BGIOSGA018329

From RiceWiki
Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018329| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018329, complete gene.| tag = OsI_193...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018329

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018329, complete gene.

LocusTag

OsI_19399

Ensembl Transcript ID

BGIOSGA018329-TA

Ensembl Protein ID

BGIOSGA018329-PA

Length

6254

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14916900..14923153

Sequence Coding Region

14923069..14923153,14922497..14922756,14920690..14921739,14919974..14920187,14919309..14919832
,14917692..14917794,14917021..14917103,14916900..14916944

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14916900..14923153 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14916900..14923153 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAAAAAAAGTGCTCCCACACCCCTTCCGCCGGAGACCGCCAACACCTCGCCCGCTCCCATCGGCGCCACCGCCGGAATCCGGGTTGAGAACTGCTACGTCTTCAAGAGCCGGCTGCAAGAGTATGCGCAGAAAGCCGGCCTCCAGACTCCAGAGTATCATACCTCCAAGGAGGGACCTTCCCATGAGCCTGTCTTCAAGTCCACAGTGGTGATTAATAACACCAGCTATGGCTCCCTGCCCGGATTCTCCAACAGAAAGGCTGCAGAACAGTCTGCTGCTGAAGTTGCCCTCATGGAAATTGTCAAGTCCATACCAGCCAACGCAAACATCCCAGCTGTTCAAGAGACTGGCTTGTGCAACATAGGAAGTCAGCAACTAAACCAGAGGGAAATGCACCGAGAAGCTGACCACCACCACTGCCTTCTGGCAACCCTTGCACGTCACCGCCGTCTTGCTGCCGCTGCCACCCTCTTCTCCTCCACTCTCCGCACTGCTCGCGCCCTCAACTCCCTCCTCGCTGCTATCTGCTCTTCCCCGGCGTTCCTCCGCTTCGCCCCCAAAGTCCTCCTGCTTGCTGCCCCGTCAGTCTCCCCTAACGCCACCAGCTTCCACATCCTCACCTCCACGCTCTGCCAGGCCCACCGCCCCACCGCTGCCGCCGACCTCCTTTGCTGCATGCCCTCGCTTCTACTTGACCCTGACCCGGCCAGTTGTCGTGCTGTCCTTTCCTCCCTGTGCCAGTATGCTTCCGCTCAGGATGCAGTAGCATTCTTGGACAAGATGTGCCATTGGGGCATTTCCCCAAGCAGATCTGACTACCATGCCGTCTTCGACGCACTTCTGCAGGAGGGAAAGGTAGCGGAGGCATATGAGGTCATGAAGAATAAGATGGGATCTAACGGTGTGGCACCTGCACTTGCGTACTTCAAGTTAATAATGCAAGCTTTCAGTGAGACCGCGGAGTTCGATTCTGTGGAGGAGGGGTTCGATGAAATGCTCCTGAGAGGGCTGGTGCCGGACGTGGATGTGTACAATGTGTACATCAGTGCGCTATGCAGGAAAGGTGACCTTGCTGGAGCACGGCGGATGATGACCTGCATGGAGCACGCCGGGTGCCCACCGGATATAAGGACATTTGGCGTGGTAGTCTCCGGGTGCATGTCTGCTGGGGACATGGGCACAGTGAGGGAGTTGGTGCAGGAGGCAATAAGGCGTGGCCTGCGGTGGGATCCAACGGCATTGTCGGAGCTGATAGGCCTGCGGCAGGCAGGTGGTGGTGCCACACAGGCACATGAGTTACTGTTGGAGCCACTATTTGTGCACGATGCACTAGTGTTGGGGCAGCTGATTGGAGCATTGTGCAAGCAAGGGCTATTGGGACCTGCTGCTCAAGAGACTGGGCTGTGCAAGAATCTTCTTCAGGAGTATGCACAGAAGATGAATTATGCCATTCCATCTTATATTTGCACCAAACCAGCCTCAGGCTTGGCTCCTTTCATATGCACTGTAGAGATTGGTGGAATACAATATATTGGTGCTGCAGCCAGAACAAAGAAAGATGCAGAGATAAAAGCTGCCCGAACTGCTCTTCTGGCAATCCAAGGTCAATCAGAGGGTTCTGCAAATGGTGCGACAAAATATATCGTAGTTCCTGGTAAAAGGGTAGGTAAGGAGGTAGAAAAAAGGCCAATTGAAACCCCCAAACCACTTAAAGCAAAGAAAGGTGGTTTCAAGAAGAAATGGAACAAGAGGAAATTCATGAAGAAGGATGGTCAAGCTGTTGATGTTGAAAAGGATGAAGCTAGAGTGGCTGGAGATGCTCATGATTCTGATGTCCTAATGCAGCCAACGGTAATAACACAGGAGGCATCTTGTGGCACTTTGTTCCTGCAACCTTGTGAGGAAGCTAAAAGAGTAGAAGATGAGCCACCTAGAGATATTGAAATGGTACAACCTGATAAGGAGAACCAACACAGTGACGCTGCATTGGTGCAACCTGATGATGAAGCTAGAGTAGAACAGGAGCCATCCAGAGATATTTCAGTGGTGCAACCTAATGAGGAAGCTATAAGTGCTAAGCAGGAACCATCCATCGATGCTGCAACCCTGCAACCTAAAGAGGAAGCTATGAAAACTGGCTGTGTGGCACTTGTCTTGTGTTTAAACATTAGTGTTGATCCGCCGGATGTGATCAAAATCTCCCCTTGTGTAAGAAAGGAGTGCTGGATAGATCCATTTTCTATGGCAGCTCCAAAAGCCCTTGAAACTATTGGGAAAACATTACACTCACAATATGAGCGCTGGCAGCCAAAGGCTCGTTACAAGCTTCAGCTGGATCCGACATTAGAGGAAGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MKKKSAPTPLPPETANTSPAPIGATAGIRVENCYVFKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINNTSYGSLPGFSNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCNIGSQQLNQREMHREADHHHCLLATLARHRRLAAAATLFSSTLRTARALNSLLAAICSSPAFLRFAPKVLLLAAPSVSPNATSFHILTSTLCQAHRPTAAADLLCCMPSLLLDPDPASCRAVLSSLCQYASAQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGKVAEAYEVMKNKMGSNGVAPALAYFKLIMQAFSETAEFDSVEEGFDEMLLRGLVPDVDVYNVYISALCRKGDLAGARRMMTCMEHAGCPPDIRTFGVVVSGCMSAGDMGTVRELVQEAIRRGLRWDPTALSELIGLRQAGGGATQAHELLLEPLFVHDALVLGQLIGALCKQGLLGPAAQETGLCKNLLQEYAQKMNYAIPSYICTKPASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVPGKRVGKEVEKRPIETPKPLKAKKGGFKKKWNKRKFMKKDGQAVDVEKDEARVAGDAHDSDVLMQPTVITQEASCGTLFLQPCEEAKRVEDEPPRDIEMVQPDKENQHSDAALVQPDDEARVEQEPSRDISVVQPNEEAISAKQEPSIDAATLQPKEEAMKTGCVALVLCLNISVDPPDVIKISPCVRKECWIDPFSMAAPKALETIGKTLHSQYERWQPKARYKLQLDPTLEEV</aaseq>

