Os11g0657100

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0657100| Description = Peptide chain release factor 1 family protein| Version = NM_001074926.1 GI:115486500 GeneID:4351050| Length = 4374 b...")
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Gene Name

Os11g0657100

Description

Peptide chain release factor 1 family protein

Version

NM_001074926.1 GI:115486500 GeneID:4351050

Length

4374 bp

Definition

Oryza sativa Japonica Group Os11g0657100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28148785..28153158

Sequence Coding Region

28148822..28148971,28149105..28149161,28149447..28149527,28149645..28149702,28149813..28149916
,28149989..28150040,28150157..28150206,28151059..28151124,28151204..28151368
,28151456..28151528,28151639..28151771,28152071..28152128,28152336..28152383
,28152518..28152601,28152728..28152799

Expression

GEO Profiles:Os11g0657100

Genome Context

<gbrowseImage1> name=NC_008404:28148785..28153158 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28148785..28153158 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccttcctcgccggcttccgggcgccgcggccgcgggtcccggccgtctccgccgccgcccggagcctccctcccaacacctccttcttctccggcggaaggcggcgcaggaggcttctttcctcatcggtggtctgcatggcggagccctatctcatagcaaagttggattctgcagagaaggcttggaaggaaatgtcggttagattggctgatcctgatatagtttcggatcccagcgagtaccaaaaacttgcacaatcagttgctgaactagatcaggttgtgagtacgtacaggcagtttaaggactgtgagaagcaaattgaagaaacaaaagttttgcaaaaagagaatgaagatgacccagatatggcagagatgattgattcagagatggagtctctatctaaccagcttgaagagcttgaggaaaaactgaagttactactgcttcccaatgatcctcttgatgcacgcaacatcttacttgaagtaagagcaggtgctggtggtgatgaagctggaatttgggctggtgaccttgtgcgtatgtatcaaaaatactgtgagcgcaactcctggaagttcaaaccagtttccagctcagaagcagaaaagggtgggttcaagacatatgtgatggaggtgaagggcaaacaagtctacagtaaactgaagtttgagtcaggtgtacaccgtgttcagcgcgttcctcagacagagactatgggccgtgttcacacatcaacagcaactgtagctattatgccagaggctgatgaagttgatgtggttatcgatccgaaagatattgaactcaaaactgcaagatctggtggagctggagggcagaatgttaacaaggtggaaactgctgttgatcttattcacaaacctacgggaattcggatattctgtacagaagaaaggtcacaactccaaaatagagaacgcgcattccaattgttgagagcaaagctttacgagataaaattacgggagcagcaggaatctataagaaaccagaggaaactgcaggttggaactggtgctcgttctgagaagataaggacgtacaattataaggacaacagagtgacagatcaccggttgaagatgaactttgaactcactggtttcctcatgggagatatcgagtcggctgtgcagtcctgttcttcaatggagcagaaggaactcctggaggagatggccacatctgtgggcgcagcgaaggtatga</cdnaseq>

Protein Sequence

<aaseq>MEAFLAGFRAPRPRVPAVSAAARSLPPNTSFFSGGRRRRRLLSS SVVCMAEPYLIAKLDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYR QFKDCEKQIEETKVLQKENEDDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLD ARNILLEVRAGAGGDEAGIWAGDLVRMYQKYCERNSWKFKPVSSSEAEKGGFKTYVME VKGKQVYSKLKFESGVHRVQRVPQTETMGRVHTSTATVAIMPEADEVDVVIDPKDIEL KTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIK LREQQESIRNQRKLQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELTGFLMGDIESAV QSCSSMEQKELLEEMATSVGAAKV</aaseq>

