BGIOSGA018253

From RiceWiki
Revision as of 02:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018253| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018253, complete gene.| tag = OsI_195...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018253

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018253, complete gene.

LocusTag

OsI_19546

Ensembl Transcript ID

BGIOSGA018253-TA

Ensembl Protein ID

BGIOSGA018253-PA

Length

2875

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16997738..17000612

Sequence Coding Region

17000539..17000612,16999660..16999712,16999465..16999549,16997738..16998788

Genome Context

<gbrowseImage1> name=IndicaChromosome05:16997738..17000612 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:16997738..17000612 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGGTGGATCAGAGGACGACGGCGAAGGCGATCATGCCGCCGGTGGAGATGCCGCCCGTCCAGCCCGGAAGAAAATGTGGAGGCGAGGAAAGTACTGGAAACCTTGATTCCGTCCAACCGATAGCAGGAGCTCTTCCCTGTAATGAGCATGCACTCTTGGCCCAGCAGACCCCCAAGGGAGATGCGCCATCAGTGGGCTCTAAGATTTGGAAAAAGCGACCACGGAGATCACGCGATGGACCTACTTCAGTTGCAGAGACCATCAAGCGGTGGGCCGAGCTCAACAATCAGCAGGAGCTTGATCCACAGGGTCCAAAGAAGGCAAGGAAGGCACCTGCAAAGGGTTCAAAGAAGGGCTGCATGAAGGGGAAAGGAGGACCAGAGAATACACGTTGTGACTTCCGTGGTGTGAGGCAACGTACCTGGGGCAAGTGGGTTGCTGAAATTCGGGAGCCGAATCGGCAAAGTAGACTCTGGTTGGGGACCTTCCCAACTGCCGAAGCTGCAGCTTGTGCTTATGACGAGGCAGCCAGAGCAATGTATGGTCCAATGGCTCGCACTAATTTTGGCCAGCATCATGCCCCTGCTGCTTCCGTTCAGGTGGTTGCACAAGCAGCTGTCAAATGTGCTTTACCTGGTGGTGGCTTAACAGCAAGCAAGTCTAGAACATCCACTCAGGGTGCATCAGCAGATGTTCAAGATGTTTTAACTGGTGGCTTATCAGCATGCGAGTCCACTACAACAACAATTAATAATCAATCTGATGTCGTCTCTACCTTACATAAGCCAGAAGAGGTTTCTGAGATCTCTAGTCCACTGAGAGCTCCACCAGCTGTCCTGGAAGATGGTTCTAATGAAGACAAGGCTGAATCGGTTACCTATGATGAGAACATTGTCAGCCAGCAGCGTGCCCCTCCTGAAGCCGAGGCTAGTAATGGAAGAGGCGAGGAGGTCTTTGAGCCTCTGGAACCTATTGCCAGCCTACCAGAGGACCAAGGAGATTATTGTTTTGATATTGATGAGATGCTGAGAATGATGGAAGCTGACCCTACGAACGAGGGTTTGTGGAAAGGCGACAAAGATGGATCAGACGCCATCCTGGAGCTTGGCCAGGATGAACCTTTCTACTACGAAGGGGTTGATCCAGGCATGCTGGACAACTTGCTCAGGTCTGATGAGCCAGCATGGTTATCGGCAGATCCTGCGATGTTCATCTCCGGTGGCTTCGAAGATGACTCTCAGTTCTTTGAGGGCTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MTVDQRTTAKAIMPPVEMPPVQPGRKCGGEESTGNLDSVQPIAGALPCNEHALLAQQTPKGDAPSVGSKIWKKRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARKAPAKGSKKGCMKGKGGPENTRCDFRGVRQRTWGKWVAEIREPNRQSRLWLGTFPTAEAAACAYDEAARAMYGPMARTNFGQHHAPAASVQVVAQAAVKCALPGGGLTASKSRTSTQGASADVQDVLTGGLSACESTTTTINNQSDVVSTLHKPEEVSEISSPLRAPPAVLEDGSNEDKAESVTYDENIVSQQRAPPEAEASNGRGEEVFEPLEPIASLPEDQGDYCFDIDEMLRMMEADPTNEGLWKGDKDGSDAILELGQDEPFYYEGVDPGMLDNLLRSDEPAWLSADPAMFISGGFEDDSQFFEGL</aaseq>

