BGIOSGA018105

From RiceWiki
Revision as of 02:30, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018105| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018105, complete gene.| tag = OsI_198...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018105

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018105, complete gene.

LocusTag

OsI_19863

Ensembl Transcript ID

BGIOSGA018105-TA

Ensembl Protein ID

BGIOSGA018105-PA

Length

8215

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20449661..20457875

Sequence Coding Region

20457860..20457875,20456488..20456643,20456139..20456347,20454803..20454854,20452555..20453125
,20451365..20451440,20449661..20449738

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20449661..20457875 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20449661..20457875 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACATCAAATGTGACGCCCAAGACGGCGGCGCGAGATGCTGTGGAGGAGCTTCACGAGAACCCTTGGAGCTACGACATGGTCCTCACCGAGGTGCACGCGCCGGCTGGGATAGACGGCTTCAACCTCCTCCAGTACGCCGGCACCGACATGGATCTACCAGTCGTCGTGTTCTCTGCGGACGACGACAAGAGGACGGTGTTGAAGTGTGTCAACAGCGGCGCGTGCGACTACCTGGTGAAGCCCCTGCGGCACGAGGAACTGAAGAACATATGGCAGCATGTGTACAGGAGGAAGCTGCGCAGCGGTGGTCGTCGCGCTGCAGCTGCAGGAAACAGCAGCAAGGGGGAGATCAAGAAGAGGTTTAGGTGGCCTAAGATTTTCAATATATGTAAAAACTTGGTTTGCCATGCTTTAACTAAGCTGCTAGTGTTCTCCGAGGGCGAAGATGTGGTGATGGTGATGAGGACGGTGATGAACGGCGCATGCGACTACATGGTGAAGCCGATGACATCAGAGGCGATCAAGTTCATATGGAAGCACGTCCTGCGCTGGAGGCTCAGCGCCCTCCCCGCGAATGCCTCATCATCCCTGCAGCCAAGCGATCACCTAGCGGCGGCTCTAGCGGCTGTGGCGCCGCCGCCGCCGCCGGCGGTGCAGCTGCCGGCCGCACCGGCGCAGGCTGGGAACAGGGATGGCGAAGCTCATGAGGAGGCAGAGTTGTCGACACAGCCTCCTGCGCTGGTGCCATCTGGCGTTCAAGAGGCGGCTGCAGCGGTATGGAGCAGCCGTGGTGATGGACAAGAGGCGCCGCCGGCGGCGGTGGCTGCGGCGGCGAAGGCCCCCTCGAAGAAGAGGGGCGCGTCAGAAGTGTCGGACAGGGGCTCCAACAATTTGGAGGCGACGACGGGGAGGAAGAAGGAGAGGACAAAGGTTCACATGGACGACGGTGTCGCACACATCGTTTGTCAGGGCATACGAGCAGCTGAAGGACCAAGAAGGTCCAAAGAAGATAAAGCAATGATGGAACTTGATGGTATATTTGTAACTAAAACTCAAGTCTCAAGCCATCTACAGTTGGACGGGTCTAGCGGCTATGGTGGCCAGTGGCAGATAGTATACCGACGAGGCGACAACGACGACGCGAGTTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MATSNVTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRKLRSGGRRAAAAGNSSKGEIKKRFRWPKIFNICKNLVCHALTKLLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWRLSALPANASSSLQPSDHLAAALAAVAPPPPPAVQLPAAPAQAGNRDGEAHEEAELSTQPPALVPSGVQEAAAAVWSSRGDGQEAPPAAVAAAAKAPSKKRGASEVSDRGSNNLEATTGRKKERTKVHMDDGVAHIVCQGIRAAEGPRRSKEDKAMMELDGIFVTKTQVSSHLQLDGSSGYGGQWQIVYRRGDNDDASS</aaseq>

