGAGATAACTTCGATGCTCAGTTTGCAAGAATGTTCTATTCTTCAGGTTACTACCTTAAACTTAAAAACTTGTATATTTTCCTTTTGGGAACATGCATAAGTTTGCACATAACAGGGTACTCTGTTTATGTTGTATCCATCGCCCTTCACTTTTTGTTTTATCTTAGCAGGCTTGTCCTTCAACTCTGCAAGGGACCCATACTTCCGGAGTTCATTTTCTTTTATTTTGAAGAATATTATTCCTGGTTATGTTCCTCCTGATTGCAAAAGGTTGAAGACAACTCTTCTGCAAAAAGAAAGGGCTCGCATTGAAGACTTACTAAAACCCATCAAAAGCATGTGGAGGAAGGCAGGTGTGACGATAGTTTCTGATGGTTGGTCAGATATTCGACAGCGCTCACTTGTCAACATTCTGGCTGTCAATGAATGTGGACCCATTTTTCTGCAAGCAATTAACAATGAAGATGAGGTGAATACAAAGGAGTACATTGCAGAGAAGCTCATTGCTGTTATTGAAGAGGTTGGTCCAGAAAATGTTGTCCAAGTGATCACAGATAATGATCCTGTTTGCAGAGCTGCTGGGCTGCTGATTGAAGAAAAATACGATCACATCCAATGGATGCCTTGTATTGCTCATACTTTAAGTCTTGCCTTGAAGGATGTTTTTTCTCCTAACAATACTGGAGATGTTGCCTTCAAAGATAGCCATTGGATTTCTGAAGTTGTAGAGGATGCAATTATGATCAAGAATTTCATAATAAATCATACCATGATATCATCTATACTGAGTGAGTTCAGTAAGTTGAAGATTCTTGCTATTTCGAACACAAGATTCGCTTCAGATCTTGTTATGTTAAAGAGGTTTCGGCTGATCAAGCAATCTCTAATAATGTTGGTCATCAGTGACAAGTGGTGGCCGGTTTACTGTAATGATAACATGGAGCAAGCACAGCTTGTGAAGTACAAGCTTACTGATAACTCGTGGTGGAAACAAGTTGATTACATTCTTTCTTTCACTGAGCCTATATATTCGATGATGCGCGTGACAGACACTGAAGAGCCACGCCTTCATCTTATCAATGAAATGTGGAATACTATGGTCGAGAAGGTAAAGGCTGCCATTTATAAGCATGAATCAAGAGAGCCTGAAGAGGAGTCAGCATTTTACTCTGTTGTGCATGGCATTCTAGAAGATTGGTGGAGCAGGAGCAAAACTCCGCTCCAGTGTTTGGCGCACTCACTAAATCCAAGGTAAATCTTGCTTTGTAGTTACCAAGTGATTTGTATTCCTGAAGCCATTATTTGATATATATGCCTCTTTGTGGTCTCTTTTGTAGGTATTACAGTGACAGCTGGATTAATCAAGCTGCTAATCGTCTAGAGATGCTGAGATTTCTCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018051