BGIOSGA018227

From RiceWiki
Revision as of 02:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018227| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018227, complete gene.| tag = OS05G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018227

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018227, complete gene.

LocusTag

OS05G0353500

Ensembl Transcript ID

BGIOSGA018227-TA

Ensembl Protein ID

BGIOSGA018227-PA

Length

2687

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17534418..17537104

Sequence Coding Region

17536999..17537104,17536840..17536858,17535603..17536362,17535094..17535226,17534418..17534995

Genome Context

<gbrowseImage1> name=IndicaChromosome05:17534418..17537104 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:17534418..17537104 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGATGAGCAGGGTGGCGGTGGCTGTGCTGCTGCTGCTCTGCTTGCAGCTTCAGCTTGGGATCAGCGGCGGCGGCGGCGGCGGCCATGGTGCTCGGCGAGGCGTGCGCCCTGCAGCTCGGTTGATCCATGCCAAGAAGTCATCATCATCTTCGCAGCAGCAGCAGCAGCGGAGCAGGCACGCCGGCAGCAAGGCCGGATGGCCGTCGACGTCGTCGACGCCGTCGAACCCGTTCGGACTCCCGATGCTGCTGCCGCCGCCGCCGCCGCTCAAGGACTGGCCGCCATGGCTCGACATGCCGCCGGTCCAGGGCCCGTCGAGCTCGCCCTCGCCTTCGCCTTCCCCTGCGCCTTCGCCAGCGTCGTCGGCCGCGGTCGCCGAGCACGCGGCCCCGCCGCGGCGCGGCGAGGAACACGCGCGCCCCCGCAGCATCGCGTTGCCGCCGGCGTCTAGCTCCGGCGACGCCGGCGAAACCAGCCGGCCGGAGGTGACGGACGGGAGCGCAACGAGGCGCGGCGGCGGCGGCGGCAAGACGAACTACGTTCTTGTGGCGGCGGCGGGGGCGTCGGTGCTTCTTGCGGCGTCGGCGGCGGCGTTCGCGGCGTGCTACCGGTCGAGCAAGGTGGTGAGGAGCGTGCGGCCGTGGGCGACGGGGCTGAGCGGGCAGCTGCAGAGGGCGTTCGTGACGGGGGTGCCGGCGTTGAGGAGGGCGGAGCTGGAGGCGGCGTGCGAGGACTTCAGCAACGTCATCGGCTCGCTGCCGGAGTACACCATGTACAAGGGGACGCTCTCCAGCGGCGTCGAGATCGCCGTCGTCTCCACCACCAAGACGTCGCCCAAGGACTGGTCCAAGAAGTGCGAGGCACACTTCAGAAAGAAGATAACGAGCCTGTCGAGGGTGAACCACAAGAACTTTGTGAACCTTCTTGGCTACTGCGAGGAGGAGCAGCCGTTCACGAGGATGATGGTGTTCGAGTACGCCCCAAACGGCACACTATTCGAGCATCTCCACGCGAGGGACGAGGGGCACCTGGACTGGCCGACGCGGCTGCGCGTGGCGGTCGGCGTCGCCTACTGCCTGGAGCACATGCACCAGCTCGCCCCGCCGGAGATCGTCCGGACGCTGGACGCCTCCACCGTCTACCTCACCGACGACTTCGCCGCCAAGATCTCCGACGTGGGCTTCTGCGAGGAGGAGATGGCGGCGGCGGCGGCGGCGCCGGCGATGGCGGACAGGGAGAGCGTGGTGCACGGGTACGGGATGCTGCTGCTGGAGATGATGGCGGGGCGGCTCGCGGCGTCGGAGGGCGGGCTGGTGCAGGGGTGGGCGGCGGCGCTCCTCCGCGGGGAGCGGCGGCTGCGGGACGTCATGGACCCGGCGCTGCGGGGCGCCTTCCACGCCGAGACCGTCGACCGCCTGGACGCCGTCGTCCGGTCCTGCGCCGACCGCGACCCGAGGCGGCGCCCCTCCATGGCCGACGTCGCGGCCCGGCTCAGGGAGATCACCGCCATGCCGCCCGACGCCGCCACCCCCAAGGTGTCGCCGCTCTGGTGGGCCGAGCTCGAGATCATCTCCACCGAGGCAGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MERMSRVAVAVLLLLCLQLQLGISGGGGGGHGARRGVRPAARLIHAKKSSSSSQQQQQRSRHAGSKAGWPSTSSTPSNPFGLPMLLPPPPPLKDWPPWLDMPPVQGPSSSPSPSPSPAPSPASSAAVAEHAAPPRRGEEHARPRSIALPPASSSGDAGETSRPEVTDGSATRRGGGGGKTNYVLVAAAGASVLLAASAAAFAACYRSSKVVRSVRPWATGLSGQLQRAFVTGVPALRRAELEAACEDFSNVIGSLPEYTMYKGTLSSGVEIAVVSTTKTSPKDWSKKCEAHFRKKITSLSRVNHKNFVNLLGYCEEEQPFTRMMVFEYAPNGTLFEHLHARDEGHLDWPTRLRVAVGVAYCLEHMHQLAPPEIVRTLDASTVYLTDDFAAKISDVGFCEEEMAAAAAAPAMADRESVVHGYGMLLLEMMAGRLAASEGGLVQGWAAALLRGERRLRDVMDPALRGAFHAETVDRLDAVVRSCADRDPRRRPSMADVAARLREITAMPPDAATPKVSPLWWAELEIISTEAA</aaseq>