Gene Sequence

<dnaseqindica>38..187#321..377#663..743#861..918#1029..1132#1205..1256#1373..1422#2275..2340#2420..2584#2672..2744#2855..2987#3287..3344#3552..3599#3734..3817#3944..4015#gctactgctcctcttctcatcgccacgctacctctcaatggaggccttcctcgccggcttccgggcgccgcggccgcgggtcccggccgtctccgccgccgcccggagcctccctcccaacacctccttcttctccggcggaaggcggcgcaggaggcttctttcctcatcggtggtctgcatggcggtaagcacagccaatcttgttggttttacccgttaaaaatttgcaccgttcttacctgaaatggaggattgattgtgtgatggaagagaacttatgagtgttcttctaatcttttttgctttgtcactggtaggagccctatctcatagcaaagttggattctgcagagaaggcttggaaggaaatgtcggtatggctttctgttcaattcccagctttctttctttttttttttgaataataataatttttttggataagatcataagaaatgacccaatgtatttgtctgctcctttttttgaagttattaaatggtggagaattacttttagaattaagttcggtccccccttgaaactactatactgatgatgtcatgcttgcatagtgatatggaaatttttccatttttattcactttctttattgatttactgaacatgttcatttgataagtgattatccacttcaggttagattggctgatcctgatatagtttcggatcccagcgagtaccaaaaacttgcacaatcagttgctgaactagatcaggtatctgacataattccagcagcatttgctcttggttacttgtagtaacttgtaggatgcctcatgcctgcttctttttccccatttgtttcatcacttttttgtgaaattattcaggttgtgagtacgtacaggcagtttaaggactgtgagaagcaaattgaagaaacaaaaggttagcatgctatagtgcttcttctttttagaactatgcatagtgtttcttatgccaccctgggattaagtgctagattctcacaaactgtgtatgtgctgatatgatagttttgcaaaaagagaatgaagatgacccagatatggcagagatgattgattcagagatggagtctctatctaaccagcttgaagagcttgaggaaaaactgaaggtgtgtgtgaaatagatattgcgtgttagacatgttgagatgattctcattgctcttgttgtttcatgttagttactactgcttcccaatgatcctcttgatgcacgcaacatcttacttgaaggtacatctcaattttgccctgtcttttggccatatttatttgagaaataacagtggtgtttctttacaatttcaaacccgtgttttggaactgagactatgtttttgccatttcagtaagagcaggtgctggtggtgatgaagctggaatttgggctggtgaccttgtaggtagataagactgtacaaattgagtatgatttagcaactgagaaaggatagctgttttggtttagtctaagcaatagaatattaagtcttgctgaaaagaatttgatttatgggatttgtgttaaatagcctagcagttaatatgtcaactaatgagcaagataaggttttcttttcgcaatataatcatgagaaaattccctatctagcataaaaaaaagttgctcttccctctatagcacccaaacttcaaaagttccctatctagtcacttctaaaattttccttccctatgtagcacttccgttagtttttacacttgacggtgttaaccagcgggagaaaagacggttttgcccttctttagttttcagacttgcccgtacatgatcgttggtattttagacgtgctttctcttgatttaacgtagcactgcaaatataacatgtcaatccactcttttgaaaaataataataattatcctcctgtggtttcacttgccattaattaacttaagtaattaataacgaacatcatgtacaggcaagtctgaaaactaaagaagggcaaaaccgtcttttctcccgctagttaacatcgtcaagtgtaaaaactaacataagtgctacatagggaagggaaattttagaagtgcctggatagggaactttttaagtttaggtgctatagagggaagagcaactttttttgatgctagatagggaattttctcatcatttgtgttcattatactttagaagctatattttcgatacctgcatgcatcatgtgtacagttttattcacataatttggcagctaagcatgtcaatgactattttataggtgcgtatgtatcaaaaatactgtgagcgcaactcctggaagttcaaaccagtttccagctcagaagtatgcttttgcatcctggaccttaaccttaacctgaggcttaaataacaacatgctgctcactagtcgaatcttttaggcagaaaagggtgggttcaagacatatgtgatggaggtgaagggcaaacaagtctacagtaaactgaagtttgagtcaggtgtacaccgtgttcagcgcgttcctcagacagagactatgggccgtgttcacacatcaacagcaactgtagctattatgccagaggtgagctattagatgtcagttttttttttttgtcaatatcttttctttctttggaagctttttgatattgttttgatggcatcacaggctgatgaagttgatgtggttatcgatccgaaagatattgaactcaaaactgcaagatctggtggagctggaggtaatatcacttactattgttctaacaagagtactgtattctttttctctgaatgtcttgtaacagccgagtctaacctcaaatgtcctccaaaatatcacttgttgcagggcagaatgttaacaaggtggaaactgctgttgatcttattcacaaacctacgggaattcggatattctgtacagaagaaaggtcacaactccaaaatagagaacgcgcattccaattgttgagagcaaagctgtaagtttctattttttagtttctattgttattttgtagccttcaaaactttgtttttctattttccataatctatatgcagcctgtcatttcagtattctgcccataaacatgttctttataagcccatcgttgcgttgttggttctagctatctggaaagaaatgctaaatacagtaaacttatatttggtctccaggcttgttggtatttagatgatagattgtagtttaatagcagcaggtatccttgtgaacccttattttatgtctgatatatctctcgcataaacattacagttacgagataaaattacgggagcagcaggaatctataagaaaccagaggaaactgcaggtaaattatcagttttacctaggatcagcgtacaaaggtttaaactgttacattcgattgaaagtacaccaaaaatatgtatttagttgtagatgataaaccttttagattcaatgtaaatggcatttctcctttacatggcaatgaagcatatactatactatttttcctctgttggtttttactaatatttggtggctattgaaggttggaactggtgctcgttctgagaagataaggacgtacaattataaggtaccagcagagcttttcatctgatggtctgctgtcataagaattcatggcattggcattggcatttgtgtagtcagtgttttggcatatttttggctaatctggagtatgaaatatttcacattttcctacaggacaacagagtgacagatcaccggttgaagatgaactttgaactcactggtttcctcatgggagatatcgagtcggctgtgcaggtaaactacatatacaaagatgcaaatcgtgcaacatgtaactactataataaaagaaaagatgaagttcatggcacagaaattccacctctcatgttagttcttttgttgctgaaacatttgcagtcctgttcttcaatggagcagaaggaactcctggaggagatggccacatctgtgggcgcagcgaaggtatgatcagcgcgatcgatctgtctgcagtcctccttccacctgagtaccagaccatcagatagaaatcatccaatggacattgtgttgaaacgggtggtgatcaatggacaaatgtacatgaagaaatccgaagatacatatacatatgcttccgttgctcatgagcatgactaatgtcagaaaacacactgatgcattttcagttcctcttacagttacaaattttgagtagttggatatatgcaatgtgtacatctcaacagttgcatagctacaatatgcattatgcacaattcaacctgttaatagatgggaatgaattatggtgatttgtcaatgtgttcaattgaaatgaatgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0657100, RefSeq:Os11g0657100