BGIOSGA018319

From RiceWiki
Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018319| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018319, complete gene.| tag = OsI_194...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018319

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018319, complete gene.

LocusTag

OsI_19424

Ensembl Transcript ID

BGIOSGA018319-TA

Ensembl Protein ID

BGIOSGA018319-PA

Length

4017

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15392639..15396655

Sequence Coding Region

15394195..15396655,15393981..15394010,15393256..15393377,15393066..15393165,15392908..15392942
,15392639..15392818

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15392639..15396655 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15392639..15396655 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCTCCGCCGCCTAGCCCGTTCCCCCTCGTCGCGCTCTCTCTGCGCCCCGCGCTCCTTCTCCTTCTCCACCTCCGCCTCTCCGCCTCCGCGCGCTCCCGTGCCCGCATCCCCTTCCTACCTCGCCCACCACCTGCTCGACGAATTCTCCCGCCCGCGCGCCACCCGCGACGCGGCGCGCCTCCGCCGGCTCGCCGCCGAGCTCACCGCCCCCGCCGCGGAGTCCGTCCTCCTCCGGCTCCCGTCCTGGCGCCACGCCCTCGACTTCTTCCGCTGGGCCGCCGACCAGCCGGGCTTCCGCCACTCCTGCTACTCGCTCAACGCCATGGCCTCCCTCCTCCCCCGCCACCAGCGCGCGCATCTCGACCGCCTCGCCGCCGACGCGATCTCCGCGCGCTGCCTCATGACGCCAGGCGCGCTCGGGTTCCTCCTCCGCTGCCTCGGCGCCGCGGGGCTGCCCGACACCGCCGTCCGCGCCTTCGACGCCGCGAGGGCCTCCTTCGGTTGCACCCCCAACTCGTACACCTACAACTGCCTCCTCGACGCGCTCGCCAAGGCCGGCCGCGCGGACGATGCCCAGGCAAGGCTCCGGGAGATGGTGGCGAGGTGCGGCGACGGGAGCGTTGATAAGTACACGCTCACCTCACTCCTGCGGTGCTACTGCAATGCAGGTCGTCCTGATGACGCCAACGACGTGTTCCAAAGGATGAGCGAGCTGGGGTGGGTGGACGAGCATGTGCTTACGACGCTGATGGTGGCGTTCAGCAAGTGGGGGAAGGTGGACGGTGCGGTTGAGCTGCTAGGGAGCATGGAAGCACTGGGGATGAGGTTGAGTGAGAAGACATTGAGCGTGCTTGTCCACGGGTTCACCAAGCAAGGCAGGGTTGACAAGGCCATGGACATGTTTGCCAAGATGGTCAGTTACGGGTTTGTTGTCGATTTGGCAATGTACAGCGTTTTAATTGAGGGGCTCTGTCAGCAGAAGGACATTGCGAGAGCAGTGAAGTTGTTCAAGGAAATGAAGAGCAGTGGAGTTGCTCCTGACGTCCGCTTACTCAAGAAGGTGATCGAGGCTTTTTGTAGAGAAGGGGATTTTGCCGTTATTGGTCCGTTCATTAATGAGAATGCAGAGTATTTGAAATCCGGCAGTGTTGTCCCACTATACAATGTAGTTTTAGAAGAGCTTGTCCATTGTGGTGAGGTAGAAGCAGCTTATCAGTTGCTCCGCTCCATGGTATGTGGTGGTCAAGCGGTTAACAATGATGTGGCTGGTGGTGCACATATGTTGCATATCCGTGAAGATGCTAAACCAAATTCTGATTCCTTTAACATTGTTGTCTGTGGCCTATGTAAGGTTAAGAAGCTGGATATGGCCTTAGCTCTCACAAAAGACATGATTAGCCTTGGTTGTAAGGGCAAGATTTTGATGTTTAATGATTTGATCCATGAGTTGTGCAATATGGATCGGTTAGAAGAAGGATATGGGATATTTAACCAAATGAAGGACCTTGGTTTGACACCCTCAGAGTTCACATATAATTCATTGTTCTATGGCATTTGTAGGAGAAAATATCCAAAGGCTGCTCTGGATTTACTAAGGGAGATGCAGACAAATGGGCATCCCCCATGGATAAAGAACTGCACGGAGATGGTGCAACAGCTTTGCTTCAGTGGCAGAGTAACAGAAGCAGTGCAATTTTTAGATGGAATGCTTCAAATTGGTTTTCTTCCTGACATTGTCACATACTCTGCAGCCATGAATGGAATGTGTAACACTGGAGAGGTGGACGATGCGTTACACCTCTTCCGTGACATTTCCTGTAAGTATTATCTTCCTGATGTGGTAGCACATAATATCTTGATAAATGGGTTTCGAAAATCAAGTAAATTGGATGAAGCACAAAAAATTATGGAAGAGATGTTAGAGAAGGGTCTGTTTCCTTCTGTTGTTACCTACAACCTTATGATTGATGTTTGTTGCAAGACTGGCAGGATTGAGAAAGCAATTTCTTACTTAGATAAAATGGTTTATGAAGAAAAGCAACCAACAGTAATTACATATACAAGTTTGATAGATGGATTCTGCAGTGCTGGAAGACCTGATGAAGCCATTAAGTTGTGGTGCGAAATGAGGGAGAAAGGTTGTGCTCCAAACAATATAGCATATACTGCTTTTATAAACGGGTTGCGCAAATGTGGCCGAATAGAGACTGCACTAACCTACTTTGAAGAGATGGTGACAAAAGGTTTTGAGTTGGATACTTTTTCCCTCTTATATTTTATAAACTTTTTGATATCAAATGGACATCCCATGAAGGGATGTGAGCTTTTAAAAGAGGTTCTCCAAAAAGATACCTACGGCAATAATTTGAAAATGGTAGGATTAATAAATGAAGCAGTTGTGGAGCTGTCGAAAGATGGAATAACTTCCTCAGATATCCTGAAATTTGTAGATAAAGCTTATACTGGTGTCAACTCTGTGGTGCCAGGTAATCTACTACAAATACTGGAAGGGCTTGAGGCAAGAGGAAATTGGAGGTGGGCTTTATCTGTTACTGAGTGGGTATACAAGGAGAACATTTACGAGCATGGAAAAAGCAGGTATATTTGTGATTTCTTACAGGAGCTGTCAGAGAATGATGAGAAAATCAAGTCCTTAGTCAGCATGGGTTTTCCAGAAGATGAAGCAAAGATGGCTATTACTAGATGTGGAAATGTTTACTCTGCAAACCTATCTGACTATGAGGATGCAGAGTTCAGTTCCTTTGGAGGAAGAAAGAATACAAGATTCATGGATGGAAGCAAGAAAAAGAGTGGTATGGAAGTGGGCCACAAGGGAATCAAATGCCATTTGGTGACAGCCATGAAGAGCCAATGCCTCTGCCAAATCCTATGGTGGATTGGTGGGATTCAGCTTGCCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSLRRLARSPSSRSLCAPRSFSFSTSASPPPRAPVPASPSYLAHHLLDEFSRPRATRDAARLRRLAAELTAPAAESVLLRLPSWRHALDFFRWAADQPGFRHSCYSLNAMASLLPRHQRAHLDRLAADAISARCLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQRMSELGWVDEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGHPMKGCELLKEVLQKDTYGNNLKMVGLINEAVVELSKDGITSSDILKFVDKAYTGVNSVVPGNLLQILEGLEARGNWRWALSVTEWVYKENIYEHGKSRYICDFLQELSENDEKIKSLVSMGFPEDEAKMAITRCGNVYSANLSDYEDAEFSSFGGRKNTRFMDGSKKKSGMEVGHKGIKCHLVTAMKSQCLCQILWWIGGIQLAQ</aaseq>

