BGIOSGA018316

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Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018316| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018316, complete gene.| tag = OJ1333_...")
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Gene Name

BGIOSGA018316

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018316, complete gene.

LocusTag

OJ1333_C12.1

Ensembl Transcript ID

BGIOSGA018316-TA

Ensembl Protein ID

BGIOSGA018316-PA

Length

6404

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15457257..15463660

Sequence Coding Region

15463062..15463660,15462569..15462760,15462384..15462465,15462083..15462274,15461825..15461938
,15460860..15460953,15460628..15460785,15458623..15459042,15457257..15458030

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15457257..15463660 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15457257..15463660 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTATCCCCTCCTGCCCCCTGCCTCGCCTCCACCTCTCCCTCCAACTCCACAACCCCAGCGCCATCCCGAGTCCCCGCCGCCGGCCGCGCCCCGCCCCGACGAGCGAGACGCTCCGCCGCCGCCTCCTCCGCAAGGGCGTCTCCCCGACCCCCAAAATCCTCCACGCGCTCCGCAAGAAGGAGGCCCTCAAGTCCCTCCGCCGCGCCAGGAAGGACACCGCCGCCGCCGCCGCGGCCGCGGAGGCGGCCAGCAATGCGCTGCCCAGGGAGGAGGACGGCGCCGCGGTGGTGGGCGAAGACGACGAGGCCCGCTTCCGCGCGGCCGTCGCCGAGTACCGCGCGCTCATGGGCCGGCCGTGGCACGGCGGCGCCTCGACACCCCCGCGTGGGGCCCTCCGAGGCGAAGGCGAGGGCCTCGACGGCCTCCGCGAGATGCTCGCGGCGAGGAGGGCCGGCAAGTTCGAGTGGCTACTGGAGGATGATGACGTAGAGGAGGGTGAAGAGGAAGCGGCGGTGGGGAGGCGGGGGCGTGCTGGCGTCGGCTGGAATTCGGATTTTCGGGATGAGGAGAGGAGGATTGAGTCGCTGGTGAGGAGGCTGAACGAAGATGATCTAAGTATGCGTGATTGGAGGCTTACTAGATTGATGAAAAAAGCTGACCTAATATATAATGAAGATAATCTGCTACAAATACTGGAAGGGCTTGAGGCAAGAGGAAATTGGAGGCAGGCTTTATCTGTTACTGAGTGGGTGTACAATGAGAACATCTACAAGCATCGAAAAAGCAGGTTCGTGTATACAAAATTACTATCAATCCTTGGAAAAGCATGGAGGCCAACTGAAGCACTTCGAGTTTTCACCATCATGCGGAGTGATGCTCAAATATACCCTGATATGGCTGCATACCATAGTATTGCTGTTACACTTGGTCGAGCTGGCCTTCTAAACGAGCTAATCAAGATTATAGAGTATATGAGACAGAAGCCTTCGAAAAGGGTAATGAAGATGCGTCGCAAAGATTGGGATCCTTCCTTGGAGCCAGATGTTCTGATTTATAACTCGGTCCTTAATGCATGCGTTCTATCACAGCAGTGGAAAGGGGTATTTTGGGTGTTTCAGCAAATGAGAAGGAATAGTTTGATACCTACAGGAGCAACATTTGGGTTAGCGATGGAGGTCATGCTTAAAGCCAAGAAGTATGACTTTGTCCAAAAGTTCTTTCAGAAGATGCAAAAAAGTGGGGTACCTCCAAGAGCAATAACTTATAAAGTTCTAGTAAGAGCCTACTGGGAACAAGGGAAAGTAAATGAAGCAGTTGAAGCAGTTAAGGACATGGAACAAAGGGGAATTGTTGGAGCTGCAAGTGTTTATTATGAACTAGCTTGCTGTCTCTGCAATAAAGGAAGGTGGAGAGATGCTTTGTCACAGGTTGAGAAGCTAAAACAGCTTCCGCTCACTAAACCGCTAGAGTTCACATTTACTGGCATGATCTTAGCCTCTTTTGATGGTGGATATATCTCAGAATGCATCTCAATATTTGAGTCAATGGAAGGGCACTGTGCACCAAATATTGGTACAATAAATGTCATGATAAAAGTGTATGGACGCTGTGATATGTTTGTGAAAGCAAGGGACTTATTTGAGACCATCAAAGTTAATTTGCCTAGTTCAAATCATTCATCACATAAAGCAGACGCATATACATACAGCTCTATGCTTGAAGCAGCTGCATCTGCCCAACAGTGGGAATACTTTGAAAATGTGTATAGAGAGATGACTCTCTCTCAGTACCACCTAGATCAAAGCAAATATTCATGGATGCTCATCAAGGCATCCAAAGCTGGAAAGTCATATTTGCTGGAACATGCACTTGATTCAATACTTGAAAGAGGAGAGACCCCCAATGTACAGTTATTTAGTGAGATGATATGCCAAACTATTGCTCAAAGAAACTATGCAAAGACACTTCATCTAATAAATATTATGGCTGAGGCTTCAACTGATGTCAGTGAACTTCAGTGGAGCAAGCTACTTGAGCAAAATATGCATCGATTCAGCGTGAATGCTTTGAAAGATCTTTTAAAGTACCTCAGTACCAGTGATATCATCAAATCGGATCCCGAACTTTGTTTTGTAAGTGCACTGCAATCTCAATGTGGGACAACTTTTGTGAACGACACTTCTTTTGTGGCTGATGGTACATATACTGGACAGTCTCAACTCTCTCTGCCAGAGAATATAACCAAGTCTTCAAATAGCAATCTAGATCAGCTTTCTTGCATGAATTCGCTAAACACAAATGTATTTCCCGATGAGAAAGTTAGCAGTGAGTTCTCTGATTACATTATGAATACTCCACAATCTGATGCTAATGCTGGCTTGAGCGAGGACATTGTTATAGGTTCACATTTTGAGAGTGAACAGAAAGAACAACATGATCTCGGCTGGTTGGGGACAGGAGTATCTGCAGTTGACGAAGTACTTGATTCAATGAATTTGTATGGTGATGGTTCATGCGGAGAGATGCCGTCAGCATCAGAAATTCTTGAATTATGGGAGCAGGATAGGATAAATGGGACGTTTTCTGCTAAAACGGCTGAACCACCATGTGAGGATAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MVIPSCPLPRLHLSLQLHNPSAIPSPRRRPRPAPTSETLRRRLLRKGVSPTPKILHALRKKEALKSLRRARKDTAAAAAAAEAASNALPREEDGAAVVGEDDEARFRAAVAEYRALMGRPWHGGASTPPRGALRGEGEGLDGLREMLAARRAGKFEWLLEDDDVEEGEEEAAVGRRGRAGVGWNSDFRDEERRIESLVRRLNEDDLSMRDWRLTRLMKKADLIYNEDNLLQILEGLEARGNWRQALSVTEWVYNENIYKHRKSRFVYTKLLSILGKAWRPTEALRVFTIMRSDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIEYMRQKPSKRVMKMRRKDWDPSLEPDVLIYNSVLNACVLSQQWKGVFWVFQQMRRNSLIPTGATFGLAMEVMLKAKKYDFVQKFFQKMQKSGVPPRAITYKVLVRAYWEQGKVNEAVEAVKDMEQRGIVGAASVYYELACCLCNKGRWRDALSQVEKLKQLPLTKPLEFTFTGMILASFDGGYISECISIFESMEGHCAPNIGTINVMIKVYGRCDMFVKARDLFETIKVNLPSSNHSSHKADAYTYSSMLEAAASAQQWEYFENVYREMTLSQYHLDQSKYSWMLIKASKAGKSYLLEHALDSILERGETPNVQLFSEMICQTIAQRNYAKTLHLINIMAEASTDVSELQWSKLLEQNMHRFSVNALKDLLKYLSTSDIIKSDPELCFVSALQSQCGTTFVNDTSFVADGTYTGQSQLSLPENITKSSNSNLDQLSCMNSLNTNVFPDEKVSSEFSDYIMNTPQSDANAGLSEDIVIGSHFESEQKEQHDLGWLGTGVSAVDEVLDSMNLYGDGSCGEMPSASEILELWEQDRINGTFSAKTAEPPCEDR</aaseq>

