BGIOSGA018177

From RiceWiki
Revision as of 02:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018177| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018177, complete gene.| tag = OsI_197...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018177

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018177, complete gene.

LocusTag

OsI_19709

Ensembl Transcript ID

BGIOSGA018177-TA

Ensembl Protein ID

BGIOSGA018177-PA

Length

3325

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18918279..18921603

Sequence Coding Region

18921499..18921603,18920363..18920464,18920121..18920267,18919456..18919521,18919145..18919242
,18918279..18918585

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18918279..18921603 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18918279..18921603 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCGACTCGTGGCCCGGTCGAGGAGAGGCCTAGCGCTCGCCCTCTCCCGCGCCGGCGCCGGCGCCCCGTCGCGGCCCTCCCCTCCTGGCCTCGGCAAGACTCTAGGGTATGAGCCAACATCACATCTCCATGGTGCTCAGTTTTTACCTTGTTGGTTTTCAACTATTGCATCTAATGGATCTCACATGCAAAAGGCACAGGAGACATGTAAGCCAGTTGCTGGAATGGAACACTCTGATGCACTGAAAGTAATGGAAGGAACCTCTCCTAAAGTTGTGGCATTCAGCCCACTAGAAGCAGCTATCACTAAACCTAGAAGCAGTCCCTTGACAATTGAAAGTTCTAAAACTCCAGTCCTACATGAATCCAGCGCTATGCTCCTTTTTGGAGGTTTTGTTACTGCAGAGATGAATGATCAGTCCTCCTTGGTGAACACGCTGGAATTTCCCAATAATTTGCAGTATCCCACAACATTCAGAAAACCAAATTCCTTGGAAATTCACGACACAAGTGAAACCTCTGAACATTTTCACCGTGGCATTCTGAATTCTGATCCGGCAATCAATCAACCAGCCCTTGCAGTTATTAGTGAAGTGCAGATGTATCATGTATCTGTCCAGCCATCAAATGCTGCAGTGGAGAACAGGGAACTGAAGGGGGTTCTTGGATTTGGCTTCTTTACTTTTTCGCTGATTTTATTTTTTTTTTCTCTGGCACCTGCTTTTATTTCTTCATATCTCATATTATCATCACCATATGGGTGGTTTTGCAAGAGTGGACCTGAGGTTCTTGCAGCAATGCAGCCGCAGGACCCATAG</cdnaseq>

Protein Sequence

<aaseq>MASRLVARSRRGLALALSRAGAGAPSRPSPPGLGKTLGYEPTSHLHGAQFLPCWFSTIASNGSHMQKAQETCKPVAGMEHSDALKVMEGTSPKVVAFSPLEAAITKPRSSPLTIESSKTPVLHESSAMLLFGGFVTAEMNDQSSLVNTLEFPNNLQYPTTFRKPNSLEIHDTSETSEHFHRGILNSDPAINQPALAVISEVQMYHVSVQPSNAAVENRELKGVLGFGFFTFSLILFFFSLAPAFISSYLILSSPYGWFCKSGPEVLAAMQPQDP</aaseq>

