BGIOSGA018195

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Revision as of 02:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018195| Description = BGIOSGA018195| Definition = Oryza sativa Indica Group BGIOSGA018195, complete gene.| tag = | tid = BGIOSGA018195-TA|...")
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Gene Name

BGIOSGA018195

Description

BGIOSGA018195

Definition

Oryza sativa Indica Group BGIOSGA018195, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA018195-TA

Ensembl Protein ID

BGIOSGA018195-PA

Length

2392

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18539355..18541746

Sequence Coding Region

18541055..18541746,18539355..18540960

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18539355..18541746 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18539355..18541746 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAAGTGGCATTGGCTAGCTTACGATTGGCAGCATCACCGATCCTGAACAAGCTCCTCGCTGACGCTTCAACATACCTTGGAGTGGACATGGCGAGTGAGCTCCGTGAACTGGAGACCAGCATCATGCCGCAGTTCGAGCTGTTGATTGAAGAAGCTGAGAAGGGCAACCACAGGGCCAAGCTGGACAAATGGATACGGGAGCTCAAAGAAGCCTTGTACAATGCCGAGGACCTGCTGGATGAGCATGAGTACGACATCCTCAAGCGCAAGGTGAAGAACGGAGGCGAGGATCCTTCTCCAGATCTAGAGCATGCCTCCTCCATCGGTTCCATCATTAAGAAACCTATGCGCGCAGCATCAAGCAGCTTGTCCAATCTGCGACCGAAGAACATAAAGCTTGTACGCCAGCTGAAGGAGCTCAAGGCCATCCTAGCGAAAGCAAGGGACTTCCGTGAAATGCTTGGCTTACCGGCTGGTAGCAGTGTAGAGGGGGCACAAACTGGACATACAAAAACAGTGGTCGTTACTGCAGCGACATCAACCCCACCACCCCAGGTGTTTGGTCGCGACGCGGACCGCGATCGCATTGTTGATCTTCTTACCCAACACAAGACTTGTGCTGAGGCCAGCCGTTTCGTTGTCTCCATTGTTGGACCTGGAGGCATGGGGAAATCCACCTTGGCTCAGGAGATCATCGAGTCTGCAACAAAAGAGAAGTGTCAAAGGGTTGGTAATATGGACGTTCTCCAGTACAAACTAAAAGAAATACTGCAGAAAAAAGAGAAAGTCCTGCTTGTGTTGGACGACATTTGGTTCGATAAATCCCAGGACGTTGAGGAATGGGACCTGCTACTTGCTCCCATACTATCTTCTCAGAATGGGGCAACCAAAGTTCTGGTAACTTCTCGATCTAAGACACTTCCACCTGCTCTTTTCTCTGAAGATGTCATTGATTTGGAAAATATGAAAGATACTGAGTTCCAGGCACTCTTCAAACACCATGCTTTCTCTGGAGCCACAATTCGAGACCTCCAGATGTGTGGCTGGTTCGAAGAGCATGCAGTGAAGATTACTGAAAGGCTTGGAAGATCTCCTTTGGCAGCAAAAGTTGTAGGTTCCAACTTGAAAAGGGTGATGAATATCGATGATTGGAAAGGTGCTCTCACTATAAAGATAGACAATTTAAGTGAACCTAAGAGAGCTCTGTTGTGGAGTTATCAGAAATTAGATCCATGTCTTCAGAGATGCTTTCTGTATTGCAGTTTATTTCCAAAAGGTTACAAATACATAATTGACGAGTTGGTTCACCTTTGGGTTGCAGAGGGATTTATTGATGCACGTGATACGAATAAAAGAATGGAAGATACCGGCATGGATTACTTCAAAGAGATGGTCTCTGGATCCTTTTTCCAACCATTTTCTGAAAGATTTGATAGTACGGTGTACATTATGCATGACCTCCTTCATGATTTGGCAGAGTCACTCTCTAGAGAAGACTGCTTCAGATTAGAAGATGACAAGGTGAGAGAAATACCATGCACTGTTCGGCATTTATCTGTTCGTGTTGAGAGTATTATACAACATAAGCCAAGTGTCTGCAAGCTACAACATTTGCGAACTCTTATCTGCATTGACCCACTAGTGGATGTTGGGAGCAATATTTTCGAGCAGGTAGTATTGAATCTGAAGAAGTTACAAGTACTTTATTTGTCGTTTTACAACACTAGAAAGTTGCCAGAATCAATCGGTCAGCTAAAGCATCTTCGGTATTTGAACATCAAGAAGACATTGATTTCTGAACTACCAAAATCATTATGCGATCTTTACCATTTAGAGTTACTTTATTTGCGTCCGAAATCGAGGTTACCTGACAAACTCTGCAATTTATGTAAGTTACGACATCTTCAAATGTACTCTGATGGATTGGAGCTGTCACGGATTCCTGACATAGGCCGGCTAACTTTGCTTCAACGTATTGATAGTTTTCACGTCCTAAAACAGAAGGGACATGAGTTGCGACAGCTCAGGAACATGAACGAAATTGGTGGGTATTTATCGCTCAGAAATCTTGAGAATGTGATTGGCAAGGATGAAGCTTTAGAGTCGAAGCTGTATCAGAAAAGTCGTCTTGAAGGATTGACGCTTGAGTGGAATGATGCGAATAACATGAATCCAGAGAATTGTTTACATGTTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGATGATTCAATGGCTGCCCCCTCAGGTATTGTTTGGATAA</cdnaseq>

