BGIOSGA018209

From RiceWiki
Revision as of 02:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018209| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018209, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018209

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018209, complete gene.

LocusTag

OSJNBA0009L15.8

Ensembl Transcript ID

BGIOSGA018209-TA

Ensembl Protein ID

BGIOSGA018209-PA

Length

1977

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18005136..18007112

Sequence Coding Region

18007107..18007112,18005136..18006668

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18005136..18007112 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18005136..18007112 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGCGGTGTCTAGAGATGAACAAGATTCATTGCCAACATCATCACCTCAACCAGATGTACGAGATTCGCAGCCAGCATTATCACCTCAACCAGATGAACCGAGGCCAGAGAAGCGAAAGCGAGGTGGCCGAGGTCGAAATAAAATGCCCAAGGGTCGATACACCATCACTCATGTCACTGACGATGGTCAGCCTATGTTGCCTAAGACTGCAGTGTCAGCATTCCGGAGAGCATGCAGTGTAATTGGAAGGTCAAAGATCAAAATAACCTACAAGGACTGGAAAAAAGTACCAAACACTGAGAAAACGGTACTATGGGAGACTATGAAAGGAATGTTTGAGATCCCTGAAAGTGCCCATGACAGTGTGCAAAGACAAGCATTGCTTAAGATTGGCAAGGTATGGAAGAACTTCAAGAGTGAGCTTTACAAGAAATACGTGAAGCAAGATCGGACACCCTTCCATGACAAGGAACTCGCACACTTGCGGGATCAATGGAATGAGTTTGTACAGAGATGCCAGACGCCAGAATTTCTGCATCAGAGTGAGGTAAACAAGGCTCTCTCAGCATGCAATACTCATCCTCACAGACTGGGCACTGGTGGCTATGTGGGCAAATCCTTTCAATGGGCAAGGGAGGATGAGGAAGCAGCTCAGCTGAGTCGGCCCACTCCATTTGCAGACATCCCAGTACAGCGGGCTCGGAATTGGGTACGGGCAAGGGCAATCACCACTTCTGATGGCAGCATCTCCTTTGCAAATACCGAGACTGAGCAGGTTGCTCAAAGGGTCCAACAACTTGCCGAAGAATCTCTTCAAGGGTCTTTTCAGTCATGTAGAGAAAAGGACATACTAACTGAGGCCCTAGGAACCAAAGAACACCCAGGTCGCACACGAGGCCTCGGAGCTACAGTTCCATGGAAGGCGGGATTCACTGACAATTCTGATTTGTACAAGAAACACAGGAGAAGCAAAGGCGAGTGTGAAGAAACCAACGTAGCACAGCTCAAAAAGGAGATATATGATGAATTAGCAGCAAAAATAGATAGTGAAGTTGAAGAGAGATTACAGCAGGCCCTTAATCAGAGGTCGGTAGCCTCCCCCGTGGAACCCAGCCCCAACACAATTCAGGACTCGGTAGTCTCCCCCGTCCCCGTCGAACCCAGCCCCAATACGAATCAGGGTAACTGTGGGGCTGTTGCACATTCTCACCCTGGTGGCAGCATTATCCATGATAGGTATCCTGTTGATGACATCGAGGAACATACAAAGTGCAAGATCCAGGTGGCTATCGGTGTAGGCACTAATTTCATCATTGATGCTGGTGAGGGTACTGCATATCCATGCAGTGAAGATCCATGGGTTCAAGGTGTGCCGCTAGCAGAGGGTTATGGAAAGGTGCGAGTGAACATGGTATATCCAAATTTCACTGCATTCCCATTGCCTCTACCCCCAAACGAAGAGATCATGACACTAGGGCAGGCCCTCCGCAAATGTATCCAGTGGCCAAAGAAGGACATCACTTTATCAACCTAA</cdnaseq>

Protein Sequence

<aaseq>MKAVSRDEQDSLPTSSPQPDVRDSQPALSPQPDEPRPEKRKRGGRGRNKMPKGRYTITHVTDDGQPMLPKTAVSAFRRACSVIGRSKIKITYKDWKKVPNTEKTVLWETMKGMFEIPESAHDSVQRQALLKIGKVWKNFKSELYKKYVKQDRTPFHDKELAHLRDQWNEFVQRCQTPEFLHQSEVNKALSACNTHPHRLGTGGYVGKSFQWAREDEEAAQLSRPTPFADIPVQRARNWVRARAITTSDGSISFANTETEQVAQRVQQLAEESLQGSFQSCREKDILTEALGTKEHPGRTRGLGATVPWKAGFTDNSDLYKKHRRSKGECEETNVAQLKKEIYDELAAKIDSEVEERLQQALNQRSVASPVEPSPNTIQDSVVSPVPVEPSPNTNQGNCGAVAHSHPGGSIIHDRYPVDDIEEHTKCKIQVAIGVGTNFIIDAGEGTAYPCSEDPWVQGVPLAEGYGKVRVNMVYPNFTAFPLPLPPNEEIMTLGQALRKCIQWPKKDITLST</aaseq>