Gene Sequence

<dnaseqindica>1..599#901..1092#1196..1277#1387..1578#1723..1836#2708..2801#2876..3033#4619..5038#5631..6404#ATGGTTATCCCCTCCTGCCCCCTGCCTCGCCTCCACCTCTCCCTCCAACTCCACAACCCCAGCGCCATCCCGAGTCCCCGCCGCCGGCCGCGCCCCGCCCCGACGAGCGAGACGCTCCGCCGCCGCCTCCTCCGCAAGGGCGTCTCCCCGACCCCCAAAATCCTCCACGCGCTCCGCAAGAAGGAGGCCCTCAAGTCCCTCCGCCGCGCCAGGAAGGACACCGCCGCCGCCGCCGCGGCCGCGGAGGCGGCCAGCAATGCGCTGCCCAGGGAGGAGGACGGCGCCGCGGTGGTGGGCGAAGACGACGAGGCCCGCTTCCGCGCGGCCGTCGCCGAGTACCGCGCGCTCATGGGCCGGCCGTGGCACGGCGGCGCCTCGACACCCCCGCGTGGGGCCCTCCGAGGCGAAGGCGAGGGCCTCGACGGCCTCCGCGAGATGCTCGCGGCGAGGAGGGCCGGCAAGTTCGAGTGGCTACTGGAGGATGATGACGTAGAGGAGGGTGAAGAGGAAGCGGCGGTGGGGAGGCGGGGGCGTGCTGGCGTCGGCTGGAATTCGGATTTTCGGGATGAGGAGAGGAGGATTGAGTCGCTGGTGAGGAGGTATAAGCGAAGAATCTCTCCCTGTTCGTGCTCTTGCTGTTTCAGGCGTTCTTGGCCTTTCACTGCTTTCGAGTAGTGGTGATTGCTTTATGATTTTAATAATCACATTTACAAGAATATGAGATATGGCAGAATTTAGATAGATAGCGGTTTAGGATTCACCTTATGTGCATTTAACTTCATTGCACTCTTCATTATCCTAAATGCCAATGCCATTATTGAGTTAAATCGTTCACAATGAATTGAATTGCGTGAAATGTTGTCTTTGTTCCATATTGCATAAGTAAGTTTTTTTTGTCAGGCTGAACGAAGATGATCTAAGTATGCGTGATTGGAGGCTTACTAGATTGATGAAAAAAGCTGACCTAATATATAATGAAGATAATCTGCTACAAATACTGGAAGGGCTTGAGGCAAGAGGAAATTGGAGGCAGGCTTTATCTGTTACTGAGTGGGTGTACAATGAGAACATCTACAAGCATCGAAAAAGCAGGTATATCCTAGTTTACTAGGTTTCAGATCGCTGCAAGCACAAGTTATCTAATGAAATTGAACTCAAGTACTGATGCTTGACTAATGGAATATAACATATCAAGGTTCGTGTATACAAAATTACTATCAATCCTTGGAAAAGCATGGAGGCCAACTGAAGCACTTCGAGTTTTCACCATCATGCGGGTAGAATTTATTTGTTGCCCATTTAGAATTTACTCCATTTGTCTCTTATATTCCAGCCTAAAATTGAGAAAACATAATGGTATAAGCATTATATCTTACTTTAAATCAGAGTGATGCTCAAATATACCCTGATATGGCTGCATACCATAGTATTGCTGTTACACTTGGTCGAGCTGGCCTTCTAAACGAGCTAATCAAGATTATAGAGTATATGAGACAGAAGCCTTCGAAAAGGGTAATGAAGATGCGTCGCAAAGATTGGGATCCTTCCTTGGAGCCAGATGTTCTGATTTATAACTCGGTAAGGATGGCGCCTGATGTTTTTGTTTTATTTCTGTTTTCCTGCACTCTCTTGGAAGAAGTCTTGTTCATAACCTTGCACGTCTTTTATTTTTTTTAACTGTATAACTTTTGCATGTCTTCACTTTGACCATTGTTTTTATAGGTCCTTAATGCATGCGTTCTATCACAGCAGTGGAAAGGGGTATTTTGGGTGTTTCAGCAAATGAGAAGGAATAGTTTGATACCTACAGGAGCAACATTTGGGTTAGCGATGGAGGTATGCTTTTTAACTGTCCATTTTGTCATTTGGCTGATTGGTACTGTTCTATGGGTATTTTGGAAATGTGTTGTACATATTTGGGAACACTTTATGGAAGGTGAAATTTATTTGCAAAGCATGCGTGTGTGAGGTTCACAAGTCCAGTTTAGCTGGGTCTGCTCCTGATGGAAATTAGGTTAGATCAGCTTATGATTCCTGTCTTGTTTTACATGCATCTGCCTTAGAAGTCTGGGGATCGAAACCATATTATTGTAGTCCTCTGATCATCACATTCTCCTTTTCTTTTTGGGAAATATTGGGAGATGCTCCTGCCATGATATAAACAATATAAGTAGTTTTTAATTTTATTTTATAGAAGAGCTAGGAAGAAATGTAAAACCAAAAAGAGCTAGCCAGGAGTGTTGAGACTGAGTTTGTCGCTACCTCTTTAACCCTCTTAGCATTTTTTTTGTACCATTCCTTCTCTTTCAAACATGCCATCCAGTGATGATTATATCCGTAAACATAGCATCCACCGTACTGCTACATGTAATGCCATTTTTCTGCCAACGTTCCTTGTCAAAGAAGCTTGCAAAAAAGAGGTGATGCAAAGTTTCCTCTTCTCTGAACTAAATGCCTTTATTTCCCGCATTAGCTCACACTCATCGTCGTCTTCTTGTTCTGTGCATTCCATTCATGTCAAATGTCGGTAGATTTAGCCTAATAGTTCATAAAGATACCCTTAAGTGCCTCCGTGTAGTAGAGTGGGTTGTAATCTCAAGTATATAGTGTGGTATTGCATACGCAGTCAGTCAATCATAATAAAGACATGTTCTTTCTTACTAAACTTTGATATGGCATTCTATCATACTTACTGGAGTTACTTTAGGTCATGCTTAAAGCCAAGAAGTATGACTTTGTCCAAAAGTTCTTTCAGAAGATGCAAAAAAGTGGGGTACCTCCAAGAGCAATAACTTATAAAGGTAGCAATTCAGATAAAGTTCATTTGACTTCTTTGGTATTGAGATTCATGTCATTTTCCTAATTATGTTCTCAGTTCTAGTAAGAGCCTACTGGGAACAAGGGAAAGTAAATGAAGCAGTTGAAGCAGTTAAGGACATGGAACAAAGGGGAATTGTTGGAGCTGCAAGTGTTTATTATGAACTAGCTTGCTGTCTCTGCAATAAAGGAAGGTGGAGAGATGCTTTGTCACAGGTTTGTGAATGATCATTCATTCATATGCAATTAAGTGCAAACTATACTTCTGTCATCTCTCTAGTGTAACGAAACAAACATTTATACCTTGTAGGATAGTTGCTACGTATGTGATTTTACTCCCTCCGTTCAAAAGTATTATTATTTCAACATCAACATGATCTCTAACACATAACTTTGACTAGCATAGTGTTCCTGTTTTGTAGTGGGTCTCAAATAAATATACTGTAACTCCCAATTTAAACACAGACATAGTTATTCTCAAGCCTAAGTGCCTACTAAGTTGTGTATGTAAATCATGTTACATCAATCAGCAACCACATATCCACAAGTGCAGATAATGCATTCATTTTGCAAAAGGTCTAGCAAACAAATCAACCAAGTCTACATGAATCCATCTATGGAATATCTAAAGTGAAGGAGTACATAGCAAAATTACCACCACCAATTTGTCATTTTAAGTAGTAGATAAAGATCCGATAAAGGAATGGTAAATCTATTACATTTTATATGAGCACTTTAGTAAAAAACAATCAGAAGTTGTTGTATTACAAAAATCTTTTTCATGTGAATCAACGAGATCATCTCTGCCTATCGAAATAATCTGTTGGCAAAACTAAAATTTTGGTCACTAACTCTTGAGTGAGTTTAATTTTCATCTTAAACTTCAAGAAAATTTAACTTAAGCCTCTCTAAGTAAACAGCCCTTCTTTTGGTACTATGTGCCACCGACTAGGATCCTTGTTGGCTCAGGACTGTCCAGTGGGCAATGGTCCCACCATCACATATCATTGTCTTCTTTCTTATCCCTTAACTCTCATCTTGCTACCCAGTTTTATTCTATCTCAACATAGACTTGGAAGGGAATAAATTGTGCTAACTTTGTACTAGTCATATCACAGTTTGGAAAAATGAAAATAAACAGATCATAGCAAATTTTGGACATGCAGCAGTACAAAACCAGAACATTTGCTATGCCGATGACCAACCTCCAAAAACATAACTTGCACCAATTCATGAACAATGTCGTATGTGCCCACAAGCTTGAGATAAAATACGACTGTACTCTTTGGGTGGTTGAACTAGATTAAGATTTAAGAAAACGATTTTTTATTTTTTTTTCCAATCTAAATGGAAATTACCTTACCAGGTCTCTGGTAAAGCCATTAGGCATGCCTTTTTCCACATTAGGAGTTCATACCACCTCAAGTGGCATGCCAACAGTTGAAATTCGAGTCTCTGACTTTGCCTGACAAATCTTAGATGCAATTGGTTTCCTATTTAGCTTTAGAGTTTTATTGCCACAGCATTAAATTTTCTAATAAGTCATGTTTACCTGTATGATTTGAAAACTATTGTATTTGACTCTAGATGATGTTCTCCAATAGATGTCATTTTATAATATAATGTGCGGCAGTCAAACGTGAAATCTAACTCTCTATCAATTTAAGAAATCATTACTGTTATTTGTTCAGCATAACATTTTTATCCGTTGCAAAAGCTTTAGTTCTCTTATTAGGACTGACAGGAATAAGTAATCTATAGGCATCAGAGAGTTATTTTTAAGATTAATTTTCTTTTTCAGGTTGAGAAGCTAAAACAGCTTCCGCTCACTAAACCGCTAGAGTTCACATTTACTGGCATGATCTTAGCCTCTTTTGATGGTGGATATATCTCAGAATGCATCTCAATATTTGAGTCAATGGAAGGGCACTGTGCACCAAATATTGGTACAATAAATGTCATGATAAAAGTGTATGGACGCTGTGATATGTTTGTGAAAGCAAGGGACTTATTTGAGACCATCAAAGTTAATTTGCCTAGTTCAAATCATTCATCACATAAAGCAGACGCATATACATACAGCTCTATGCTTGAAGCAGCTGCATCTGCCCAACAGTGGGAATACTTTGAAAATGTGTATAGAGAGATGACTCTCTCTCAGTACCACCTAGATCAAAGCAAATATTCATGGATGCTCATCAAGGCATCCAAAGCTGGAAAGGTAATGTTTATTATCAGCAATCTGAACATTCATTTTCGGTTACCCTGAGATGTTTGGTTCCCCTCTCAAAACGAATTGTCTGTATTTTAATTAATCTGCTCTAGGATAGTTATGCTAACGTAGCACTACACTTTATTTAAGGTAAAGTTTTGTTCAATGTACAGCATGGAAATCTTACATTACATTATGTGATATCTGATTAGTATAGTTTGGGTCCACCAATCAGTCCACTTGAAGGTCCTTTGGACTTGGAGGTGCTATGAAATTACTATCTTCCTTTCTATGCCAGTTAGTGTGAATTTCTCCCCTAGAACGATATTACCACACCTCCTATTCAACCTTATTGTGAAGTTCCCCTAGAACAATATTACTGTACCTCCTATTCAACCTTATTGTCTTAAATTTTGTCATCAGGTTTTCTTTCATGCTATTGTACTCATTTTTAGTTTAGGTGGACTTCTTTTTTACTTGTTCTACTGAACGAGGGAGGGACATTCTGAATGCTTAAAGTTCCTTTTTTCAATCATCATGAAATGCTCTTTTATGAAGGTGACCAGGTGCATGAATAATTTACTCCCTGATTTGTATGCAGTCATATTTGCTGGAACATGCACTTGATTCAATACTTGAAAGAGGAGAGACCCCCAATGTACAGTTATTTAGTGAGATGATATGCCAAACTATTGCTCAAAGAAACTATGCAAAGACACTTCATCTAATAAATATTATGGCTGAGGCTTCAACTGATGTCAGTGAACTTCAGTGGAGCAAGCTACTTGAGCAAAATATGCATCGATTCAGCGTGAATGCTTTGAAAGATCTTTTAAAGTACCTCAGTACCAGTGATATCATCAAATCGGATCCCGAACTTTGTTTTGTAAGTGCACTGCAATCTCAATGTGGGACAACTTTTGTGAACGACACTTCTTTTGTGGCTGATGGTACATATACTGGACAGTCTCAACTCTCTCTGCCAGAGAATATAACCAAGTCTTCAAATAGCAATCTAGATCAGCTTTCTTGCATGAATTCGCTAAACACAAATGTATTTCCCGATGAGAAAGTTAGCAGTGAGTTCTCTGATTACATTATGAATACTCCACAATCTGATGCTAATGCTGGCTTGAGCGAGGACATTGTTATAGGTTCACATTTTGAGAGTGAACAGAAAGAACAACATGATCTCGGCTGGTTGGGGACAGGAGTATCTGCAGTTGACGAAGTACTTGATTCAATGAATTTGTATGGTGATGGTTCATGCGGAGAGATGCCGTCAGCATCAGAAATTCTTGAATTATGGGAGCAGGATAGGATAAATGGGACGTTTTCTGCTAAAACGGCTGAACCACCATGTGAGGATAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018316