BGIOSGA018203

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Revision as of 02:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018203| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018203, complete gene.| tag = UXS-5| ...")
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Gene Name

BGIOSGA018203

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018203, complete gene.

LocusTag

UXS-5

Ensembl Transcript ID

BGIOSGA018203-TA

Ensembl Protein ID

BGIOSGA018203-PA

Length

3449

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18325865..18329313

Sequence Coding Region

18328838..18329313,18327592..18327746,18326721..18326800,18326539..18326622,18326367..18326441
,18325865..18326185

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18325865..18329313 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18325865..18329313 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCTCCCCTCGCCACCCCGTCCTCCTCCTCCACCCCCGCCGCCGCGGCCGCCGGTTCAACCGCGGCGAACCCGCTGGCGCGGTTCTCGGTGGAGCCGGCGGTGAGCCGGCGGCAGCAGCAGCTGCCGGCGAGGCAGTTCGTGGGCGGGAAGGTGCCGCTGGGGCTGAAGCGGAAGGGGCTCCGGGTGCTGGTGACCGGCGGCGCCGGGTTCGTGGGGAGCCACCTGGTGGACCGGCTGGTGGAGCGCGGCGACAGCGTGATCGTGGTGGACAACCTGTTCACGGGGCGGAAGGAGAACGTGGTGCACCACTTCGGCAACCCAAACTTCGAGATGATCCGCCACGACGTCGTCGAGCCCATCCTCCTCGAGGTCGACCAGATCTACCACCTCGCCTGCCCCGCTTCCCCCGTTCACTACAAATGGCACAAGACCAATGTGGTTGGGACTCTCAACATGCTCGGATTGGCGAAGAGGATCAATGCCAGGTTCCTCCTCACCAGCACCAGTGAGGTCTACGGTGATCCCCTGCAGCATCCTCAAGTGGAGACTTACTGGGGCAATGTCAACCCCATTGGTGTGAGGAGTTGTTACGATGAGGGCAAGCGCACAGCTGAAACTTTGACCATGGACTATCACCGTGGTGCCAACCTTGAGGTTAGGATCGCTCGTATCTTCAACACATATGGCCCTCGCATGTGCATCGATGATGGCCGTGTTGTCAGCAACTTTGTTGCTCAGGCTTTGAGGAAGGAGCCTTTGACGGTTTACGGTGATGGCAAGCAGACCAGGAGTTTCCAATATGTCTCTGATCTGGTTGAGGGATTGATGAGGCTCATGGAAGGTGAGCACGTAGGGCCATTCAACCTGGGTAACCCTGGTGAGTTCACCATGCTGGAGTTGGCCAAGGTTGTCCAGGACACCATCGACCCTAACGCAAAGATCGAGTTCCGTCCCAACACCCAGGACGACCCGCACAAGCGCAAGCCTGACATCGGCCGTGCCAAGGAGCTCCTTGGGTGGGAGCCAAAGATCCCTCTCCACAAGGGTCTTCCCCTCATGGTCACCGACTTCCGCAAGCGCATTTTCGGTGACCAAGACAGCACCGCCACAACCACCGGAGGCCAACAAGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MXXXXXXXXXXXXXXXXXSSPLATPSSSSTPAAAAAGSTAANPLARFSVEPAVSRRQQQLPARQFVGGKVPLGLKRKGLRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNLFTGRKENVVHHFGNPNFEMIRHDVVEPILLEVDQIYHLACPASPVHYKWHKTNVVGTLNMLGLAKRINARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNAKIEFRPNTQDDPHKRKPDIGRAKELLGWEPKIPLHKGLPLMVTDFRKRIFGDQDSTATTTGGQQG</aaseq>