Protein Sequence

<aaseq>MAEVALASLRLAASPILNKLLADASTYLGVDMASELRELETSIMPQFELLIEEAEKGNHRAKLDKWIRELKEALYNAEDLLDEHEYDILKRKVKNGGEDPSPDLEHASSIGSIIKKPMRAASSSLSNLRPKNIKLVRQLKELKAILAKARDFREMLGLPAGSSVEGAQTGHTKTVVVTAATSTPPPQVFGRDADRDRIVDLLTQHKTCAEASRFVVSIVGPGGMGKSTLAQEIIESATKEKCQRVGNMDVLQYKLKEILQKKEKVLLVLDDIWFDKSQDVEEWDLLLAPILSSQNGATKVLVTSRSKTLPPALFSEDVIDLENMKDTEFQALFKHHAFSGATIRDLQMCGWFEEHAVKITERLGRSPLAAKVVGSNLKRVMNIDDWKGALTIKIDNLSEPKRALLWSYQKLDPCLQRCFLYCSLFPKGYKYIIDELVHLWVAEGFIDARDTNKRMEDTGMDYFKEMVSGSFFQPFSERFDSTVYIMHDLLHDLAESLSREDCFRLEDDKVREIPCTVRHLSVRVESIIQHKPSVCKLQHLRTLICIDPLVDVGSNIFEQVVLNLKKLQVLYLSFYNTRKLPESIGQLKHLRYLNIKKTLISELPKSLCDLYHLELLYLRPKSRLPDKLCNLCKLRHLQMYSDGLELSRIPDIGRLTLLQRIDSFHVLKQKGHELRQLRNMNEIGGYLSLRNLENVIGKDEALESKLYQKSRLEGLTLEWNDANNMNPENCLHVEXXXXXXXXXXXXXXXXXKRMIQWLPPQVLFG</aaseq>