Gene Sequence

<dnaseqindica>1..106#247..265#743..1502#1879..2011#2110..2687#ATGGAGAGGATGAGCAGGGTGGCGGTGGCTGTGCTGCTGCTGCTCTGCTTGCAGCTTCAGCTTGGGATCAGCGGCGGCGGCGGCGGCGGCCATGGTGCTCGGCGAGGTGTGTGTTGTATTTTTGTTTTTGTTTGTTCAGATGATCAGCTTGTCCAAGAATGTTCTGGTTTCTGTTTAGCTGATTTGTGTATGTTTTGAAATCATTGTTATGATGTGGTGTTGATGGAACGGCGAATTGGAATGAAGGCGTGCGCCCTGCAGCTCGGTGAGAACGATTGATGTTTTCTTGGCTCACTTTCATGTTCGTACATGCCCTGAATTTCAGTCTAAATTTTGACAAAATTCAGAGACTCTTAATTTATAGGCAGTAGTAATAAAGTTTATTTTCAAAAAACCGCAATAATAGAGTTTCCTTTAAGGAAATAATAATTCACAGTGTTATAATTAGGTTGCAGCTTGGGCATAATTTCTTCTTCTCTTCCATCACAAGTTTCCCCTGCATTTGAACAAGCATAGGCCAAATTTGCCTGAATTATCCGTGAATGTTCATCACAAAGACATTTTTCCATAGAAATCAAAATAGATATAGAATGGTAGGAAAAAAATTTGTGCTAGGAATGTTGTCGTGGCTGTCAGAGATGGACAGCTGAACAACCAACCATTCGACCCCATCCGGGCTGCACGCATGTTCTTGTCCAATTGCTCGTCAACTTTAGCCTCATCTCTGCTCAATCATTCGCAGGTTGATCCATGCCAAGAAGTCATCATCATCTTCGCAGCAGCAGCAGCAGCGGAGCAGGCACGCCGGCAGCAAGGCCGGATGGCCGTCGACGTCGTCGACGCCGTCGAACCCGTTCGGACTCCCGATGCTGCTGCCGCCGCCGCCGCCGCTCAAGGACTGGCCGCCATGGCTCGACATGCCGCCGGTCCAGGGCCCGTCGAGCTCGCCCTCGCCTTCGCCTTCCCCTGCGCCTTCGCCAGCGTCGTCGGCCGCGGTCGCCGAGCACGCGGCCCCGCCGCGGCGCGGCGAGGAACACGCGCGCCCCCGCAGCATCGCGTTGCCGCCGGCGTCTAGCTCCGGCGACGCCGGCGAAACCAGCCGGCCGGAGGTGACGGACGGGAGCGCAACGAGGCGCGGCGGCGGCGGCGGCAAGACGAACTACGTTCTTGTGGCGGCGGCGGGGGCGTCGGTGCTTCTTGCGGCGTCGGCGGCGGCGTTCGCGGCGTGCTACCGGTCGAGCAAGGTGGTGAGGAGCGTGCGGCCGTGGGCGACGGGGCTGAGCGGGCAGCTGCAGAGGGCGTTCGTGACGGGGGTGCCGGCGTTGAGGAGGGCGGAGCTGGAGGCGGCGTGCGAGGACTTCAGCAACGTCATCGGCTCGCTGCCGGAGTACACCATGTACAAGGGGACGCTCTCCAGCGGCGTCGAGATCGCCGTCGTCTCCACCACCAAGACGTCGCCCAAGGACTGGTCCAAGAAGTGCGAGGCACACTTCAGAAAGAAGGTATTACTACTGCCTCCCTTTGTAAATATTACTATTATTATTGTTTATTTTATTGTGAATTGGTTTATCATTAAATGTAATTTAAATATTTGCAAAGAAAAGCTAAATAAGGACAATGGTCAATGACGTTATGTATTAAAAACCAGAGTAAATAATTGTCAATTAGAGTACATGCACAAATCATATCTAGAATCTTTAGTGTGTGTAAGATACGTTCCCTTGATATTATTTTAATTTTGACTACCAATAATGCAATACTTGATTATTTTTTTCCCTAGGTCCCTATGAAATTGAACTGATTCACTGATTCCTGTGAAAAAGTTTACGAGATAACGGTGCCTAACATTGTGTCATTTGTGTTGGGGGGTTGTTCCAGATAACGAGCCTGTCGAGGGTGAACCACAAGAACTTTGTGAACCTTCTTGGCTACTGCGAGGAGGAGCAGCCGTTCACGAGGATGATGGTGTTCGAGTACGCCCCAAACGGCACACTATTCGAGCATCTCCACGGTAATTTTCTTTGGAACTTAGGATTTCTACCTACTTCGACACCCCGACCTGTAGCAAGCACGAAAAATGGCAGCTGACATTGACGGTGGGAAATGCAGCGAGGGACGAGGGGCACCTGGACTGGCCGACGCGGCTGCGCGTGGCGGTCGGCGTCGCCTACTGCCTGGAGCACATGCACCAGCTCGCCCCGCCGGAGATCGTCCGGACGCTGGACGCCTCCACCGTCTACCTCACCGACGACTTCGCCGCCAAGATCTCCGACGTGGGCTTCTGCGAGGAGGAGATGGCGGCGGCGGCGGCGGCGCCGGCGATGGCGGACAGGGAGAGCGTGGTGCACGGGTACGGGATGCTGCTGCTGGAGATGATGGCGGGGCGGCTCGCGGCGTCGGAGGGCGGGCTGGTGCAGGGGTGGGCGGCGGCGCTCCTCCGCGGGGAGCGGCGGCTGCGGGACGTCATGGACCCGGCGCTGCGGGGCGCCTTCCACGCCGAGACCGTCGACCGCCTGGACGCCGTCGTCCGGTCCTGCGCCGACCGCGACCCGAGGCGGCGCCCCTCCATGGCCGACGTCGCGGCCCGGCTCAGGGAGATCACCGCCATGCCGCCCGACGCCGCCACCCCCAAGGTGTCGCCGCTCTGGTGGGCCGAGCTCGAGATCATCTCCACCGAGGCAGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018227