Gene Sequence

<dnaseqindica>1..476#1568..1722#2514..2593#2692..2775#2873..2947#3129..3449#ATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCTCCCCTCGCCACCCCGTCCTCCTCCTCCACCCCCGCCGCCGCGGCCGCCGGTTCAACCGCGGCGAACCCGCTGGCGCGGTTCTCGGTGGAGCCGGCGGTGAGCCGGCGGCAGCAGCAGCTGCCGGCGAGGCAGTTCGTGGGCGGGAAGGTGCCGCTGGGGCTGAAGCGGAAGGGGCTCCGGGTGCTGGTGACCGGCGGCGCCGGGTTCGTGGGGAGCCACCTGGTGGACCGGCTGGTGGAGCGCGGCGACAGCGTGATCGTGGTGGACAACCTGTTCACGGGGCGGAAGGAGAACGTGGTGCACCACTTCGGCAACCCAAACTTCGAGATGATCCGCCACGACGTCGTCGAGCCCATCCTCCTCGAGGTCGACCAGATCTACCACCTCGCCTGCCCCGCTTCCCCCGTTCACTACAAGTACAACCCCGTCAAGACAATCATATCCTTTTTTCTTCTTCGATCATATGCGTCTCTGAATTTGTTTCGTGCTTGGATCTTGATTTTTTTGGGTGCTCGATTTTATTTTTTTTTCATGCGTTTTGTTTTGTTTTTTTTGGGGGTGGGAAATGATTTGTGTTAGGATTGGATTTGATTTGTTGTTTTGTGCATGTAGTAGTTGGCTTTGTCAGATATCCTGCATCTGGGTGAAAACATTGAATCTGTCCCCCCCGGATTCAGGGTTCGTCCGGGGATTGGGAATCTGGGGGCGGGGAAGGGGAATTTGGATGCATGGAGCTCGGGATTTGCGCCACGTTGCGCCGTGAATTTTTGGAGGTTTCTGCCGTGGCCTCATCCTGAACACAGAGATTCACATGTGTCCCGCATTGCGCTGTTTAAAGCAGAGTTTGGCTGCTTCGGGTGCGGCATCTTGATCAAATTCGATCAATCTTGTTTTGCGTCGTTTCAAATGGAAGATCTCGAGTCTTTGCACCGTCTTACTCTTTTAGAATTTTTAAAAAAACATACATTTTTTTTATAATGTTAAGTTCAATTTAGAGTCCTTTTGATAGAAGAGCATAAAAGCGGTAGTACTATTGCGATTAAGAATTTTTCAGAATGAGTCCTTTTGATAGAAGAGCATATTGTGATCAAGCATTGACCAATCGAGTTACGTACAGTTTACTTTGCTTGATGATCTCCTAACGGGGGAAGCAAGCCAAAGGAAACGTGCGTTCTGCTTGGATCTAGCTGAGCTGTCGAGTGAGTGTTGCTTAAATCTGACATAAAGTTGTGGGTTTGATTAGCCGAAAAAGCAAGGTCCAAGTCGCCTCTGCTGTCCCCTTTTCTTTCTAACCAACTTTGCTTACTGTTCACTTCACATGATCTCTTTTTTTGTTGCCTGCTTTTGCAACTACTAGTGTAGTGGAGATTTAGCCTAACAACCAATGGAAACATGGGAGACACATGAAAACGGAGCCTGACCTTTGTTCTTTCATTATCATCGTTAGTACCTGTATTGTTTTTGGAAAATGGTCTATGTTGAACTGTGTAAAGCCTTAACCTTTGAGATGGCACAAGACCAATGTGGTTGGGACTCTCAACATGCTCGGATTGGCGAAGAGGATCAATGCCAGGTTCCTCCTCACCAGCACCAGTGAGGTCTACGGTGATCCCCTGCAGCATCCTCAAGTGGAGACTTACTGGGGCAATGTCAACCCCATTGGTAATAAACTACTCTCATACTCCATCAGATCAATTTGTTATGTTTCTTGGGTCTAGCATGTTTCGGTAGCTTATTGTTAGTTGAGATCAAAGAACTATCCAAGTTGGACCACGGGTATTATTGGAGCTGTCCGATCGTCGCTTATAGCAAACTGTTGCCTACCATACTAGTGCTGTTTCTCACCATACATATCCTACATTCATCAATGCCACGTTTTGCACATCATTGAGAGTACATTGATTGAACATACACTCTTAGATTTGGCCATTAGAGGTTACCCAAATTTATTATTCGGCACCGGTAGTATAAAGTGGTAGAAGAAGGAATTGCCCATCTAAAATGGACATATTCTTGAATTGAAGCATACTGTTGTATGAAAGAGGCATGGTTTAGGTAAGTGGAGGAAACCGATATTGGGATCTTGCCCGCTGGAGATGCTGGCCACGGAATCTTAGATGGGTGGGCTCTTGCATGCTTTGATTCTCTTTGGTGGAAAGGGACAAAGCTGGTTGGTGGAATTTGCTCCGAGAGGGCCACTTGGTGGTTCTCTTTTTAATAAAGGAACAGGGGAACAACACTACGCTTGACCAATTATGCTTAACCAAACACCCACCAACTGAGACATCTAAAATAATCAAAAGAACAGAGCAGAAAAGGAGGGAAGTTTGTTGAGCCAGATAGTTACAGCTAACACTTTGTCCCATGTTTTTTTTTCCCTCTACTACTGTTTAATTTATTCTTAACATGGTAAGGTTTGGTTTTACTGATGCATGTGTTTCTCTGAATAACAGGTGTGAGGAGTTGTTACGATGAGGGCAAGCGCACAGCTGAAACTTTGACCATGGACTATCACCGTGGTGCCAACCTTGAGGTATAATGCAGTCTCTCTCTTTGCAAAATGACTTTACGTTCTGTTCGTTCATCTGAAAGTAAATGTTAATTTCTGCTGTTGGTTTTTTCTGTGTTCAGGTTAGGATCGCTCGTATCTTCAACACATATGGCCCTCGCATGTGCATCGATGATGGCCGTGTTGTCAGCAACTTTGTTGCTCAGGTATAATTCACTCTTTAACTGTCCTAATTTTTTTCAGAAGGATGCAAATCATTGTTCAGTTTAAACTGAATTGGTCTATCTGCAATTATGGTTACAGGCTTTGAGGAAGGAGCCTTTGACGGTTTACGGTGATGGCAAGCAGACCAGGAGTTTCCAATATGTCTCTGATCTGGTGAGTTTTTCTCTCTACTGCACTAAGCATATCTGAAATCTAATAAGCACTTGGGAAGACAGTAATACTAATGACAATGTCAACAGAAATAGTTATGATCTGAGGTTTATCCTCCTACTTGTCTAGTTGTGGAATGTCGCACAGCACTGCATTTCTTGTACTGATTTTGGTCTCCTCCCAGGTTGAGGGATTGATGAGGCTCATGGAAGGTGAGCACGTAGGGCCATTCAACCTGGGTAACCCTGGTGAGTTCACCATGCTGGAGTTGGCCAAGGTTGTCCAGGACACCATCGACCCTAACGCAAAGATCGAGTTCCGTCCCAACACCCAGGACGACCCGCACAAGCGCAAGCCTGACATCGGCCGTGCCAAGGAGCTCCTTGGGTGGGAGCCAAAGATCCCTCTCCACAAGGGTCTTCCCCTCATGGTCACCGACTTCCGCAAGCGCATTTTCGGTGACCAAGACAGCACCGCCACAACCACCGGAGGCCAACAAGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018203

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018203&oldid=46959"