Os11g0660500

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0660500| Description = Similar to Translationally controlled tumor protein (Fragment)| Version = NM_001074937.1 GI:115486522 GeneID:4351061|...")
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Gene Name

Os11g0660500

Description

Similar to Translationally controlled tumor protein (Fragment)

Version

NM_001074937.1 GI:115486522 GeneID:4351061

Length

2256 bp

Definition

Oryza sativa Japonica Group Os11g0660500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28353580..28355835

Sequence Coding Region

28353931..28354048,28354239..28354396,28354484..28354612,28355303..28355376,28355696..28355723

Expression

GEO Profiles:Os11g0660500

Genome Context

<gbrowseImage1> name=NC_008404:28353580..28355835 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28353580..28355835 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttggtctaccaggatctgcttaccggtgacgagctcctgtcggattcgttcccctacagagagatcgagaacggcatcctctgggaagtcgatggcaagtgggtcgttcaaggagctattgatgtggacattggtgccaacccatctgctgagggtggtggtgatgatgagggtgttgatgaccaagctgtgaaggtggtcgacattgtggacaccttccgtcttcaggagcaacctccttttgacaagaagcagtttgtgaccttcatgaagcgctacatcaagaacctctccgccaagctggatgcggaaaagcaagaggaattcaagaagaacattgagggtgccaccaagtacttgcttggaaagctcaaggaccttcagttctttgttggtgagagcatgcatgatgatggcggcttggtgtttgcctactacaaggacggagccaccgacccaaccttcctttacttctctcatgggctgaaggaggtcaagtgctga</cdnaseq>

Protein Sequence

<aaseq>MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVD IGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKL DAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFS HGLKEVKC</aaseq>

Gene Sequence

<dnaseqindica>1788..1905#1440..1597#1224..1352#460..533#113..140#ctctctctccgtccgtccgcgccgctactcccccctcgccgagagagctctagggtttccgctgccgaattttttttttaattcggggggagagatttgaagaggcggcaccatgttggtctaccaggatctgcttaccggtgcgtgaattgatcataattttctctggtttttttcgggggtaattttgttgtttttggagtcggggatgtggggattttgggaattggaggtggcgcggttagatctgggcgttttccgtgtttgaatcggatgatctaaccgagaattattactggtaggaggttgtggtttctgattgtttttttttttatcgaatcgtcagatctgcttgtgtgtggggatcgagtttgaactcgtgggggattatgtgttgtgtgtttgctgatgcgattggtttgactgaaatctgatttgtttgatttggatgtgttgcaggtgacgagctcctgtcggattcgttcccctacagagagatcgagaacggcatcctctgggaagtcgatggcaaggtatgtcgctttctgtttagtaggcggattcaccagctgtatgcttttgctagcttttgattgatctgttgccgtcctcgattagattcagtgtaacatggttatgtgaaattcgatcattccgtttggtgaacacttcgatctttagtggatatgtcattgcatgttaaattattcactgcttgcttggcacaacatatttgtgcagagttagcttaattatgagccttttgggcatttcgtaaaaaaagatgaagtgcttgtctatgcttctgaggctttaaatatcatgcatactcgtggatgctgtgctacgtggcttttgaccttattaattgttgcaatgcatgaggattagaaagatttgcgttgaggattctaggttgattgatatttccaatgtatcgatttatttagttgtatcaatgaaacatgtttttcaaatcagagatcattataatatgttcctaaccagtgaaacaatcttgctttcgttttgagtattaatttgatgtttgctttcctttcaaatttcaataccaatggatgttttgatcaactgcatatatgaattattgcaacagaatgcagctgtggatatcttttgagataaccacgattttgtctattaccttgtgaagatgtcatttgattctgtttggttacttatattatgttgtatccttgcagtgggtcgttcaaggagctattgatgtggacattggtgccaacccatctgctgagggtggtggtgatgatgagggtgttgatgaccaagctgtgaaggtggtcgacattgtggacaccttccgtcttcaggttgctctcacttccattaccttggctcttgtatatgatactatctgcactttatttttgtgcttaaattccatgtgtgtttggcaggagcaacctccttttgacaagaagcagtttgtgaccttcatgaagcgctacatcaagaacctctccgccaagctggatgcggaaaagcaagaggaattcaagaagaacattgagggtgccaccaagtacttgcttggaaagctcaaggaccttcagttgtaagttcactaattgcttgccacaggtccaggaaatagtaacatatgtgatgccatgaacatgtctcaccattagtgcctacaaattccagtttaaatgatttgctatgttctatcacattaaattcttgaagcaataagacttgtattcaaacctgcttcttatgctgtctcttatgatctgtttcagctttgttggtgagagcatgcatgatgatggcggcttggtgtttgcctactacaaggacggagccaccgacccaaccttcctttacttctctcatgggctgaaggaggtcaagtgctgagcggttccttctgctcgacactgatgttttatctatgcagtccgccgtatttttggtctagtctatggttgtcagttgactcgatatggtctaatgttggtgtcggaaacaactatcgtttgcttgttatggatgttgagatgagtccttttaaaaaaacctccggattattggattcatgagctccttaaatgtttggaacgatattaatttgctttgtgatggctggagaaagataatgatgaaattgttgtgctagctatgttgcttacacttaaaacatacctttggtgtgttctgtcagactgatgcccaaaaaaaaaaaaacctttagaagcaacctttgtattg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0660500, RefSeq:Os11g0660500