Gene Sequence

<dnaseqindica>1..2461#2646..2675#3279..3400#3491..3590#3714..3748#3838..4017#ATGTCGCTCCGCCGCCTAGCCCGTTCCCCCTCGTCGCGCTCTCTCTGCGCCCCGCGCTCCTTCTCCTTCTCCACCTCCGCCTCTCCGCCTCCGCGCGCTCCCGTGCCCGCATCCCCTTCCTACCTCGCCCACCACCTGCTCGACGAATTCTCCCGCCCGCGCGCCACCCGCGACGCGGCGCGCCTCCGCCGGCTCGCCGCCGAGCTCACCGCCCCCGCCGCGGAGTCCGTCCTCCTCCGGCTCCCGTCCTGGCGCCACGCCCTCGACTTCTTCCGCTGGGCCGCCGACCAGCCGGGCTTCCGCCACTCCTGCTACTCGCTCAACGCCATGGCCTCCCTCCTCCCCCGCCACCAGCGCGCGCATCTCGACCGCCTCGCCGCCGACGCGATCTCCGCGCGCTGCCTCATGACGCCAGGCGCGCTCGGGTTCCTCCTCCGCTGCCTCGGCGCCGCGGGGCTGCCCGACACCGCCGTCCGCGCCTTCGACGCCGCGAGGGCCTCCTTCGGTTGCACCCCCAACTCGTACACCTACAACTGCCTCCTCGACGCGCTCGCCAAGGCCGGCCGCGCGGACGATGCCCAGGCAAGGCTCCGGGAGATGGTGGCGAGGTGCGGCGACGGGAGCGTTGATAAGTACACGCTCACCTCACTCCTGCGGTGCTACTGCAATGCAGGTCGTCCTGATGACGCCAACGACGTGTTCCAAAGGATGAGCGAGCTGGGGTGGGTGGACGAGCATGTGCTTACGACGCTGATGGTGGCGTTCAGCAAGTGGGGGAAGGTGGACGGTGCGGTTGAGCTGCTAGGGAGCATGGAAGCACTGGGGATGAGGTTGAGTGAGAAGACATTGAGCGTGCTTGTCCACGGGTTCACCAAGCAAGGCAGGGTTGACAAGGCCATGGACATGTTTGCCAAGATGGTCAGTTACGGGTTTGTTGTCGATTTGGCAATGTACAGCGTTTTAATTGAGGGGCTCTGTCAGCAGAAGGACATTGCGAGAGCAGTGAAGTTGTTCAAGGAAATGAAGAGCAGTGGAGTTGCTCCTGACGTCCGCTTACTCAAGAAGGTGATCGAGGCTTTTTGTAGAGAAGGGGATTTTGCCGTTATTGGTCCGTTCATTAATGAGAATGCAGAGTATTTGAAATCCGGCAGTGTTGTCCCACTATACAATGTAGTTTTAGAAGAGCTTGTCCATTGTGGTGAGGTAGAAGCAGCTTATCAGTTGCTCCGCTCCATGGTATGTGGTGGTCAAGCGGTTAACAATGATGTGGCTGGTGGTGCACATATGTTGCATATCCGTGAAGATGCTAAACCAAATTCTGATTCCTTTAACATTGTTGTCTGTGGCCTATGTAAGGTTAAGAAGCTGGATATGGCCTTAGCTCTCACAAAAGACATGATTAGCCTTGGTTGTAAGGGCAAGATTTTGATGTTTAATGATTTGATCCATGAGTTGTGCAATATGGATCGGTTAGAAGAAGGATATGGGATATTTAACCAAATGAAGGACCTTGGTTTGACACCCTCAGAGTTCACATATAATTCATTGTTCTATGGCATTTGTAGGAGAAAATATCCAAAGGCTGCTCTGGATTTACTAAGGGAGATGCAGACAAATGGGCATCCCCCATGGATAAAGAACTGCACGGAGATGGTGCAACAGCTTTGCTTCAGTGGCAGAGTAACAGAAGCAGTGCAATTTTTAGATGGAATGCTTCAAATTGGTTTTCTTCCTGACATTGTCACATACTCTGCAGCCATGAATGGAATGTGTAACACTGGAGAGGTGGACGATGCGTTACACCTCTTCCGTGACATTTCCTGTAAGTATTATCTTCCTGATGTGGTAGCACATAATATCTTGATAAATGGGTTTCGAAAATCAAGTAAATTGGATGAAGCACAAAAAATTATGGAAGAGATGTTAGAGAAGGGTCTGTTTCCTTCTGTTGTTACCTACAACCTTATGATTGATGTTTGTTGCAAGACTGGCAGGATTGAGAAAGCAATTTCTTACTTAGATAAAATGGTTTATGAAGAAAAGCAACCAACAGTAATTACATATACAAGTTTGATAGATGGATTCTGCAGTGCTGGAAGACCTGATGAAGCCATTAAGTTGTGGTGCGAAATGAGGGAGAAAGGTTGTGCTCCAAACAATATAGCATATACTGCTTTTATAAACGGGTTGCGCAAATGTGGCCGAATAGAGACTGCACTAACCTACTTTGAAGAGATGGTGACAAAAGGTTTTGAGTTGGATACTTTTTCCCTCTTATATTTTATAAACTTTTTGATATCAAATGGACATCCCATGAAGGGATGTGAGCTTTTAAAAGAGGTTCTCCAAAAAGATACCTACGGCAATAATTTGAAAATGGTAGGATTAATAAATGAAGCAGTTGTGGAGCTGTCGAAAGATGGAATAACTTCCTCAGATATCCTGAAATTTGTAGATAAAGGTTTAGTTTCAGTTCTCAAACTTTGGACACAAGATGGAGACAAATGATAACGGTTACTAGCATAAGTCAAGTCTTTGTTTGTAGCCAGCATATACTGGTCTCAACTCTGTGGTGCCAGGCTCTGTAGATTGTTCATTGCTTCTGTCTACATGTCCTTCTGCTTCGTGCAACTACTTTCCTGCAGCTTATACTGGTGTCAACTCTGTGGTGCCAGGTATGTTCGTGCTACTGCTTTTTCTGGCATTCTTGGCCTTTGTCCTGCTTTCAAGTAGGAGTACAAAGTAGTGCTGGTTGCTTTATGACTTAAATAATCACATTTTCATGAATATGAGATATGGTAGAATTTGCGTAGACTTAGCATGGATTGTTTCTGACTGGTATACACATGTTCCTTTCACCATTGAGACAGCAGTGTATTTTTTCGAGGAAGGAGGCAGGAGTTCTGCCATTCACTATTAGTAGAAAAGAAAGGTCTTATTTTTTAGAAAGCCTGGATATTTTACCATTGAGACAGCAGTGTAGTATGCACCTATATGCGGTTATGCACTTAACTTCATTGTAAACTTCACTTATCCTAAATCCTAGTGCTATTATCGAATTAAGTTTTTCTTATTGATTAAATAATTAGTCTGGGGACTGAGGTTTCTCCTCTTAATCTATGCTAAGACACATTTGAACCTGCATGAAGTGTTGCATTTTTTTTCCCCATATTGCATAAGAATGTTTGCCTGTCAGACTGAACTAATATGATCTAAGTTTACATGATTGGAGGCTTACTAGATTGATGAAAAAAAATCTGACCTAATTTATAGTGAAGGTAATCTACTACAAATACTGGAAGGGCTTGAGGCAAGAGGAAATTGGAGGTGGGCTTTATCTGTTACTGAGTGGGTATACAAGGAGAACATTTACGAGCATGGAAAAAGCAGGTATATTTGTGTGAGTACTACTTTTTGTTATTCCAAACTGCAAGTCATCTGTGAGATTTAGCAAATGTTTTCAATCTGCCTTTCATGTGCTTTTATGCAGGATTTCTTACAGGAGCTGTCAGAGAATGATGAGAAAATCAAGTCCTTAGTCAGCATGGGTTTTCCAGAAGATGAAGCAAAGATGGCTATTACTAGATGTGGTATGCCTCTTGAATTTGCTGCTTTCACAGGAAGGGACCTTATACTGCCTACGTTGGGTAAAATTTCGCAGGTTTCAATGCATATGTAGATATGTTGGCTGATTCAATATTATCTGGCTGCAGGAAATGTTTACTCTGCAAACCTATCTGACTATGAGGTACCTTGTGATTATAATGCATCCGAATCAAGAAATTGTTTCATTTCTTTAAATGTAATGGCACTAGCATCATGTTTATAATTTTGCAGGATGCAGAGTTCAGTTCCTTTGGAGGAAGAAAGAATACAAGATTCATGGATGGAAGCAAGAAAAAGAGTGGTATGGAAGTGGGCCACAAGGGAATCAAATGCCATTTGGTGACAGCCATGAAGAGCCAATGCCTCTGCCAAATCCTATGGTGGATTGGTGGGATTCAGCTTGCCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018319