BGIOSGA018303

From RiceWiki
Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018303| Description = Os05g0320100 proteincDNA, clone: J090086B10, full| Definition = Oryza sativa Indica Group BGIOSGA018303, complete gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018303

Description

Os05g0320100 proteincDNA, clone: J090086B10, full

Definition

Oryza sativa Indica Group BGIOSGA018303, complete gene.

LocusTag

OS05G0320100

Ensembl Transcript ID

BGIOSGA018303-TA

Ensembl Protein ID

BGIOSGA018303-PA

Length

2891

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15787336..15790226

Sequence Coding Region

15789101..15790226,15788563..15788611,15787904..15787931,15787336..15787350

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15787336..15790226 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15787336..15790226 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACCGCCTCCGCCGTCGCCGCGGCACCTCAGTGGCGCCGCCGGTGACCCTGCCGGACGACGACGACCTCCTCTCGGAGATCCTCCTCCGCCTCCCGCCGCGTCCCTCCTCGCTCCCCCGCGCCTCCCTCGTCTGCAAGCGCTGGCGCCGCCTCGTCACCGACCCCGCCTTCCACCGCCGCTTCCGCGCCCGCCACCGGAATCCACCCCTCATCGGCGTCTTCGAGGACTACCTCGGATACCCCTTCTTCCGGTCCGTTCTGGATCCGCCGGATCTCATCCCACGGGAGCGCTTCAGGTTGCGGCTCGCCGAGGACGAGGGCGGCCAGTGGCGCTTCTACGGCTGCCGCCATGGCCGCGTCCTCCTCTTCAACCGGGCCAAGAATGAGATCCTTGTGTGGGTCCCCGACACCGGCGACCACCGCCGGGTGGCCGTTCCGCCGGAGATTGACGGCAAGGAGAAGATCATTTGGAATGGGGCAGTGCTGTCTGCTGCCACTGCCGACGACGGGTTCAGCTCTTGCCCCTTCAAGGTGGTGTTGGTAGGCGTCGCCGGCAACAACACACAGATGTTCGCCTGCGTTTACTGCTCGGAGTCCGGCAAATGGAGTGATCTCATCTCAGTAGCTGCTCCCTTCTTGGTGTTTTTCTTTCGTGATCCTGGCATACTTGTTGGCCATGCCCTGTATTGGATGGCTTCTGGTGATCATGGGAGTACCATTCTTCAGTTTGATTTGGATGATCAAACCCCCGCCGTGATTGAGTGGCCCTCCGATTCCGATCCAAATTGCTACACTCAGACCTGGCTGACAGAAGGTGATTGTCTTCGCGTCGCCACTTTCTCTCGCGGAAGCCTTCAAATGTGGGAGAGGAAAGTCTGTTCTGAAGGTGTTGCCAAGTGGGTGCTGCAGAAGAGGTATGAGCTGAAGAATGTTCTTAACCCGGAGATTAGGTTGAATGTAGAGTATGTAACAAAGCTGGGGTATGCTCAGGATATAAAGGTGATGTTTGTATGGGCTGCTCACAGTGTCTTCATGCTCCAACTTGATTCGTTGCAGGCCAAGAAAGTTTGGGAAAGTTGTGTCATCGCCCCAATTCATCCCTACGCAAGTACTTATGTTGCAGATTATGTTAGCTTGAGGATGCATTACTCTAGTCCATTTATATACACACGGAATTATGGTTTAAGAAAAACTGGTAAGGTATCTAGACTTTGA</cdnaseq>

Protein Sequence

<aaseq>MNRLRRRRGTSVAPPVTLPDDDDLLSEILLRLPPRPSSLPRASLVCKRWRRLVTDPAFHRRFRARHRNPPLIGVFEDYLGYPFFRSVLDPPDLIPRERFRLRLAEDEGGQWRFYGCRHGRVLLFNRAKNEILVWVPDTGDHRRVAVPPEIDGKEKIIWNGAVLSAATADDGFSSCPFKVVLVGVAGNNTQMFACVYCSESGKWSDLISVAAPFLVFFFRDPGILVGHALYWMASGDHGSTILQFDLDDQTPAVIEWPSDSDPNCYTQTWLTEGDCLRVATFSRGSLQMWERKVCSEGVAKWVLQKRYELKNVLNPEIRLNVEYVTKLGYAQDIKVMFVWAAHSVFMLQLDSLQAKKVWESCVIAPIHPYASTYVADYVSLRMHYSSPFIYTRNYGLRKTGKVSRL</aaseq>