Gene Sequence

<dnaseqindica>1..105#1140..1241#1337..1483#2083..2148#2362..2459#3019..3325#ATGGCGTCGCGACTCGTGGCCCGGTCGAGGAGAGGCCTAGCGCTCGCCCTCTCCCGCGCCGGCGCCGGCGCCCCGTCGCGGCCCTCCCCTCCTGGCCTCGGCAAGGTGCGCCGCCGCCCCTCCCTAGTCCCCCACTGAGACTCTCGCTTTTGTTGCGTAGATTTTAGGTGTTTACGAGATCGAAGTGGCTGGGTGCGAGCGCTGTTGATCCGATTGCCTCTGGGATGATTTGGTTGGTTCGGTTACCTGTGGTGATAGTATTGTGTAATTGGTGTGTGATCTGATGCAGCCTCTATGTAGATTTCGATATTGCCCTGTTTCGTTGTGAAAGATGTGTGTGCCCTCTATTGGTGATAGGTCTGAGATGGAATGGATATACCAGTAGAGGCTGGGAGCCTTAAGTTGTCCAATTGATTAGCTGAACTCTACTTATATGTTCCCATGTTTTGTGAGTACTGGACATGTTCTTCCTTGAGCAGAAGATTAGCTACTGTAGTAGACTATTACTCCATTCGTCCTAAAATATAAGGGCTTTTGGTTGGATATGACACATCCTAGTACTACAAATCTGGACAGAAGCTTGTCTAGAATCATAGTATTAAGATGTGTCACATCTACCCAAAAACCCTTAAATTTTGGGACAGAGGGAGTAGTAAGTTTCCGTTTTGAAAAAAAAAAAACCTGTAGTCGAAAACTCTTAGTTAAGATCTGCACGCTAACTTTATATGGCATTCACCTCTCCATACCATCGGAGAGTATTAACTGACTTTTGATCCATTCATGTTTTGCTTAAATTTCTGAGCTCTCATGCTAGTTAGGAATGAAACTATATCCTTGTATGGCACACACCTTCTATCTGATGAATAATTTGTCTTCTCAAAATTGAAACTTCTGAAATTTCATTCAACTACTATTGGCCAAATTGAAGCTTGACATCTTGCTTTTGGCATGACTTACCTGATATTATGCATACATTTAGGCTTGAAAAACTCATCTACAATTTACCAAAATGATAAATGCCCAATAAACTAATTTTGTTTGCTTTGTTGATTATGACAACTGATATTTTTTTGAAAGACAATTGCCTCTGACTTTCTGTGCTCTAATTTGCATTTCTGACATGATATTTATGTGTGCAGACTCTAGGGTATGAGCCAACATCACATCTCCATGGTGCTCAGTTTTTACCTTGTTGGTTTTCAACTATTGCATCTAATGGATCTCACATGCAAAAGGCACAGGTTTGTCTCCAGCTAGATTAGTGCTTGATTTGTCAGGTGCCCTGCTACATGTTGAATGTTCATCGGGTTGATGTTTTCTAATCTTACTGATACAGGAGACATGTAAGCCAGTTGCTGGAATGGAACACTCTGATGCACTGAAAGTAATGGAAGGAACCTCTCCTAAAGTTGTGGCATTCAGCCCACTAGAAGCAGCTATCACTAAACCTAGAAGCAGTCCCTTGACAATTGAAAGTTCTAAAGTAAAGCGATCAGAGATTGCAACGCTAGTCACATTTTACATGATCCCTTCTCTGCTTGTTTCCTCAAAAAATGGGCTTGCTACCTCTATTTTGGTTGGCGCAGTATTCCATCAAATATACATGTTTCACAAGGAGATATTTCTGGACTATGTGCACCATGATATCACCAGGAAGTGGGCTTTGATATACTTCAAGCTGCTTTTGTTGATCATGGCAAAGGAAACCATTGTGTATTTCAACTTTATCTGAGTTTTATCTCTTGCAGAGGGACAATCTATGTACTCATCCATACACCAGAAAAAATGACGGTGGTGGATAAAATTCTGGCGCCTTGTTCTCTTCATGGACATTTTCAACATTTTTCCTTCTCAACTTCATTTGTATATGCACTTGAAAGAGGATGATTAGTGATCAATGAAGCAATTAGTTCGACTTCATTCTTGTTTATAATAATAGCAACTGATATGAACTGTTTGGTATTTGCTAGCACGATGCAGCCATATGGATTTTGTTTTCCATGTATGAATTATCATCTTATGTGCATATATTTCTCCTTTTGGAGGCTTGAGCTGCCATTATTTTTTTTGCGAATCCTTCAGACTCCAGTCCTACATGAATCCAGCGCTATGCTCCTTTTTGGAGGTTTTGTTACTGCAGAGATGAATGTGTGTTTAACTTTATTGATTGGTTTGATTGTTTCTGCAGATGTTACAAAGATTGGCCGGTTGCAGTTTGTTTGAAATGCTAGGATTCAGAAGTCCCTCCAGATGCTTGCTTCAAATATACTTACTACTCAGTAAATGATAGGAGTACTGCTCTGTAAATGCATGAAAAAACAGTGATGGAGAAATCTGATGCTTGTGTACCCAATGATGCAGGATCAGTCCTCCTTGGTGAACACGCTGGAATTTCCCAATAATTTGCAGTATCCCACAACATTCAGAAAACCAAATTCCTTGGAAATTCACGACACAAGGTAAAGAACAAAAACCCATGACGTTTTGCTTTGCAATTTGCAGGTAGGGCTCTGCTGTCCTTGCTGCTGCTGCTGGATTTGAAAGAAAAAAACCTGTGTACGATGTACGTACGCCGGCTGCATCCTTGTACAGCCATGTTCATGTGAGAGCGGAAAAAACTGCCTTCCAGCTCAGCTCTGCAAGGCTGAATTGCCGCCTGGATCCTGCGGCCGCCATGTTTACCCGGGACGGCCGGCCGGACGGCGGCGACCCCATCGGCTGCCACGCGCACATGCCCGGCGACCGACGGCCGCCGGTGCTGACTGTGAATTGACATGAATGCTGCCACTGCCTGTGCCTGCAATGTCCCAGCTTGCTTTGCAGGAGGCAGCAGCAGCAGCAGCTAGCTGTGGTAGAATGGCTGCTTCTGTGACCGTCTCTGCATTGCAGAGAGATGCAGTGAGTGTGTGTTGAGTGACTCCTCCAGCTGGGAGCTCCAGGAATTCACCTCCCCACACACAGTCACAGTCACAAACACACTCCCAGTGCATTACCTGTCTGTCTGCACTGTGCATGCAGTGAAACCTCTGAACATTTTCACCGTGGCATTCTGAATTCTGATCCGGCAATCAATCAACCAGCCCTTGCAGTTATTAGTGAAGTGCAGATGTATCATGTATCTGTCCAGCCATCAAATGCTGCAGTGGAGAACAGGGAACTGAAGGGGGTTCTTGGATTTGGCTTCTTTACTTTTTCGCTGATTTTATTTTTTTTTTCTCTGGCACCTGCTTTTATTTCTTCATATCTCATATTATCATCACCATATGGGTGGTTTTGCAAGAGTGGACCTGAGGTTCTTGCAGCAATGCAGCCGCAGGACCCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018177