Gene Sequence

<dnaseqindica>1..16#1233..1388#1529..1737#3022..3073#4751..5321#6436..6511#8138..8215#ATGGCCACATCAAATGGTAATGTCACTACTACCCGAAGCAACTATGTGGGAATGGGACCTAAAAAAATTGAGAACTTCACTTTGAGTCATTAAAATCCTCGGGGAACTACAATTGGTCATAAATCAATTATTAGACAGGAACACCTTCGTAGCGAGGTTACATCCGTCTTGTTGTTCGCACATATGGAAGCAACCAAGCTAGAGGAAATGAAATGGTACTTCAGATTTTCATGGTGCAGCTATTGCAAATGAGAACCTCATGTATTTTAGTACATCATTGTCATCAAATATGAAATAGCTAGTGCAACCAAGTCAAAGCTTTTCCACCAATGGCTTGCCAGCTAACTTCGGTATTATTAATGATCAAAGCCCTAGAACTAGTTCTGCGGCTAATTCTAGTGCTATACTGCTATATATAAATAATTAATCAAAACCCTGTGATCCAGGAAATGTGTGTTCCACAAACAATTGAACTTTGGTACAACAACAATATAATGTTGGATTGGATAGAATTATGAGTTCTAGATTATCAGCTAGATAATGACATGTTGATGAATAGCCTTTTTTATGGAGACCAACTCCAGCAAGGTGTAGTTCCTGCTATGGATAGGACCAAGATGCGCATGCTTTTGATACTATCAGTAACTTCAACTCAGTACCGCCTCAAGACCTTAACAGTGATACTCCCACCCATTAGATGATGAGAATACCAATGAAATGAATGGTGCATTAGGTGGAGTCTTGATTGAAAGCTTGTTGAATGATCCAGCATTTTAAGGCGATGAGACATACTGAATTATTTATTTGATGCAGTATTGTCTTCCTAGGTTCTATGCATATTTTCAATAGGAATTTAGTGAGGCTAGGGATTTGCTACTGGTCTCTGTCTTTTTAATTAATTGGGTGTTAATTAGGAGCACACACTTAGGTGTGTGTGTCTTTGTAGTGGTGTGTGCATATCTGTTTTCCAGGTAATCACAAAATAAATAGTTTCCCCTCCTTTTTTGAACCATAGAGCAAAATTATACTTCAAATTTCATATTTGTGCTGTCCATAGCAGATATCTACAGGTATATATATTCTAGTTGCGCATAAAGAGCTAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATATGTGTGAGCACATGTACAGGTCTGACTGTAACAAATTTTGAGATTACGTACGTTTGGCGTGTGGATGCAGTGACGCCCAAGACGGCGGCGCGAGATGCTGTGGAGGAGCTTCACGAGAACCCTTGGAGCTACGACATGGTCCTCACCGAGGTGCACGCGCCGGCTGGGATAGACGGCTTCAACCTCCTCCAGTACGCCGGCACCGACATGGATCTACCAGTCGTCGGTAAGTNGGTCGAGATAGCTAGCTAGCTAGCCGGCCATTGCCGTTACTTTCATCCAAGCCGTACTTAAAACTGAAACTTTTCCTATCTTAATTAATTTTGTCCATATACATATATGTGCCCAAAATTATATTTCTTGTAGTGTTCTCTGCGGACGACGACAAGAGGACGGTGTTGAAGTGTGTCAACAGCGGCGCGTGCGACTACCTGGTGAAGCCCCTGCGGCACGAGGAACTGAAGAACATATGGCAGCATGTGTACAGGAGGAAGCTGCGCAGCGGTGGTCGTCGCGCTGCAGCTGCAGGAAACAGCAGCAAGGGGGAGATCAAGAAGAGGTTTAGGTGGCCTAAGGTTTGTCAGCGTCGTCCTTCAGCTCGGAGTTGATAGTAAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTGAAATTTGAAAATAAGTTGTATTAATTTATTTTCTTCAGAAAATGCTGATTATTAATTGTTTTTTAATTAGTGTGCCTAAGTTGCTGATATATATTATTTCTGATGCATGTTTAAGTTGCAAATGCACGTTAATTATACTCTCTTATCATCATGATACTTACATGCTTTAGATTTCTGATTGACGTACGTTGTCAAGATATCGATCACTTCTACTATCGGTAGCACGGTTTATCCTTTTAAATTATTAATAGGTAGCTATCCACCTAGCTGGGGATGCCATCGATCAAATGAAGAGCATCAAGATATGCCTACAATATTGCATTTAATTACTTAGGGAGGAGAACTGCAGCACCTACGTATATATATACCCTAAGATCTTCCAATAAAAAAATTTCAAGTTATATACGTTCTGATTTATTAAGAAGAAAGCAGGTATCCAAGTCATTTATTTTTTAAAAAAAGAAACAAATCATGATTGCTAATTAAGATGACCCATTTTGAAGTGACCCTGATCATGTGTTTGTCCCAAAGGCAATGACCTTCAAGGAATTATCCTCTTCATTTTAGTAATCAAATTCTCAGTTCCTAATTAAGTAAAAGGAAGAGCATGCAGTTCCTAAGTACATAAAAAATCAAATAACCAATTTTGCAACTCGAAATTTGAGACTTGAAGTTATAATACCTTCATCCACTTCGATATGGACTAAATATACACACACACACAAATTTATCCTCAAATCGAAAGTTTTTCAAACATAGGAACGACCATTCAAAATTCCAATTTTCTCCACATGATTACCCATGAAACGAGAGTAACACAATGCTATCACCAAGCTAGGTTGCAACAAACCTTTCAAAATTAAATCCCAGCAAACAAACCTGAATCAGCGCTGTATATGGGACATTTATATATATAAACAAACTACACGCAAATTTACTATAGATATGTATGATCCATTCCATGCAATAATTCCCTTACTGCGTCTTTGAAGATCAGATTGATCTACACAGTTCGAATTTTTAAAGTTGGTGAAAATGGACTTTCCTTTGCTCGGGTATTGCTTGCTGGTTGATGGACAAAACATATTACCTTGACTATTTTGATGCTACCCTTGGCGGTTTGTGCTTGCCAAGAAAATCCTGGATTCTTGTAGTTACATATATAATATTATTACCGTGACGTAATATAGATTTTCAATATATGTAAAAACTTGGTTTGCCATGCTTTAACTAAGCTGCTAGGTAATTTACTTCTTCATGCGCATAATTCGTCTGTAACTTGACTTGTTTTTCCTTGAGTTAATTCTTCTTGCGATGTTAAAATATTTCCACATATGTTTTTGTAAAATGTGTCAATTCAGAAAATATGCTGATTTAATCATTGATCTAGAACTTAACTTTTTTTAGATAAACAGTATAGACTTTTGGTTGTATTTTCTTATATTATTGATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACCATTGCCATCGAACATGAGACAACCAATACAGCCAAGACAAAGCTTGCCTAAAAATGGCGTGGCAGCTACTTCAGTGCTATCAGTGATCAAACTCTGGGACTAGCTACGCAACTAACTCAACTACTGTCAATAATAAAAACACTATGACCCAAGAAATGTATATTCTACAAACATTTCAACTTGGGAACGGCTATAATGTGATGTTGGATTGTCTAAAGAATGGTAGTTTGGATGATCAACTAGATAGATAGTAACATGTTGATGAACAACCTCTTTCATGGAGATAAACTCTAGCAAGGTGTAGACACGGTTATGAATGGGACCCAAGATATTCTTGCTTTTGATACTACCAATGACTTCCACTCAATGTAGGCTTAATAACGATATTCCCAGCCATGAGAATACCAATGGAATGAACGACACACTAGGTGGATCCTTGACTGAGGGCATGCTGCATGATCCAACACTTCAAGGGTATGATATTGGTCCCTATTTATTTAATTAGGCGTGTGTTAATTAGGAGCACACTCATAGGTGTGTGTATGTAGTAGTGTGTGCGCGTATGTGTCTTCCTTGTAATCACAAAATAAATAGTACTTTACACTCCTTTTCCAAACATAGAGCAAAATTACATTTAGGTTTTACCATTGCGCTTACATAACAGATGTCTTCTAGTTACACACAAAAATTGCAACTTCTTTTTTTCCATATTTTTTGTTTGATGAAACAAGCAATTATGATCATAATAATGAAGAAATAATGCTATTCCATGTTGATCATGCTATAATAACACATCCATGGGAAGAAATAATATGCCAACACATGGTTGTTAAATAAGTGGGGTATGCATAGACACTCACACTTACCCCCTACCCCCGGCCCACCCAGTCACCTATGATACACAATAAATGAGGCACACGCATGTACACCGAACCCAACTCCCCTCTCCCGCCAAGCACACCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCTATATGATTTGGCTATATTTTTATGTCCCTTTTTGTCGGATATCTGCAGTGACGGGCAAGACGACGGCGGAGGAAGCGCTGAAAGAGGTGGACCAGAATCCGGAGGATTACTTCCACATCGTCATGACCGACGTCCACATGTCAGGAATGGACGGCTTCGATCTCCTCCACAGGATCAACGGCCGGGTCCCTGTCATCAGTTAAGTGATCAGATCCATATGCTAACTGATCGATATATATGATCGATGTATCACATGGACACTATTGCTCTCGCTGATCTTTTTCTTCAAAAATATTTTTGTTTTCTTACTGTTTTTTTTTTGCTTTGAGAAAAAATTCTTTCTGATTTTGCACGGATGATGACAATTAATAATACATGTGTCTCACAGTGTTCTCCGAGGGCGAAGATGTGGTGATGGTGATGAGGACGGTGATGAACGGCGCATGCGACTACATGGTGAAGCCGATGACATCAGAGGCGATCAAGTTCATATGGAAGCACGTCCTGCGCTGGAGGCTCAGCGCCCTCCCCGCGAATGCCTCATCATCCCTGCAGCCAAGCGATCACCTAGCGGCGGCTCTAGCGGCTGTGGCGCCGCCGCCGCCGCCGGCGGTGCAGCTGCCGGCCGCACCGGCGCAGGCTGGGAACAGGGATGGCGAAGCTCATGAGGAGGCAGAGTTGTCGACACAGCCTCCTGCGCTGGTGCCATCTGGCGTTCAAGAGGCGGCTGCAGCGGTATGGAGCAGCCGTGGTGATGGACAAGAGGCGCCGCCGGCGGCGGTGGCTGCGGCGGCGAAGGCCCCCTCGAAGAAGAGGGGCGCGTCAGAAGTGTCGGACAGGGGCTCCAACAATTTGGAGGCGACGACGGGGAGGAAGAAGGAGAGGACAAAGGTTCACATGGACGACGGTGTCGCACACATCGTTTGTCAGGGCATACGAGCAGCTGAAGGACCAAGAAGGTGAGACCCCATGGATCCAAGTAACAACATCACGATATATATATACTCCGTCCCAAAAAAAAACCCAATTATGGGTTTGAATCTAAACATACGCTATGTTTAGATTCAAATTCAGGATTGGGTTTTTTTAAAAGGATGGAGGGAGTATGAACTAATGCATCGATCCCTATTTGCTTTCTTGCATCTATTTTGAATGTGCTTAATTTAATCAATGCATGGTTAATTATCACTTGCATTGTACAAAGTAAAGCATTTACTTTTCATCGTATTATTGTGATTACATAATGTTTTTGGAATTCCTAAGGTACCGTACAGAGTCTACGTTGGACTAGTGCAGTCGTCCAAACATGAAATCAACCATTAAGAATAGTTGGATAATTGGTCCAATTAAAGTTAGTGCAGCATTTGTGGGGAATTTCTTCAGTAGCTGAGAAACTAATCAAATGCAAGATTTATTTGCAAAGGCTTCATACAAAATTAAAAAGATATATATAACTGATCATGTGCAAAAACATTAATTCATAACTTCTTTACTTAATTTGTAATCTTACCTAGATTTTTTTTCTTTGAAGTGCTTACCTATCATATATATTTATGTATAACTTTCTTAGCCATTACAGTAGGATCTTAGCCATCAATTACAGTAGGATCTTAGTTATAAAGAGAAGGCACTGACAACAAATTTGGGATATAACTACATCTCATATACTACACGGATGTGATCTTATCACAGCACTCCTAATATCAGCCATGGTAGTATGATTTTAATTTGTAAGCATTTCCTGAGGTAGAAATGGCATGACCGAAGGAATGCTTTATGTTTAATATATGAATATAGTGCTCTTGTGAATCTATTTTCATAACACTTCTCACTGGGCAAACTTATTTGCGATTTGTGATGTTAATTTGCGTTGTTCCATGTTTATGACCTTGAAGGATTGAATTCATTGAGATTTTGCTCAAGGCAAATTAATTTATAACTTTTCATATCAATCTTGTTAGAAATGAAACATGAGCACCTGTTAATCCCATACTAAATTCACAAGTACACATGATCATGGCTACAATCTTTTAATATTTTCTGCGTCTGACATATATTGATTTTCTTATGCAGGTCCAAAGAAGATAAAGCAATGATGGAACTTGATGGTATATTTGTAACTAAAACTCAAGTCTCAAGCCATCTACAGGTCAGTATATATTTCTGACTAATATATAAACTAATATTTCTTTGGTATCTTTCAGTGATGACATATATATATATAGTTAATGTGTATTAGTTATTGCATAAATTTTAGATTAACAAATCAATGTTCTGGGGGAATCCAAACTAAAACGCATACTTGGTTATATCTATATATTGATTTTTTTTGCCATATTCCTCACTATGTCCAATATGATTGTTCGACATTCAAGAAATACAGAAGCTGGTTAGAAAATGAAAGAAAAAAGGAAGAAGCAACAAGCAGCTCACCATGCAACCCACTGAGTTACACCAACTGCCTAGATAGAGGTTATAGTACTTGGAAGCAAAGTTCAGTCATAACTGAAGGACAGCAAAGTTCAAGTTTTTCTGGACGGCCTATTCATTCCATGGCCACATCAAATGGTTGTCTAACTACGACTGATACCCAAGCAGGCAACTATGTGGGAGTGGGAGCTAAAGAAATCGAGAATTTCATTTCCAGCCATCAGAGATCTCTAGGAACTGCAATTGGTCAAGAATCAACTATTGAACAGGCAAGCCTTCATAGTGAGATTACATCAGTCAGTCGTGATGCTCATGAAAATGGAAACAGCCAGGCTAGAGGAAGTGCGATGAGCAATGGTACTTCAGGTACTCGTGGTGTGCTTGTTACAAATGAGACCTCCTGCATGTTGTTAGTGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGATTCTCTGTACGATGTCAAAGGGAGCTTTAAACATTTCTTCCTTAGCTTAGCGCAACCACTGTGCACAATAATAAAGGGGNTGTGCGCACACTCAACCCCCCCCCCCCCCCCCAATTCACCCATCAGCGACAATAAATGGGGCATACGCACATGCGTACAAACACCTTCTCACAAAAACGAAAAAAACACACACAGAAATATCATAATTTTATGAATTTTTCAATGAACTGACCCATGCAGTGGACGTGTCCTCGCATATGTGTATTCTGAGAATACTTACAGAATTTGTGATCTCCTATTTAAGGTATTCATACTACTTTGTTCTACTGTTTATTTAGTTGTCAATTATACTTGTAATATAATTTATCGAAAGTAAATTATTGTATCGTAATTTGCAACTGCTTGATTTATTATTTACCATGTTAATAATATTTATCTGTGTCATTTTAAAGGATACATGCTTTATAAAGTATATATTACTAGTAAAAAGATACTTAGGACCTATAAAGTCAAATTCGCCTAGGGCCCTCAAAACTGTAGAGTCGGTTAGTGGCAAACGCAGGGTTAAAAAAAAAGATGGGGTGGAGATACTCGCTTTATAAGGATACCTAAACACAACAAATATCGTATTTATACTATAATTGCATAGAAATACAGTATAATCAATAAATTAAGGCAAACAAAAACATTTTAAAATAAAGCAATAATCTTTGTGCCATACATAATTCATCATACACCAAAAAATAATAGTAAACATGTCAATTTGCAAATATTAGTCAATTCATAAAGCATTGTTGATAGATATATTTAAAAATTGATAAATATATGAGAATACATACTGCTAATAAATCACTGGCCATGCGACAACAGTTGGACGGGTCTAGCGGCTATGGTGGCCAGTGGCAGATAGTATACCGACGAGGCGACAACGACGACGCGAGTTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018105

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018105&oldid=46861"