BGIOSGA018268

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Revision as of 02:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018268| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018268, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018268

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018268, complete gene.

LocusTag

OSJNBA0053E01.13

Ensembl Transcript ID

BGIOSGA018268-TA

Ensembl Protein ID

BGIOSGA018268-PA

Length

6208

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16472676..16478883

Sequence Coding Region

16478777..16478883,16477346..16477424,16477159..16477257,16476255..16476368,16475218..16475387
,16475053..16475134,16474757..16474842,16473558..16473815,16472676..16473474

Genome Context

<gbrowseImage1> name=IndicaChromosome05:16472676..16478883 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:16472676..16478883 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGTGCGGGTAGACAAGGCCACGAGCGAGCTGCTGCTCGGCCCCGACTGGACCCTCAACATCGACATCTGCGACGCCGTCAACTCCGATCACGGGCAAGCAAAAGAGGTGATTAAAGCTTTGAAGAAGCGTCTCCAGCACAAAAATTCAAAGGTTCAGTTTTTTGCTTTGACGCTATTGGAAACTCTAATGAAGAATTGTGGGGATCATGTGCATTCACAAGTTGTAGAGCGTGATATACTGCAGGAGATGATCAAAATTGTTAAGAAGAAGACTGATATGCAGTTGAGGGACAAAATTCTAGTACTCCTTGAATCTTGGCAAGAAGCATTTGGTGGGAATGGTGGGAAGCATCCCCAGTACTACTGGGCATATGCTGAAATGAAGAAATTGGGCTTGGAATTTCCTCGGCGATCACCTGATGCTGCACCAATACTTACTCCTCCAATCACACGCCCAACATCTTTGGAATCTTATCATCAACCAAGTTACGGAATGCCAGTTAATTCTTCCTCTAGATTTGATGAGGCAATGCCATCTAACGGGCCTTCCCTGAGTTCATCGGAGATGGAACGCATGTTAGGTGCTGTTGAAGTATTAAGCGAGATGCTGAAAGCAGTGAATCCACATGATCGTGGGGCTGTCAACGATGAAATTATCACAGAGCTTGTGAAACAATGCCGGTCAGACCAGAAAAAGATAATAAGTTTGGTAACTTCATTAAGAGATGAGGAGCTCTTGGGCCAAGCTCTTGACTTGAATGATAGGATGCAGATTCTGCTTGGCAAACATGATGCAATTGCATCAGGTTCTCCTCTACCAGATGAAGAAACAGATATCATGAATGAATCATCAGCAGAAACAACTTCAACTCCAGTGGCAACAGGGGCTCCTCGAGCTGCAGTTGCTGCTATAGTACCAACTAATGTTTTCGATGAAGAGGAGGAAGATGAAGATGACGAGTTCTCTCAGCTCGCTCGCAGGAATTCGAAATTCAGGTCTACAAATGCTGAGAGCACCCCTTCTGGCGTAGCAACATCTTTGTCGACCGCCCATGACGATGAGATAACAAGTTCAGGATCCTCTGGTACCTCTACAGTTTCACCACCTGTTCAAAGCCATGCATTGGCACTGCCTGATCCTCCAGCTCCTGTTAGAACTGCAGAAGAGCAAGTTATGAGTGACCTTCTTGCACTCACCATATCAAACCCTTCACCACCTCAAACTCCACCAACACCTGAAGCTACCACCACCATGAACCAAGGTGGCTCGCAAGCCAATGATCATCCACAACCTAGTTACTCAAACCAAGGACTTGCTGCTGCATCATACAACAGCTATGCTGCTCCTTGGGCTCAGCCTCAATGTCAAACTCCAGGCATTCAGCTTCAGCAGCATCAACAACCATCCCAGTCACAATTGCCCTACAACTCATCTCCCTACCCGCCACCGCCATGGGCATCGGAGGACACCGCCGAGTCCAACCCTTTCATTGCAGCTTCACTGAAGAACCAACCTAATTCCGCCTCGCCGGTTAATGTACCACTGAATTTGAGGCCTCTACAGCAATCAAATTCTTTCGGGGTTCCGCTTCGAAGTGCCGGGCCACAATCGCCGATAAACGGGAGCACTAAGCAACCGATGTCTGCAGGAGCTCGCAGGCCATCTTATGTTTCTTCTAACAAATACTTCGATGATCTGTTTGAGAAAAATGCTGATGGCAGCCTGATGAAGGTGGGCGGTAGCGTTGGTGGGGGCGCATCCTCGCCATACAAGACATAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAVRVDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKALKKRLQHKNSKVQFFALTLLETLMKNCGDHVHSQVVERDILQEMIKIVKKKTDMQLRDKILVLLESWQEAFGGNGGKHPQYYWAYAEMKKLGLEFPRRSPDAAPILTPPITRPTSLESYHQPSYGMPVNSSSRFDEAMPSNGPSLSSSEMERMLGAVEVLSEMLKAVNPHDRGAVNDEIITELVKQCRSDQKKIISLVTSLRDEELLGQALDLNDRMQILLGKHDAIASGSPLPDEETDIMNESSAETTSTPVATGAPRAAVAAIVPTNVFDEEEEDEDDEFSQLARRNSKFRSTNAESTPSGVATSLSTAHDDEITSSGSSGTSTVSPPVQSHALALPDPPAPVRTAEEQVMSDLLALTISNPSPPQTPPTPEATTTMNQGGSQANDHPQPSYSNQGLAAASYNSYAAPWAQPQCQTPGIQLQQHQQPSQSQLPYNSSPYPPPPWASEDTAESNPFIAASLKNQPNSASPVNVPLNLRPLQQSNSFGVPLRSAGPQSPINGSTKQPMSAGARRPSYVSSNKYFDDLFEKNADGSLMKVGGSVGGGASSPYKT</aaseq>