Gene Sequence

<dnaseqindica>1..692#787..2392#ATGGCGGAAGTGGCATTGGCTAGCTTACGATTGGCAGCATCACCGATCCTGAACAAGCTCCTCGCTGACGCTTCAACATACCTTGGAGTGGACATGGCGAGTGAGCTCCGTGAACTGGAGACCAGCATCATGCCGCAGTTCGAGCTGTTGATTGAAGAAGCTGAGAAGGGCAACCACAGGGCCAAGCTGGACAAATGGATACGGGAGCTCAAAGAAGCCTTGTACAATGCCGAGGACCTGCTGGATGAGCATGAGTACGACATCCTCAAGCGCAAGGTGAAGAACGGAGGCGAGGATCCTTCTCCAGATCTAGAGCATGCCTCCTCCATCGGTTCCATCATTAAGAAACCTATGCGCGCAGCATCAAGCAGCTTGTCCAATCTGCGACCGAAGAACATAAAGCTTGTACGCCAGCTGAAGGAGCTCAAGGCCATCCTAGCGAAAGCAAGGGACTTCCGTGAAATGCTTGGCTTACCGGCTGGTAGCAGTGTAGAGGGGGCACAAACTGGACATACAAAAACAGTGGTCGTTACTGCAGCGACATCAACCCCACCACCCCAGGTGTTTGGTCGCGACGCGGACCGCGATCGCATTGTTGATCTTCTTACCCAACACAAGACTTGTGCTGAGGCCAGCCGTTTCGTTGTCTCCATTGTTGGACCTGGAGGCATGGGGAAATCCACCTTGGCTCAGTATGTTTACAATGCCCCAGACGATACAAGAACATTTTGACGTCACGATGTGGGTTTGCATCTCACGCAAACTTGATGTCCATCGTCATACAAGGGAGATCATCGAGTCTGCAACAAAAGAGAAGTGTCAAAGGGTTGGTAATATGGACGTTCTCCAGTACAAACTAAAAGAAATACTGCAGAAAAAAGAGAAAGTCCTGCTTGTGTTGGACGACATTTGGTTCGATAAATCCCAGGACGTTGAGGAATGGGACCTGCTACTTGCTCCCATACTATCTTCTCAGAATGGGGCAACCAAAGTTCTGGTAACTTCTCGATCTAAGACACTTCCACCTGCTCTTTTCTCTGAAGATGTCATTGATTTGGAAAATATGAAAGATACTGAGTTCCAGGCACTCTTCAAACACCATGCTTTCTCTGGAGCCACAATTCGAGACCTCCAGATGTGTGGCTGGTTCGAAGAGCATGCAGTGAAGATTACTGAAAGGCTTGGAAGATCTCCTTTGGCAGCAAAAGTTGTAGGTTCCAACTTGAAAAGGGTGATGAATATCGATGATTGGAAAGGTGCTCTCACTATAAAGATAGACAATTTAAGTGAACCTAAGAGAGCTCTGTTGTGGAGTTATCAGAAATTAGATCCATGTCTTCAGAGATGCTTTCTGTATTGCAGTTTATTTCCAAAAGGTTACAAATACATAATTGACGAGTTGGTTCACCTTTGGGTTGCAGAGGGATTTATTGATGCACGTGATACGAATAAAAGAATGGAAGATACCGGCATGGATTACTTCAAAGAGATGGTCTCTGGATCCTTTTTCCAACCATTTTCTGAAAGATTTGATAGTACGGTGTACATTATGCATGACCTCCTTCATGATTTGGCAGAGTCACTCTCTAGAGAAGACTGCTTCAGATTAGAAGATGACAAGGTGAGAGAAATACCATGCACTGTTCGGCATTTATCTGTTCGTGTTGAGAGTATTATACAACATAAGCCAAGTGTCTGCAAGCTACAACATTTGCGAACTCTTATCTGCATTGACCCACTAGTGGATGTTGGGAGCAATATTTTCGAGCAGGTAGTATTGAATCTGAAGAAGTTACAAGTACTTTATTTGTCGTTTTACAACACTAGAAAGTTGCCAGAATCAATCGGTCAGCTAAAGCATCTTCGGTATTTGAACATCAAGAAGACATTGATTTCTGAACTACCAAAATCATTATGCGATCTTTACCATTTAGAGTTACTTTATTTGCGTCCGAAATCGAGGTTACCTGACAAACTCTGCAATTTATGTAAGTTACGACATCTTCAAATGTACTCTGATGGATTGGAGCTGTCACGGATTCCTGACATAGGCCGGCTAACTTTGCTTCAACGTATTGATAGTTTTCACGTCCTAAAACAGAAGGGACATGAGTTGCGACAGCTCAGGAACATGAACGAAATTGGTGGGTATTTATCGCTCAGAAATCTTGAGAATGTGATTGGCAAGGATGAAGCTTTAGAGTCGAAGCTGTATCAGAAAAGTCGTCTTGAAGGATTGACGCTTGAGTGGAATGATGCGAATAACATGAATCCAGAGAATTGTTTACATGTTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGATGATTCAATGGCTGCCCCCTCAGGTATTGTTTGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018195

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018195&oldid=46951"