Gene Sequence

<dnaseqindica>1..74#901..953#1064..1148#1825..2875#ATGACGGTGGATCAGAGGACGACGGCGAAGGCGATCATGCCGCCGGTGGAGATGCCGCCCGTCCAGCCCGGAAGGTGAGATCTTGCTCTCCAACATCCCTTCACTTTCCCCTCTCTCTTGTGGTTACTTTTAGGGGGTGGGGTGGTTCGAGTTTGGGCGGGAGTTAGGGGTTGGGGGTTCGCTCGATTCGTTGGTGGATCGAGCGATTTTGGGTGTATGGGTTGTGGATTTTAGGTTGGATTGGTTGTATTTGGTCGGGGTTGGGTGCTAGGGTTGGTGGAATTTGGGGGGCTAGGGTTTCAGGATCTGGTTATTTTGCCTGAATATGAATTGGGGGTGAAGGGTGCAGGGTTGGATTGTGGGGGGTGACCGTGCGGTGTAGGGATCATGGAAGATGTTGGGGATTTTGTTGGGTTGAAAGCTGGGACAGGGTGGGCGATTGGGGGAGGTGGGATCTCTGGATCCCCTTTTAATTGGGCGGCAGTGCTTTGCTGGAGTCCAAATCAATCGTTGTGAATTCCATAGCTAATGTTTGTAGTTGTATATATTATAGGTAAATTGAGTGTTTTGGGTTCGAACCCCTTTGCAAGTTTCGGTTTTTTCCCCTACTGTGGGTGACTTTGGTAGTAGTATTGTTTCAATGGTGTGATTACCTGTTGATTTTGTGAGAGACTGTTCGAATTACTTGTTGTTTAGAGTCTTGAGTAGCAAAGTTATACTACTATGGTTCTAGTCAGCACCATCTCCACAGAAACGTGTCGTATGCCCCGAGTCATCTAACTTAATGTCATTCTTTGTTGCTGTACACTGTTGTTATATTTTTGTAATTTTTGTCAGTTTAACTTCGTAATACAGTCTCTGATACATGTATGTCTATTTGTCTTGTCTTTTGGTAACTAGAAAATGTGGAGGCGAGGAAAGTACTGGAAACCTTGATTCCGTCCAACCGATAGGTATGACTGCTTTGATTTGAACACCTTTCGTAAACAGGAAGTACAGATTGAGATGGGTCCCTTGTGTCCAGCAGTGAAGTGTGAGCACAAAATAACTGCTTGTGTTTCAGCAGGAGCTCTTCCCTGTAATGAGCATGCACTCTTGGCCCAGCAGACCCCCAAGGGAGATGCGCCATCAGTGGGCTCTAAGATTTGGTGTGTTTAACCGTTCTGATATGTCTGGCTTGCTCAATTTGTTGGAGCATGCGGGCTATGACTACCAGGCTTAACTGGTTTTTTAGTATAGAGCTGCACGATAGTATTTTTTTTCCTTGTCTTTTCACCAGCTGGTTTCTGATCAGCTGGTTTAAGCATATTCGGTTTCTCTCTTGATTTGATCCTGTTCAGCTGTTACATTGTGTGAAATGGAAGAAACAATAACTGAGTAGGTCCAGTGAATAAAATAAGCATCAGTGCTTTTGAGATGTTACGAGTATTTTTCTAAACAATTAGCTCGAGCTTGATTGATTGAGTGAAATAGTACATCTATGTGCGTGTTGCTTGTATGAACTTAAGGAATTGTTCGCAGAATTCATTGAAATGAATAACTGGCAAATTAGAGTTTAGTTATCAAGCGTGATTATCATCATAATAGTACCTGTTTCTGTGGATATGGTCTGTTTGTAGGAACATAGGAAAGCATATGTGTTTGTGGTGAACAGTTGATGGCACTGGGGTTATTGAACGCGTTTAGTTCATGTTTCTGTGGAGATGGTCTACCTTGTGGGAAACATTCATTGTTCTGTTCTGCTATGTCCTTTTCCCTTGGTTATGTGGATATTTTCCCTGAATCTGTAGAACAATTACTAAAGTTAAGCTCCTTGTTTAGCAGGAAAAAGCGACCACGGAGATCACGCGATGGACCTACTTCAGTTGCAGAGACCATCAAGCGGTGGGCCGAGCTCAACAATCAGCAGGAGCTTGATCCACAGGGTCCAAAGAAGGCAAGGAAGGCACCTGCAAAGGGTTCAAAGAAGGGCTGCATGAAGGGGAAAGGAGGACCAGAGAATACACGTTGTGACTTCCGTGGTGTGAGGCAACGTACCTGGGGCAAGTGGGTTGCTGAAATTCGGGAGCCGAATCGGCAAAGTAGACTCTGGTTGGGGACCTTCCCAACTGCCGAAGCTGCAGCTTGTGCTTATGACGAGGCAGCCAGAGCAATGTATGGTCCAATGGCTCGCACTAATTTTGGCCAGCATCATGCCCCTGCTGCTTCCGTTCAGGTGGTTGCACAAGCAGCTGTCAAATGTGCTTTACCTGGTGGTGGCTTAACAGCAAGCAAGTCTAGAACATCCACTCAGGGTGCATCAGCAGATGTTCAAGATGTTTTAACTGGTGGCTTATCAGCATGCGAGTCCACTACAACAACAATTAATAATCAATCTGATGTCGTCTCTACCTTACATAAGCCAGAAGAGGTTTCTGAGATCTCTAGTCCACTGAGAGCTCCACCAGCTGTCCTGGAAGATGGTTCTAATGAAGACAAGGCTGAATCGGTTACCTATGATGAGAACATTGTCAGCCAGCAGCGTGCCCCTCCTGAAGCCGAGGCTAGTAATGGAAGAGGCGAGGAGGTCTTTGAGCCTCTGGAACCTATTGCCAGCCTACCAGAGGACCAAGGAGATTATTGTTTTGATATTGATGAGATGCTGAGAATGATGGAAGCTGACCCTACGAACGAGGGTTTGTGGAAAGGCGACAAAGATGGATCAGACGCCATCCTGGAGCTTGGCCAGGATGAACCTTTCTACTACGAAGGGGTTGATCCAGGCATGCTGGACAACTTGCTCAGGTCTGATGAGCCAGCATGGTTATCGGCAGATCCTGCGATGTTCATCTCCGGTGGCTTCGAAGATGACTCTCAGTTCTTTGAGGGCTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018253