BGIOSGA018196

From RiceWiki
Revision as of 02:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018196| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018196, complete gene.| tag = OsI_196...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018196

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018196, complete gene.

LocusTag

OsI_19662

Ensembl Transcript ID

BGIOSGA018196-TA

Ensembl Protein ID

BGIOSGA018196-PA

Length

2746

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18524915..18527660

Sequence Coding Region

18527607..18527660,18527202..18527285,18527004..18527078,18526201..18526329,18525378..18525461
,18525180..18525254,18524915..18525109

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18524915..18527660 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18524915..18527660 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGACTCTCGCCCCGGTCCGCCCCTGGATACGGCACACAGAATGACAGAAAGGTAAAACGTCAGGCAATTGAGCGTTCCCTAGAGTTTGGTTCAAAGGCGGGCAACTATCTCCTGCGGTTCGGAGAGGACTCAGCTGCTGCAAGCTACTACTACAATATTCAGAAAGGAGAGGCATGCATGATTGACAGTGTGTATGACAGTATGAGTGAGTCAGGAGTAGAGGGGGCGCTCGGTCCAGGCGCCGGCGACGTGGCCGTTCTCGCAGACGTAGGCGCGGACGACGGGCTCGCCGTCGTCGTGGTAGCCGTAGAAGCTGCGGAGGCAGAAGGCGGCGTAGAGGTAAACCGTCAGGCAATTGAGCGTTCCCTAGAGTTTGGTTCAAAGGCGGGCAACTATCTCCTGCGGTTCGGAGAGGACTCAGCTGCTGCAAGCTACTACTACAATATTCAGAAAGGAGAGGCATGCATGATTGACAGTGTGTATGACAGTATGAGTGAGGAAAGGGCAAGCAAAGCATTTTCAGGTTGTATCAGAACTAAGGCTAGAGAGCAAGAACCTTGCAAATTCTACTTCATGAAGATAATAAAGCTGAAGGAGGTTGCAGTGCATGTACAACAATCAGGTCTACTGCAAATCAGCAGCAAGCAAGAACAGTTGATGCAAGTTCTGAATCCCCAGCTCATCAGCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MGLSPRSAPGYGTQNDRKVKRQAIERSLEFGSKAGNYLLRFGEDSAAASYYYNIQKGEACMIDSVYDSMSESGVEGALGPGAGDVAVLADVGADDGLAVVVVAVEAAEAEGGVEVNRQAIERSLEFGSKAGNYLLRFGEDSAAASYYYNIQKGEACMIDSVYDSMSEERASKAFSGCIRTKAREQEPCKFYFMKIIKLKEVAVHVQQSGLLQISSKQEQLMQVLNPQLISK</aaseq>