Gene Sequence

<dnaseqindica>1..6#445..1977#ATGAAGGTATTACTCTTGTAGAAGCAAACTACATGTAGGCTCTGTTCGTTTGCCAGGGTTGGGAACCCATCCTTCTGGCACAGAAAACAGAGCAGCCTATTAGTGCGTGATTAATTAATTATTTGCTAATTTTTTTTCAAAAATGGATCAATATGATTTTTTAAGCAACTTTCTTATATAAACTTTTTGCAAAAAAACACACCGTTTAGCAATTTGAAAAGCGTGCGTGCGGAAAACGAGGATGGAGAGTTGGGAACCTTGACATACGAACATTGCCGTAGTCATGTAGAGTTTCAGATTTCATAAGAATGGTTTCTTTTCTCAACAACATTAGCAACTAGCTAAAAAGATAATTGCCATATACAGTTGCTTTTATTGTGCACATCGATCTGTTCCTAGCACCAAAATTTGAGTTAATTTGATGTCCCTTTATTTTTGGCAAAGGCGGTGTCTAGAGATGAACAAGATTCATTGCCAACATCATCACCTCAACCAGATGTACGAGATTCGCAGCCAGCATTATCACCTCAACCAGATGAACCGAGGCCAGAGAAGCGAAAGCGAGGTGGCCGAGGTCGAAATAAAATGCCCAAGGGTCGATACACCATCACTCATGTCACTGACGATGGTCAGCCTATGTTGCCTAAGACTGCAGTGTCAGCATTCCGGAGAGCATGCAGTGTAATTGGAAGGTCAAAGATCAAAATAACCTACAAGGACTGGAAAAAAGTACCAAACACTGAGAAAACGGTACTATGGGAGACTATGAAAGGAATGTTTGAGATCCCTGAAAGTGCCCATGACAGTGTGCAAAGACAAGCATTGCTTAAGATTGGCAAGGTATGGAAGAACTTCAAGAGTGAGCTTTACAAGAAATACGTGAAGCAAGATCGGACACCCTTCCATGACAAGGAACTCGCACACTTGCGGGATCAATGGAATGAGTTTGTACAGAGATGCCAGACGCCAGAATTTCTGCATCAGAGTGAGGTAAACAAGGCTCTCTCAGCATGCAATACTCATCCTCACAGACTGGGCACTGGTGGCTATGTGGGCAAATCCTTTCAATGGGCAAGGGAGGATGAGGAAGCAGCTCAGCTGAGTCGGCCCACTCCATTTGCAGACATCCCAGTACAGCGGGCTCGGAATTGGGTACGGGCAAGGGCAATCACCACTTCTGATGGCAGCATCTCCTTTGCAAATACCGAGACTGAGCAGGTTGCTCAAAGGGTCCAACAACTTGCCGAAGAATCTCTTCAAGGGTCTTTTCAGTCATGTAGAGAAAAGGACATACTAACTGAGGCCCTAGGAACCAAAGAACACCCAGGTCGCACACGAGGCCTCGGAGCTACAGTTCCATGGAAGGCGGGATTCACTGACAATTCTGATTTGTACAAGAAACACAGGAGAAGCAAAGGCGAGTGTGAAGAAACCAACGTAGCACAGCTCAAAAAGGAGATATATGATGAATTAGCAGCAAAAATAGATAGTGAAGTTGAAGAGAGATTACAGCAGGCCCTTAATCAGAGGTCGGTAGCCTCCCCCGTGGAACCCAGCCCCAACACAATTCAGGACTCGGTAGTCTCCCCCGTCCCCGTCGAACCCAGCCCCAATACGAATCAGGGTAACTGTGGGGCTGTTGCACATTCTCACCCTGGTGGCAGCATTATCCATGATAGGTATCCTGTTGATGACATCGAGGAACATACAAAGTGCAAGATCCAGGTGGCTATCGGTGTAGGCACTAATTTCATCATTGATGCTGGTGAGGGTACTGCATATCCATGCAGTGAAGATCCATGGGTTCAAGGTGTGCCGCTAGCAGAGGGTTATGGAAAGGTGCGAGTGAACATGGTATATCCAAATTTCACTGCATTCCCATTGCCTCTACCCCCAAACGAAGAGATCATGACACTAGGGCAGGCCCTCCGCAAATGTATCCAGTGGCCAAAGAAGGACATCACTTTATCAACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018209