Os11g0657300

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0657300| Description = Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)| Version = NM_001074928.1 GI:11548...")
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Gene Name

Os11g0657300

Description

Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)

Version

NM_001074928.1 GI:115486504 GeneID:4351052

Length

2074 bp

Definition

Oryza sativa Japonica Group Os11g0657300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28155783..28157856

Sequence Coding Region

28155866..28155871,28156603..28156690,28156994..28157031,28157144..28157208,28157547..28157610

Expression

GEO Profiles:Os11g0657300

Genome Context

<gbrowseImage1> name=NC_008404:28155783..28157856 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28155783..28157856 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgactgttccagttaacccaaaacctttcttgaacaacctgacagggaagcctgtcattgtcaaacttaagtggggtatggaatacaaaggataccttgtttctgtggactcttatatgaatctgcagctggctaatacagaggagtatattgatggacaattctctggaaacctgggagagatactgattaggtgcaacaatgttctgtatctccgaggcgttccagaggatgccgagatagaggatgcagaatga</cdnaseq>

Protein Sequence

<aaseq>MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQ LANTEEYIDGQFSGNLGEILIRCNNVLYLRGVPEDAEIEDAE</aaseq>

Gene Sequence

<dnaseqindica>84..89#821..908#1212..1249#1362..1426#1765..1828#accaacccctcgctctcccactcatctcgtcggcggcggcggcggagcggaggagcacggcgagctagctgctctaccttggaatggcggtaataccctctaatctctccctctctcgctctcgatatttcgtcgcgtgatttggtgtcggctgttccggtagtttctggttcgcgtggtagatcgctgtaggctgaaatgtaataaggggcataataattcagctcaatattgtgataaatagttgaagaaatcgacaaactcgccgctttacatcaggattggctgagctttgactagaattggagcttgagaaattagctaatatatagggcttttttttttttttgcggggagctaatatatagggctttaacatagtcaaacaaagtcagcagtgtgtttttatactgcatggtatacttaatccggaagaaatttggcttgatacggacattgcatactgtgcttgattatttagtcctttttttttccttctgattttcttgatggtgaattggtgattattcaattgtattcagttccaagtggtgcctccgcgtatttagtatctttacgccatgttgttgatgtcttgtttaattgagcccaatgttgttgatagcttgatattgtgccatccaatgaaataatgaaaataggaatattgtgctgtgcatgctattcctgtgttccatgctggcaaactgccatgcgcatacaatgtacacattgaatttgcttgtaacagatggaatttcgttctttttatacatctttcctgttctgctcttaatggatggattgtttcttaatgcagactgttccagttaacccaaaacctttcttgaacaacctgacagggaagcctgtcattgtcaaacttaagtggggtatggaatacaaaggtaatctatacttttacctttcacttcttcttcacttattacatgcttaagccagtgcttgaaaatttcagaatgaaatctctgagatttcaggaaatccatatttgcccattttgtgcatgaaatttcttcttgccatagataattaacttcatggcacgtatcaataccatccactttcactggttttacaatggaattgcaatggaaatcatgtattaaaatgggtcctcttgttgtaatttagttttcagattttgcctcaccattgattatgctgatggtaattttttactctttaaggataccttgtttctgtggactcttatatgaatctgcaggtattgttttgtgctttatttcagttaaattcgttcaccatctaccctttaatatgaatcaacatgccatattcatttgctgtaatttactcgtgtcccctactgctttcagctggctaatacagaggagtatattgatggacaattctctggaaacctgggagagatactgattaggtaactcgacctatgatcctggacctgattcatgtgtagttatcactggtacttttgtacttacagagttacagtgataactgataacctgttgcctgcttgcacgctatcaccctgttttccaatctgactgataatatgaagagatagtatgatagatttaaacaaaaacatttgagtccatgacaagcagcagcctttacaactttgaagggggaaaaatgtggattaacttgttattgttctttgcttttaaagaaatcttttgctgatcaaactgttgcacataccatattcctttgtccaacgtgtacttatttgttttgttcgacctacaggtgcaacaatgttctgtatctccgaggcgttccagaggatgccgagatagaggatgcagaatgagataacctggacctatgcgcagatcgatttgtgtaatatgcagctgacatgaacaatttaagtgtcatgtaaaattgatgcacagattccttgttgacctggatcttaactatggtcatgatatggttatattaggcattgaaactgatttcatattgactagtgtcattgctcaaatgtgtgagagatcatatttcgtgagataatataccatttgcctgtcgagatggatgacgaactgaacat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0657300, RefSeq:Os11g0657300