Gene Sequence

<dnaseqindica>1..107#1460..1538#1627..1725#2516..2629#3497..3666#3750..3831#4042..4127#5069..5326#5410..6208#ATGGCGGCGGCGGCGGTGCGGGTAGACAAGGCCACGAGCGAGCTGCTGCTCGGCCCCGACTGGACCCTCAACATCGACATCTGCGACGCCGTCAACTCCGATCACGGGTGTGTCACTCCCCCCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCGATGATTTAGTTTTGAATTCTTGGTTCTCGTGCAACCCAAAATTATGGTGTGTAAATAATGGGAATGGAATCCTCTGCTTATTTGGATTTTGATCACGATGGATGGATAATTCAAGGAATAAGATAAGTGGGTTTATCTCTCTCTAATTACGATCGATATGCGTATTAGTGTTATTTTTTCTAAGGGCGTGGGTTGATGGGGCTTAAAGAATCGGTTCTTGGGTATGTGAAAAAACCAACGTTACCATCATCATCATCTGAAAATGTCTCGTGAGAAACGGGCGAAAGCAAATGATCAGAAGGGTGCCTTTTGCTCCACTCGTCGTCAAATCGCCAGAATTTTAGGATCTGATCGGTTACTCCTACTCTCATGATCAGTACTATTCAGTAGCACATCATCAGTATGTTCGTTTTTCTTCGTTTTTTCTTCTTTCTTTTTTGACTTTTGCTGTTGTGGAAAAGTTGCCCCTTGCTTGATCATGGCAAATACTGGATAGTACAGGCGGCGTGAACGATCATTTTGTCAACAGAAAACTTGAACTTCAAATATCGGTTCAACTAGCCCTTCTTTAATAGAACCCACAAATATAAAATCTGAGTCTTCCTTCTTTATACCTTTTCGGTCTAGTTCATTTTTGTGGATGGTTTCCTGTTACCAGTTCTCAATTTTTTTTTAAAAAAAATGCATATGCAACAGGTAAACAAGTTGAGAACATACATGGCTTTTCCCCCTTTCAAGAATGATGCTCATACTTCAATGCAGCACCTGTTGTTTAGACTGAACCAGGTGTCAATCTAGACCCAACATAGGCACAGATGGACCATCTTGATCTAAATTACCTTCATCCTTTTGACATTATTCTTTTCCTTAAATATTAGAGAGACAGACAGGACCACTGAACCATGATACATGATAATGATATCTCTGGTTCCATGTCACGGCTAGCCAGCGAAGCTTAAGCGGTTGAGGATGCAGGGGAATCTGATTTCTGATATACAAATATGATACATGTGTGGAATAACTTGTGCGACTGACTTGACCAAACATTGCGTTGCTAATTCGTCATCAACAATAAGTTCCAAATTGTCAGGATTCAAAACTTCACCACTATAGTAGCTGAACCAATGTTGAGAAGTTCGGCTTATAATCTCAGTAGGAAACTCCAATAGGAATAGCTAATTGGCTATAGCTGTTCATGTTTGAATCCTTCTTTGGAGGCTTCACAATTGAAAGTACAAACAATACAAAATATCGTATATCAATGATATACTACAAGAGTAAATGGCTGAGTTTAAAATAATGCAGGCAAGCAAAAGAGGTGATTAAAGCTTTGAAGAAGCGTCTCCAGCACAAAAATTCAAAGGTTCAGTTTTTTGCTTTGACGGTATGCTTCCCTGCTTAAATAACCTTTATGTTCTCGAACGTCCTCTGTTATTTGTCTCTGTGAGAACACCATGCAATTGCTTTTGCAGCTATTGGAAACTCTAATGAAGAATTGTGGGGATCATGTGCATTCACAAGTTGTAGAGCGTGATATACTGCAGGAGATGATCAAAATTGTTAAGAAGAAGGTAACATTTTTTCCCTATGGCAATTTTGGGGTCATTTATCTACGCACCACTGTAATAAAATGCCACTTGATCTTTCACTGCCATGTGTTCCTACGGCCTTATACTAGTTTGTTGGGAATTTTCTGAATCAAGACATTCTTGGTGGTATCCATGTGAAATTCCTTTTCTTTGGTACATATATGGTTAAATGTTATAGCTGATGTGGCTTGATTCAACACCAAACCTGTCTATGAGATACATTGCTGTAATTTACATTTTGCAAGATGCATATAATCAGATTATAATTTTTTTATTCTTATCCAAAGTCTACATGAATACTTCCCCGCAAAAAAAAAGGTCTAAATGAATACTATTAAAATCACTCATCACATAGCTGCAAGACTTAGAAATAGTGATTTATCTCTGAGTTATTGAACAAGCAGGAACCGAATAGTCATGGGAGAATCATACTCCTTGAACTTTCAATTTTTCATGGGGAGCAAATATTCTTTTCAATAACATCGCATGATCTGTTTTTTATTTGGCGTTTTTATCCATTCATCTAATCTTTGCTCTCACAGGAAACTTTATACATGCTAATAATTTACTGTTGGGACCATTGGTAATAATATTTGGATAACTGAATCATCACATACAAACTAGATCTTTCTGAGACTTGAGGTCCTTAATTTGAAAGATCTTTCAGCCGGCTTATGCCGGCCCGACAAAAATAATTTTGAAGATTTTTTACTTTTAACTTTCTTCATTTCGCCATGCTGATCTAATTTTTTTTAGTCATGGCTGTTTTCAGACTGATATGCAGTTGAGGGACAAAATTCTAGTACTCCTTGAATCTTGGCAAGAAGCATTTGGTGGGAATGGTGGGAAGCATCCCCAGTACTACTGGGCATATGCTGAAATGAAGGTCTGTTCAATATGTCAGGAACTGTTGTCATGCTACATGGGAATTATTTATGCTGCCTTTTAAAGGGATTCCTGTGACTACATTTTGATTTTAGATAACCTGCAGCTTGATGACTTGATTATTTAATTGTTATACTGTCAAATTTTAACCACAAGTGTAAAAGTTCAATGAGTTTATGGTATTAATACAATTAATGTTTGAGGTTAGTTTAACTTGGATTTTTCTTTGCACCTTCATTGTCTGGCTCCTGTCAGGATAACTATTTTGTGTGGTATTTATCATAAGTTAAACACATGATTAACTACCAAATGGATGACTTCATAAAATCTTTGAAATACATCCCTGTATGAAAAATACTTTTCATGACAACTAATAGTAGAATACTACAATTTTCTATAATAGCACTCAAAGTTAAAGAAGCTTGATTATGAGGAATCTAAAATTCCATACATGTATGAATAGATTTAGAATGAGTTAGAGACGACAACAGTTAGTTTCCTTATAAGATTGATTCATTTCCCTTGTCTAGGATTGTTTCTTAGGTGTCTAAGACAAGAGGGATAATGTGCATTATTATCAATCAAGGAATAATTGTTGATCCTTTTCTCAAAGTTCAATTATCAGCCTTTATGGTCCCATGTTCTCCATCCCTCCCCTTTAGCCATGCTATTATATGGCCATCTTTTGCACAGTAGCTACCCTGATATGAACCAAGAGAGGATCCATGCTTTACAATTTGTTCATGTTTACAATATATATCAATATTATACCTATATGGAAACCTTCAGATAAATGAAGTTGTATCATTGTTCTATTCTATTCTGGAACATTATTTTCGCACAAATCAATGAGTATCTTTATCTGCAGAAATTGGGCTTGGAATTTCCTCGGCGATCACCTGATGCTGCACCAATACTTACTCCTCCAATCACACGCCCAACATCTTTGGAATCTTATCATCAACCAAGTTACGGAATGCCAGTTAATTCTTCCTCTAGATTTGATGAGGCAATGCCATCTAACGGGCCTTCCCTGAGGTGACATCATTTTAATATGTTTTATTAATGGAAATACTATTCCTTTTCTCTCCCATGTTGTATGACAATTAATTTTTCTTTAGTTCATCGGAGATGGAACGCATGTTAGGTGCTGTTGAAGTATTAAGCGAGATGCTGAAAGCAGTGAATCCACATGATCGTGGGGTATGACATGTGATGTCTATTTGATGATTTCTTGTCCCTATTTTATTTTAATGTTAAAAAGGGTCATCGTTATTATCAGATCAACAGTTTCAGTTTTTTACTGTAGAATCCTTGGCTGCCATGTACCTTCCTTTTAACTTGGTGTTGCAGACTTCAAGTGATTTTTTTATTGCTCTTTTTCTGAAACTAAAAACCTTTTTGGCAATGTAGGCTGTCAACGATGAAATTATCACAGAGCTTGTGAAACAATGCCGGTCAGACCAGAAAAAGATAATAAGTTTGGTAACTTCATTAAGGTATATACTTCTATAAACACTCTGCCCTGCATATTTACTCTGTTATCTTTTCAGATTGGACAGTTCCATTGATTTGGTGATGTCATCTTTTGCTGTTAGGATGCTGGAAGTTGCTATTTGATTCCAAAGTAGAACTAACACACATGAATCTACCTACTTTAGAGTATAAATGTATGAAGCTAGGCGTGAATAAAATTTGATTGGTTTGCAATGCATACAAAGTGAGGAAAAGAACAGAGCAACATCTTAAAATCCTGGGTCTACAGAACATCTTCTAGCCATTTTGTTCATAAAAACCTGAAGGAGAATAGATAATAAAATTATTCTCATTCATGTATAAGATGGACTCTATACGATATTATATGGATCTAGTAGCCATGCGACTTGGTTAGATGAAGCTATGCATAATGGCTACGAAAAATTAAAAATTAAAAAGTTAAAAGTTGTGTATTGCTTGAAAGTTCTGCTGCCTGAACTGAAAGCTTGTGACCTTATGACTCATTCATAAGAATATGATGTAACCTATTGAGTTTGCCTACAACAACAAGGCACCATAATTTCACTCAGTACTCACACACCCTTGGCCTGCTGCCAACCATGCTTCCCCGAATTCTAGCACTCGTTAAGCCTCTATTAGACTATTACCATGCCCCACCAGATTTTTAAGAGGGAGGGGTTCAGGTAACTATAAAACTGTATATTTAGTTTTCCTGCTGGAAGCCTGGGAGGTGTTGTTCCCACTTTTTTTTAGAGACATAAATATTCTCCAAGGAGATGATTTTACTTTTTGTTTTGTTTAGAGATTTTTTAGGGATGTGGAAGAGGGAGGGAATAGAGAATGAGCCACCAGTTTCCTTTGAAAATTGTTTAAATATATACATTATTCTTTTTATTTTGGTGTTATTATCATTGTCTCAAGTTCATCTGCTGCATTATTACAGAGATGAGGAGCTCTTGGGCCAAGCTCTTGACTTGAATGATAGGATGCAGATTCTGCTTGGCAAACATGATGCAATTGCATCAGGTTCTCCTCTACCAGATGAAGAAACAGATATCATGAATGAATCATCAGCAGAAACAACTTCAACTCCAGTGGCAACAGGGGCTCCTCGAGCTGCAGTTGCTGCTATAGTACCAACTAATGTTTTCGATGAAGAGGAGGAAGATGAAGATGACGAGTTCTCTCAGCTCGCTCGCAGGTTGTTCTGATTGCCGACAATATTCTTGTTTCCTACCCATTTATCCTTGAAATCATCCAGACCTGAGTCAATCTTGTGATCAGGAATTCGAAATTCAGGTCTACAAATGCTGAGAGCACCCCTTCTGGCGTAGCAACATCTTTGTCGACCGCCCATGACGATGAGATAACAAGTTCAGGATCCTCTGGTACCTCTACAGTTTCACCACCTGTTCAAAGCCATGCATTGGCACTGCCTGATCCTCCAGCTCCTGTTAGAACTGCAGAAGAGCAAGTTATGAGTGACCTTCTTGCACTCACCATATCAAACCCTTCACCACCTCAAACTCCACCAACACCTGAAGCTACCACCACCATGAACCAAGGTGGCTCGCAAGCCAATGATCATCCACAACCTAGTTACTCAAACCAAGGACTTGCTGCTGCATCATACAACAGCTATGCTGCTCCTTGGGCTCAGCCTCAATGTCAAACTCCAGGCATTCAGCTTCAGCAGCATCAACAACCATCCCAGTCACAATTGCCCTACAACTCATCTCCCTACCCGCCACCGCCATGGGCATCGGAGGACACCGCCGAGTCCAACCCTTTCATTGCAGCTTCACTGAAGAACCAACCTAATTCCGCCTCGCCGGTTAATGTACCACTGAATTTGAGGCCTCTACAGCAATCAAATTCTTTCGGGGTTCCGCTTCGAAGTGCCGGGCCACAATCGCCGATAAACGGGAGCACTAAGCAACCGATGTCTGCAGGAGCTCGCAGGCCATCTTATGTTTCTTCTAACAAATACTTCGATGATCTGTTTGAGAAAAATGCTGATGGCAGCCTGATGAAGGTGGGCGGTAGCGTTGGTGGGGGCGCATCCTCGCCATACAAGACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018268