Gene Sequence

<dnaseqindica>1..1126#1616..1664#2296..2323#2877..2891#ATGAACCGCCTCCGCCGTCGCCGCGGCACCTCAGTGGCGCCGCCGGTGACCCTGCCGGACGACGACGACCTCCTCTCGGAGATCCTCCTCCGCCTCCCGCCGCGTCCCTCCTCGCTCCCCCGCGCCTCCCTCGTCTGCAAGCGCTGGCGCCGCCTCGTCACCGACCCCGCCTTCCACCGCCGCTTCCGCGCCCGCCACCGGAATCCACCCCTCATCGGCGTCTTCGAGGACTACCTCGGATACCCCTTCTTCCGGTCCGTTCTGGATCCGCCGGATCTCATCCCACGGGAGCGCTTCAGGTTGCGGCTCGCCGAGGACGAGGGCGGCCAGTGGCGCTTCTACGGCTGCCGCCATGGCCGCGTCCTCCTCTTCAACCGGGCCAAGAATGAGATCCTTGTGTGGGTCCCCGACACCGGCGACCACCGCCGGGTGGCCGTTCCGCCGGAGATTGACGGCAAGGAGAAGATCATTTGGAATGGGGCAGTGCTGTCTGCTGCCACTGCCGACGACGGGTTCAGCTCTTGCCCCTTCAAGGTGGTGTTGGTAGGCGTCGCCGGCAACAACACACAGATGTTCGCCTGCGTTTACTGCTCGGAGTCCGGCAAATGGAGTGATCTCATCTCAGTAGCTGCTCCCTTCTTGGTGTTTTTCTTTCGTGATCCTGGCATACTTGTTGGCCATGCCCTGTATTGGATGGCTTCTGGTGATCATGGGAGTACCATTCTTCAGTTTGATTTGGATGATCAAACCCCCGCCGTGATTGAGTGGCCCTCCGATTCCGATCCAAATTGCTACACTCAGACCTGGCTGACAGAAGGTGATTGTCTTCGCGTCGCCACTTTCTCTCGCGGAAGCCTTCAAATGTGGGAGAGGAAAGTCTGTTCTGAAGGTGTTGCCAAGTGGGTGCTGCAGAAGAGGTATGAGCTGAAGAATGTTCTTAACCCGGAGATTAGGTTGAATGTAGAGTATGTAACAAAGCTGGGGTATGCTCAGGATATAAAGGTGATGTTTGTATGGGCTGCTCACAGTGTCTTCATGCTCCAACTTGATTCGTTGCAGGCCAAGAAAGTTTGGGAAAGTTGTGTCATCGCCCCAATTCATCCCTACGCAAGTACTTATGTTGCAGGTACTTATGTTTTCAGCATTTAACTGCATAACAGATTAATAGGTGTAGTTGTATAAACACGAAATAAAAAGCACAGAATCTAGATTTGAATCATCTGGCGTCTCAAATAAGTAATTTGCTCGCTCATTTCAGAAGGTAACACTGTTTTTTTTTTTCATTCAATACCTGTTTGAGCGAGATGACATTTTAGAAGCCTTGCGGTCCACCTTGTTTTGAATTTTGAACATTGCAAGATGTAGAAGTATTTAGATTTGTCATGGAAAATAATTGCATGGTATTTTGTTTTTATTTACTCGAAAAATTAATGTTCAGTCTTGTCAAAAGAGGGTAAAAAGTCAGAAGCATCACCAGTAAGAAATTAATTTGCACCTGCATAGAAATGTATTAATTTGCACCAGGAAGAAATATATATACATATATTTTTTGTATTATCTTTTTTCTAGGATAACATTCTGCTTGTCAACGAAGTTCTAATTTTTTTTTTACTAGATTATGTTAGCTTGAGGATGCATTACTCTAGTCCATTTATATACACACGGTCAGTGCAGCAGAATAATTTTAGTTAACTTGTGCACCCATAGTTATAAGGTTTATTAACATAAATTTTCGAGGAATATTTGCTTCCCTTTAGAATTTTATTCAGTTTACATTTGTGATATCTCTCAGTACGTGTGTTTTTTTAATGTGTGGAGTCTACTATTTTGGGTTAGGGTGTGTTTGCAAGAGGAAGTTCCCAACACTCCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTACTAAACGGTGTGTTTTTTGCAAAAAATTTCTATACAAAAGTTCTTTACAAAAATCATATTGATCCATTTTTTTAAAAAAATAGCTAATACTTAACTAATCACGCGCTAATGGACCGCTCCGTTTTCCGTGCATGGGAGATGGGTTCCCAACACCCACCTCCAAACACAGCCGGCTTTGCATGGTGATTTGTGATTAAAGAAGTATCTGTCTGATTATGATTTTGTCAGATGACCACCGTATTTCTAAAATAAAATAGATAACTAACTACAGTAAAGAATTCCTTGATAGATGCTTGGAGCTCTAGTTCAAGATGAAATTAACTAGATCCCTCACTTGCATTCTGAATGTTCATAGTTTTTCTATTTCTTAGTACTAAATTTTTCAATGGCAGGAATTATGGTTTAAGAAAAACTGGTAAGGTTTGTTTTGGTGCCATGCTAAGATAAATGATATTTGTCGACCAAAAGAGGTTTCACTTATGAGATATTGAGATACACATTAGATAGAGTTGAGTGTACAATCACAAACGGTAGTAATCATACATGGCTGGTGTCCTTATGCCTCTCCGACAACTTTTAATTTGAACATAGTAATTATTGATTGGTTCTTAAATTTCTGAAAGAATACGTATGAACTAGAAACAGGTGTTTCTACTTTCTACCTGCTATGTGTGGTTGTGCCCCTCATCTGCCAAAATGAAGCAATGAAGTAGTAATCCTTTAGTTGCTAGATAGATGTAGCCAAAGTTCGAGAATAGTTCCAACAATTCAATTGTTCCTCTATCGTTGTTCACTGTTTCTTCTTTTTGTTTTTGCCTGGTAATAATACTGACATTATTCAACTTTGGAAATTTGATGTGCGGTTCACAATGCTGAAAATAGTAGTTGCAGTTTGCATTGCACCAAAAAAAAAAAGTGATATAACTTTGTGACTGTAAATACCAGAATGACTGATGGAATTGTTCTCCTGCAGGTATCTAGACTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018303