BGIOSGA018277

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Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018277| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018277, complete gene.| tag = OJ1005_...")
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Gene Name

BGIOSGA018277

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018277, complete gene.

LocusTag

OJ1005_D04.17

Ensembl Transcript ID

BGIOSGA018277-TA

Ensembl Protein ID

BGIOSGA018277-PA

Length

3105

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16296821..16299925

Sequence Coding Region

16299798..16299925,16299538..16299676,16299394..16299451,16298149..16298191,16297935..16297983
,16297757..16297837,16296821..16297666

Genome Context

<gbrowseImage1> name=IndicaChromosome05:16296821..16299925 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:16296821..16299925 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGCTACAGTTTGGAGGTACCTTGGCTCCCAAACTTGGGGAAAAACCTCAGGTGTTGCCCAGGTCACCTGCACTTACAAGAGTTATTTATGCTGATCCAAGATTTCTGGTGTCGAAAAGTGGTAGTAGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCACGGACATCTTCTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGTTCAAGGTTCATTGTCAGAGCTGATGCTGATTTCTATTCCACACTTGGTGTTTCAAGAAATGCTAGTAAATCTGAAATCAAGAGTGCCTATCGGAAGCTTGCTAGGAGCTACCATCCTGATGTGAACAAAGATCCTGGTGCTGAACAAAAGTTCAAGGATATTAGCAATGCTTATGAGGTTTTGTCTGATGATGAGAAGCGATCAATCTATGATAAATATGGAGAAGCTGGTTTGAAGGGTGCTGGAATGGGAACAGGAGATTACTCAAACCCATTCGATCTCTTTGAATCATTATTCGAAGGCTTTGGTGGAATGGGGGGAATGGGAGGCCGTGCTGCTCGGAACAGACCAATGCAGGGTGATGATGAGGCCTACAATCTGGTACTCAATTTCAAGGAAGCGGTGTTTGGTGTAGAGAAAGAAATTGAGATCACCAGACTGGAAGGCTGTAATACATGTGATGGAACTGGTGCCAAGCCTGGAACGAAACCAACCACATGCAAAACATGTGGAGGACAGGGACAAGTGGTCTCCTCAACAAGAACGCCACTTGGAATATTCCAGCAGGTCTCCACCTGCAATACTTGCGGAGGCACTGGTGAATTCTCTACCCCGTGCAACACTTGTGGGGGTGATGGCCGAGTGCGGAAGACAAAAAGGATCAGTCTAAAGGTTCCTGCTGGTGTTGATTCTGGAAGCAGATTGAGGGTCCGGTCTGAGGGGAATGCTGGGCGGAGAGGAGGCCCTCCTGGAGATCTTTATGTGTTTATTGATGTTCTCTCTGATCCTGTTCTTAAGCGAGATGGGACAAACATTCTATACACATGCAAAGTTTCATATATTGACGCAATTCTTGGGACAACCGTCAAGGTTCCCACTGTTGATGGGATGGTTGACCTGAAGATCCCCTCCGGTACCCAGCCAGGCACAACGTTAGTGATGTCCAAGAAAGGTGTCCCACTCCTCGGGAAGTCAAATGCTCGTGGAGACCAGCTAGTGCGTGTGCAGGTCGAGATTCCAAAGCGTCTGAGCAGCGACGAGAGGAAGCTGATTGAAGAACTTGCAAACCTAAACAAGGCTCAAACAGCAAACAGCAGGAGATAA</cdnaseq>

Protein Sequence

<aaseq>MALLQFGGTLAPKLGEKPQVLPRSPALTRVIYADPRFLVSKSGSRGRLKHLVSPTASLQSRTSSRLFNHAPSPRFRHRRSSRFIVRADADFYSTLGVSRNASKSEIKSAYRKLARSYHPDVNKDPGAEQKFKDISNAYEVLSDDEKRSIYDKYGEAGLKGAGMGTGDYSNPFDLFESLFEGFGGMGGMGGRAARNRPMQGDDEAYNLVLNFKEAVFGVEKEIEITRLEGCNTCDGTGAKPGTKPTTCKTCGGQGQVVSSTRTPLGIFQQVSTCNTCGGTGEFSTPCNTCGGDGRVRKTKRISLKVPAGVDSGSRLRVRSEGNAGRRGGPPGDLYVFIDVLSDPVLKRDGTNILYTCKVSYIDAILGTTVKVPTVDGMVDLKIPSGTQPGTTLVMSKKGVPLLGKSNARGDQLVRVQVEIPKRLSSDERKLIEELANLNKAQTANSRR</aaseq>