Gene Sequence

<dnaseqindica>1..54#376..459#583..657#1332..1460#2200..2283#2407..2481#2552..2746#ATGGGACTCTCGCCCCGGTCCGCCCCTGGATACGGCACACAGAATGACAGAAAGGTACTACTAGTAATTTGTCATACCATACAATAATATACAAGAACCAACATGATAAGTTTCTGTCCGTCAGATGGTGACCGAGCGGCTGCCACGCCAACGAAGTGGATAAAACAAATGCCTCTGCGTCGCCATTTTGCAGCATCATCAGCTCCAACGCTCCATGCAGCAGGCAGGCAAGTAGCCGGCAGTGAATCAGTTCCGAAAAGGCAGGAGAATCAACAGCCATACACTATCTCATAAACTAATCTTATACCATGCTACAAAGTACACACTGGCTATCCAAAAAAATTGTATGTTACACACTCCCTCTTTCTATATCAGGTAAAACGTCAGGCAATTGAGCGTTCCCTAGAGTTTGGTTCAAAGGCGGGCAACTATCTCCTGCGGTTCGGAGAGGACTCAGCTGTTAGTACTTCCACAGTTCCACTGCCATTACCCATTAGTTTAGGGGGAAAAAAAGAGCAACAAGTGGCTGTCATTGCCAAGTTGCCATTGATAATATCATAAAAAATTAAGCCCTTTCTGCAGGCTGCAAGCTACTACTACAATATTCAGAAAGGAGAGGCATGCATGATTGACAGTGTGTATGACAGTATGAGTGAGGTTAGTTGCCTCTGAGTAGCCAAAGATTAGGTATATGAACTAGATCGATCATAAGTTTAAATCCAATCAGGAAAGGGCAAGCAAAGCATTTTCAGGTTGTATCAGAACTAAGGCTAGAGAGCAAGAACCTTGCAAATTCTACTTCATGAAGATAATAAAGCTGAAGGAGGTTGCAGTGCATGTACAACAATCAGGTCTACTGCAAATCAGCAGCAAGCAAGAACAGTTGATGCAAGTTCTGAATCCCCAGCTCATCAGCAAGTAGAAAGCGTAACCGAGTCACTGCCTAATATCAAATACAACATCAACCTGCATCATAACTGTGTTCTTGTGCAAACCATCAGAAGTTACACTCTTAATCGATCGCGCCGAATCGCGCTGAGAATTCGCTCGACGGAAGCGCGGTAATCGCGTTATTAAGCTAGCTTAAGCATCATCTGATTCATCTCTAACAAGACAAAGAGATGCATATCACATCACATCAGCCCTGCATAATCTCCAGAGGTGATGATCTGATACCCACATTGCTAGTAGTATATACACATGGAGTAATTATCACAAGCACAAGTAAAGGTTTGCTTGGCATTCTTGGCAATGGCGGCCATGGCTGCACATCCATGAGAGAGCAAAAGCAGTAGAGTGGGCATACCGAACCATGGGTGTGGGTGTCGCAGTCAGGAGTAGAGGGGGCGCTCGGTCCAGGCGCCGGCGACGTGGCCGTTCTCGCAGACGTAGGCGCGGACGACGGGCTCGCCGTCGTCGTGGTAGCCGTAGAAGCTGCGGAGGCAGAAGGCGGCGTAGAGGTCCCAGGCCTCGGTGCAGCCGCAGAAGGCGCAGTCGACGGCGACGGTGGGGCGGCGGGTGTCCCGCAGGGCGCGGCGCACCTGGGCAACTCGGGAAGTCGTGGAACACGCCGCGGAACACCATGTACTTGCGGCGCTCCTCGGCGTGGACGCACCCGGGCCAGTCGCAGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTCTTTAGAGATTCATTGACCGTGATTTCTTTCACCTAAATCATCTGCGAAAACGAATTATAATTCCCCCCGGAGTTATGCAAACCGAAACGTCATTGCTTCATACTCATACGTTCTACTTCCTCCCAAAACTTCCATGGGACTCTAGCCCCGGTCCGCCCCTGGATACGGCACACAGAATGACAGAAAGGTACTACTAGTAATTTGTCATACCATACAATAATATACAAGAACCAACATGATAAGTTTCTGTCCGTCAGATGGTGACCGAGCGGCTGCCACGCCAACGCAATGGATAAAACAAATGCCTCTGCGTCGCCATTTTGCAGCATCATCAGCTCCAACGCTCCATGCAGCAGGCAGGCAAGTAGCCGGCAGTGAATCAGTCCCGAAAAGGCAGGAGAATCAACAGCCATACACTATCTCATAAACTAATCTTATACCATGCTACAAAGTACACACTGGCTATCCAAAAAAATTGTATGTTACACACTCCCTCTTTCTATATCAGGTAAACCGTCAGGCAATTGAGCGTTCCCTAGAGTTTGGTTCAAAGGCGGGCAACTATCTCCTGCGGTTCGGAGAGGACTCAGCTGTTAGTACTTCCACAGTTCCACTGCCATTACCCATTAGTTTAGGGGGAAAAAAAGAGCAACAAGTGGCTGTCATTGCCAAGTTGCCATTGATAATATCATAAAAAATTAAGCCCTTTCTGCAGGCTGCAAGCTACTACTACAATATTCAGAAAGGAGAGGCATGCATGATTGACAGTGTGTATGACAGTATGAGTGAGGTTAGTTGCCTCTGAGTAGCCAAAGATTAGGTATATGAACTAGATCGATGATAAGTTTAAATCCAATCAGGAAAGGGCAAGCAAAGCATTTTCAGGTTGTATCAGAACTAAGGCTAGAGAGCAAGAACCTTGCAAATTCTACTTCATGAAGATAATAAAGCTGAAGGAGGTTGCAGTGCATGTACAACAATCAGGTCTACTGCAAATCAGCAGCAAGCAAGAACAGTTGATGCAAGTTCTGAATCCCCAGCTCATCAGCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018196