Gene Sequence

<dnaseqindica>1..128#250..388#475..532#1735..1777#1943..1991#2089..2169#2260..3105#ATGGCGCTGCTACAGTTTGGAGGTACCTTGGCTCCCAAACTTGGGGAAAAACCTCAGGTGTTGCCCAGGTCACCTGCACTTACAAGAGTTATTTATGCTGATCCAAGATTTCTGGTGTCGAAAAGTGGGTATGTGAATGTGTTCTGATCAGTGAGATGTACTAGGAATACTAAAATAAAGGACACATTGACATTATAAAAAGGCAAGATTTCTGAGTAAACTGAAGATGATATATCTCTTTTTGTGCAGTAGTAGAGGCAGGCTTAAACACCTTGTATCACCTACTGCTAGTTTACAATCACGGACATCTTCTCGACTATTTAACCATGCACCATCACCGAGATTTCGCCATCGAAGGAGTTCAAGGTTCATTGTCAGAGCTGATGCTGTGAGTTACTTCATTTGCTTTTCTTCTTTGCTGGTATTATTAGAAAATCCAGTTTCCTGACATGGATTTGATATTTTAATTTACAGGATTTCTATTCCACACTTGGTGTTTCAAGAAATGCTAGTAAATCTGAAATCAAGAGTGGTAGGTGTGGTTTTATTTGTCAGTTTAGGGCATGCAGTGATTGGTGCTCCGTACAATCGTAGGAGTATTACCCAGCTTTGCTTCTTCTCTAGTTTGAGCCTGGTTGTAGGTTTGTAGGTACCCTATAATTTACCAAACAAACCAGACTACTTTCATGTGGCTATTAGTCGTAGATTACTAGTTTTAAATCATACTGTTCACGTGTGAAACAAAATATATGTACAGCAGAAACTGTTAAGCTTCCCAGGGAAGATATGAAATACATAACTAGTCTTTTTCAAACTTGGCCATAGTGAGCTTTATGGCCCACTTGTTTGTTCTCGAAAGCTTTACTATTCCTACTATTCCCTCCGTTTCATATTATAAGACTTTCTAGCATTTGCCATATTCATATAGATGTTAATGAATGTAGACACATATATATGTCTAGATTCATTAACATACATATGAATGTGAACAATGCTAGAAAGTCTTATAATATGAAACGGAGGAAGTAGTAACTTAAATGTTTGCTATTTCGTCTAATTTGAAGGCTATCTCAACAAAACCCCTTGAACTATTCTAAGACAAGCCTATGCTGTCTTCAGTATCATTTTCTGCAACTGATTATCTTGCATTCTAGACTCGATACTGTTTATATTTCTGAAAATCTATTGTAGGCAACTTCTCGTTGATGCATTGTTTGTATGGCCCTCAATCCCTGCCCTCCACGTGTGTGGGCTGAAACTTTGAGCAAAAATCCCAACCCACACCCGTAGATATCTAGGATTTTGTCCTATCCAAATAATGTCTAAGGGGATACTCCTTCCGTTCTTTAATAGATGACGCCGTTGACTTTTTCTCACATGTTTGACAATTCGTCTTATTCAAAAAATTTACGTAATTATAATTTATTTTGTTATGAGTTGTTTTATCACTCATAGTATTTTAAGTGTGATTTATATCTTATACATTTGCATTTATTTTGTTATGAGTTGTTTTATCACTCGTAGTATTTTAAGTGTGATTTATATCTTTATACATTTGCATAAAATTTTTGAATAAGACGAATGGTCAAACATGTGAGAAAAAGTCAACGATGTCATCTATTAAAAAACGGAGGGAGTATTATGTTAGAAATCCTTCAGAGTCAATTTTGATCAAAATATGTGTAGTAGTTTAATGTTGCTTTCTATTGTAGTTCTAAAATGATCCTTTTCCAGCCTATCGGAAGCTTGCTAGGAGCTACCATCCTGATGTGAACAAGTAAGTACTAACCATTATATGGGAATTGTGTTTCAGCTACACTCGATATATTGCTTCTTTTTCTCCTTTCGATCCATTATAAACCTGAGTACTAGTTGTTGCATTACCTTTTTCATAACTACATAATCAAATAAGCAATTGTTATGCTTGTGTATTTTTCTTTAGAGATCCTGGTGCTGAACAAAAGTTCAAGGATATTAGCAATGCTTATGAGGTTAGTCCAGCTAACCATAACCAAATCCCATTGTTTCTTATGACTATGTTGTTGTAGGGTTACAGGTGCTTGCCAGCTAACATAAATAGGATTGCAGGTTTTGTCTGATGATGAGAAGCGATCAATCTATGATAAATATGGAGAAGCTGGTTTGAAGGGTGCTGGAATGGGAACAGGAGTGAGTGTTCCTAGAATGTTGTCCAATTCTGAAGTATGATCGGCATGACCTTTATATGATATTGATTGTATGAAATTTGTGAATCTGCAGGATTACTCAAACCCATTCGATCTCTTTGAATCATTATTCGAAGGCTTTGGTGGAATGGGGGGAATGGGAGGCCGTGCTGCTCGGAACAGACCAATGCAGGGTGATGATGAGGCCTACAATCTGGTACTCAATTTCAAGGAAGCGGTGTTTGGTGTAGAGAAAGAAATTGAGATCACCAGACTGGAAGGCTGTAATACATGTGATGGAACTGGTGCCAAGCCTGGAACGAAACCAACCACATGCAAAACATGTGGAGGACAGGGACAAGTGGTCTCCTCAACAAGAACGCCACTTGGAATATTCCAGCAGGTCTCCACCTGCAATACTTGCGGAGGCACTGGTGAATTCTCTACCCCGTGCAACACTTGTGGGGGTGATGGCCGAGTGCGGAAGACAAAAAGGATCAGTCTAAAGGTTCCTGCTGGTGTTGATTCTGGAAGCAGATTGAGGGTCCGGTCTGAGGGGAATGCTGGGCGGAGAGGAGGCCCTCCTGGAGATCTTTATGTGTTTATTGATGTTCTCTCTGATCCTGTTCTTAAGCGAGATGGGACAAACATTCTATACACATGCAAAGTTTCATATATTGACGCAATTCTTGGGACAACCGTCAAGGTTCCCACTGTTGATGGGATGGTTGACCTGAAGATCCCCTCCGGTACCCAGCCAGGCACAACGTTAGTGATGTCCAAGAAAGGTGTCCCACTCCTCGGGAAGTCAAATGCTCGTGGAGACCAGCTAGTGCGTGTGCAGGTCGAGATTCCAAAGCGTCTGAGCAGCGACGAGAGGAAGCTGATTGAAGAACTTGCAAACCTAAACAAGGCTCAAACAGCAAACAGCAGGAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018277