Gene Sequence

<dnaseqindica>1..85#398..657#1415..2464#2967..3180#3322..3845#5360..5462#6051..6133#6210..6254#ATGAAGAAAAAAAGTGCTCCCACACCCCTTCCGCCGGAGACCGCCAACACCTCGCCCGCTCCCATCGGCGCCACCGCCGGAATCCGTATGTTTCTCTCTCCCCTTTTCTCCCCTCCCGCCCTCTCACTCTCAGGACTCTTCTTTGGTCTGAACAAGAACCATGGACTGTTCATTCCAGCGCGCTAACCACAGGTTTTGGTTCCTCTCCACTTTTTAAATGGAGATTGCTTAACGTATTTACTTTACTGGAGAGCATTCACCATCATACATGATGCATTGATGCGCCTGGGATATAGCTAATTACTACTTCTACTACATTTGTTGCCAAAACATTACTTGCATTATGCCATCTTGGTAATGCTATTTTCTGAGTTATGGTTTGCTTGATTTGGCCCAGGGGTTGAGAACTGCTACGTCTTCAAGAGCCGGCTGCAAGAGTATGCGCAGAAAGCCGGCCTCCAGACTCCAGAGTATCATACCTCCAAGGAGGGACCTTCCCATGAGCCTGTCTTCAAGTCCACAGTGGTGATTAATAACACCAGCTATGGCTCCCTGCCCGGATTCTCCAACAGAAAGGCTGCAGAACAGTCTGCTGCTGAAGTTGCCCTCATGGAAATTGTCAAGTCCATACCAGCCAACGCAAACATCCCAGCTGTTGTAAGTCACTCTCTGCTCTACTTGTGTTCTCTTTTGTTTAACTCTCAACACGATGGAATACCTGGGGCCTGTGGGACCTGCTAGTGTAGTACAAGATAAGTAAAAGTGTTGGGATAGTCAACTTATTTCAATAAAATCCCTGCTTTTCAATTTGCGCGAATCTGAAGAATGAGATAGTCACTCAGCTGATTACTCCAGAACGAATCAGGGCTTTCGAGTTTGGATAGAGTTAGGTCCTAGAGAGCAAGAAGAGGCTGGTATTTTCATAGAAGGGATTGTGAAAGCTTTGCTGTCAGTCAGCACGGTCTTATTGTTGTCTACCATCATGATTTGTTCGTATCTTTTCAAGCTCATAATTCTACTAAAGTATTGTATGAATATGACCAGAAATTGGTTGTTAAAGAGCTTCCAAACTCAAGCTTCCCCCGTTTGTGAACCATGAACAATTCAAACATCAAAGTACACGTATTAAGTTTTGTAGTCCTTTCCAAGGCCAAGACTTAGATAAATTGGATGCGCTTTTAGTTTTGAGTCCTTTGGAAATAGCCTGATTGAGAAACGCCCAGGGGTCTTCTGGCTAACTCCACAAAGTGGTGGGCTAGCCGGCCTGGGTTCGAAGCCTCACCCCTTCTATTTATTTGATATTAGGTCCTTCCCTAATATTCACGTTTTTGAATTAGCCTGACTAAATTAGCAAAGTGTTATAATCTCTTACCTGGATTTCTATGTTCTTAATGCATCTTAATATGTTTTCCAGCAAGAGACTGGCTTGTGCAACATAGGAAGTCAGCAACTAAACCAGAGGGAAATGCACCGAGAAGCTGACCACCACCACTGCCTTCTGGCAACCCTTGCACGTCACCGCCGTCTTGCTGCCGCTGCCACCCTCTTCTCCTCCACTCTCCGCACTGCTCGCGCCCTCAACTCCCTCCTCGCTGCTATCTGCTCTTCCCCGGCGTTCCTCCGCTTCGCCCCCAAAGTCCTCCTGCTTGCTGCCCCGTCAGTCTCCCCTAACGCCACCAGCTTCCACATCCTCACCTCCACGCTCTGCCAGGCCCACCGCCCCACCGCTGCCGCCGACCTCCTTTGCTGCATGCCCTCGCTTCTACTTGACCCTGACCCGGCCAGTTGTCGTGCTGTCCTTTCCTCCCTGTGCCAGTATGCTTCCGCTCAGGATGCAGTAGCATTCTTGGACAAGATGTGCCATTGGGGCATTTCCCCAAGCAGATCTGACTACCATGCCGTCTTCGACGCACTTCTGCAGGAGGGAAAGGTAGCGGAGGCATATGAGGTCATGAAGAATAAGATGGGATCTAACGGTGTGGCACCTGCACTTGCGTACTTCAAGTTAATAATGCAAGCTTTCAGTGAGACCGCGGAGTTCGATTCTGTGGAGGAGGGGTTCGATGAAATGCTCCTGAGAGGGCTGGTGCCGGACGTGGATGTGTACAATGTGTACATCAGTGCGCTATGCAGGAAAGGTGACCTTGCTGGAGCACGGCGGATGATGACCTGCATGGAGCACGCCGGGTGCCCACCGGATATAAGGACATTTGGCGTGGTAGTCTCCGGGTGCATGTCTGCTGGGGACATGGGCACAGTGAGGGAGTTGGTGCAGGAGGCAATAAGGCGTGGCCTGCGGTGGGATCCAACGGCATTGTCGGAGCTGATAGGCCTGCGGCAGGCAGGTGGTGGTGCCACACAGGCACATGAGTTACTGTTGGAGCCACTATTTGTGCACGATGCACTAGTGTTGGGGCAGCTGATTGGAGCATTGTGCAAGCAAGGGCTATTGGGACCTGCTGCTGTAATAGATAATTATTAGAAAGCATTGGAATGGTCTTTTTGTTTCATACAGTTATTGGTCTTGAATTCTCGGAAATCTGAAGAACGGCATAAGAATCATAAAAACAGAGACAGAAAAGGCAAACCATGGACTATAACTCCAGGAATACTTGGAGCTTTCGGGTTTGTAGATCACTAGATTGTTGGCTATAGTTAGGACCCAGTGAGCAAGAAGGGAGCGTATTTGTATAGATGGGCCAGGTAGGAGGAGATTGCAGACAGTCTTTATTGTTGTCTTCTGTCATGATTTATTTGTATTTTCTCAAGCTCACAACTCTACTAAGTTATTCCCATGAATACAATAGGAAATTAGTCGTTTAATAGCTACTGAACTCATACTGCCAGGCTTTAGATAATTCGGATGTTCTTTAGTCCTTAGGAATCAGGCTGACTAAAATTAGCAGTGTTATTATCTCTTTCCTGGATCACTGTGCATTTTTTTACACATATTAATATGTTTTCAGCAAGAGACTGGGCTGTGCAAGAATCTTCTTCAGGAGTATGCACAGAAGATGAATTATGCCATTCCATCTTATATTTGCACCAAACCAGCCTCAGGCTTGGCTCCTTTCATATGCACTGTAGAGATTGGTGGAATACAATATATTGGTGCTGCAGCCAGAACAAAGAAAGATGCAGAGATAAAAGCTGCCCGAACTGCTCTTCTGGCAATCCAAGGTATTGTGCTGTTCTTCTCTAAGGGTCTTTTTTTTTAATCTTATCCAGGCTATTCACTGTTGAAATTAATATTGCTATGTTCTTTTTTTGTTTGTTTATGTGGAACATTGGGTCATGCATGGGGCATTTGCTTTGGTGCAGGTCAATCAGAGGGTTCTGCAAATGGTGCGACAAAATATATCGTAGTTCCTGGTAAAAGGGTAGGTAAGGAGGTAGAAAAAAGGCCAATTGAAACCCCCAAACCACTTAAAGCAAAGAAAGGTGGTTTCAAGAAGAAATGGAACAAGAGGAAATTCATGAAGAAGGATGGTCAAGCTGTTGATGTTGAAAAGGATGAAGCTAGAGTGGCTGGAGATGCTCATGATTCTGATGTCCTAATGCAGCCAACGGTAATAACACAGGAGGCATCTTGTGGCACTTTGTTCCTGCAACCTTGTGAGGAAGCTAAAAGAGTAGAAGATGAGCCACCTAGAGATATTGAAATGGTACAACCTGATAAGGAGAACCAACACAGTGACGCTGCATTGGTGCAACCTGATGATGAAGCTAGAGTAGAACAGGAGCCATCCAGAGATATTTCAGTGGTGCAACCTAATGAGGAAGCTATAAGTGCTAAGCAGGAACCATCCATCGATGCTGCAACCCTGCAACCTAAAGAGGAAGCTGTAAGTGTAAAGCCAGAAGGTTTTAGTTTATCAACACCTGAGGTAGCCTGAACAAATAGAACATGAAAATTAGGGGCAGCTATTGATTGGGTTAAGAGGGTGGCGTACTAGTAAATATCTTTTATCCATTTTGTTCCACATATTATTGTTACTAATTTGATTGATTATGACGACACTTTCAGTTGTAATTGGGGTTCTCAAGTCATGCAATGGTTGATGTTACCATATCTAGTAGTGCTATGTAAGCAGGACACTCAACTTTATCAACGAGGGGCTCAGGTGCGGGGCTAAAAAATGCGTCATTTTATTGAATTTATCATATGTTAATCTATACAGATGGGGCATAGTAGTAGTGTTGCTATGTTGTTGCACCATTTTGCTGCATGGTTAAAAGCAGCATGGCGATCCCCGACTCTCGTATATGCATGTTTCAGATAATAAGTCCATCTCATCTTTCTTATCAGAGCCAGCCTGTTGTTGGGATGGTCCTTGAATCTTTAATCTAGTAGGGTGGATTTATCCAGGTGACAGTATTTGCTAATTACTGATTGGCAGTTTGGCACCATGTTGGCAGAGAGACTTAGTTTCAGGCGAGTTTGGCTCAGAAGTTAATAGAAAGAGAAACATAGTTTCAGGAGTTTGGCAGCGAAGTTAATAGAAAGAGAAAATATAGTTTCAGCCGAGGTTGGCGGGGAAGTTGATATGTGAAAATGGTGAGTGGGGGCAATGGACAAAACCAGCATTACGGTAGTATAGTCATAATATTACAGCTTTTGGTTATCCAAGGTAATGCTATCATTATAGGCATATCAGATTTCCACCCACATGTTGCTCTAGCATGTGAGCATGCGGTAGTTTAAGGGCTGTAATTCTGCAATGGAATTATGATGATGGATGGGAAGCAGTGCATACTGGAAACAAATGACAATTAGGAACCTTGAGACCCCATCTGGGATAGTTTTGTGAGTTGTAATTGCTTTCGGGCAAAACAAATCACTTGTACAATGCAGATGTTTGGTTGCCCCATATATCCTTTTGGACATCGTGGAAATGCTTGGTTCCAACAATAGAACACTCATGTTGAATAAACTATTTCTTTCCTCTTTAGGTGACTGATGTCCCTAGTGGGATTTGCATCTTATTTTTTATTTTTATTTATCTAGGGTGGACCATTGTGTTGAACTTTAGTAAACCAGTTTGTGGCATGTGCTTCATAAAAAAAAAAAAAGAGAATATTCTAAATTAATATGACATGATGGAGAGCCCATGTACCAATTAATTGTTCCATGGTTGTGGTCAGTTTTATCTAGAAGTAGCAGATCAGCAAATAGCTTTGCTTTTCAGATGACTGTCTACGTTGGTCAGAAATCTGTCCCAATACCTTTTCTTTTCTTCTGGATGCTTCTTTTGGATATTCTATACTTCTATTTGTATTTCTATTCTTTTTATTTTCTGGTGTACTGTTGGATGTTATTGCTTTTATGCTATTTACTAATAGTGTTTTGGTAGTGCAGATGAAAACTGGCTGTGTGGCACTTGTCTTGTGTTTAAACATTAGTGTTGATCCGCCGGATGTGATCAAAATCTCCCCTTGTGTAAGAAAGGAGTGCTGGATAGGTAAACATTTGGTCATATGTATATGCTTGAATTTTAGTCAGCTGAAAAATATACGTCTGCCTGCAGTTGACAGTTTTATTTCATGTTTATGGGATGCAACTCCAGTATTGTTGTATTTCTTCTCTCCACATGCAAATGTTAGTTAGAACTCATTTAAGCTATATCTTTTGTTGACTGCTCTAAATGCCAAACAAGGGTGATTATTTTGTAATCAGAGGTTATTGCAGCAAAGACTGGTCTGACACATGCTATTCTGTAAAATTACTGTTAATTTTCTGTTTGATTATAACCAAATGAGTATTAATTTTTCTGTGTTCTGTAGTTGATTATATGCATATAAAAACGTTGATCTGTGAAAGCTTGAGGATTGGTTGTGGAGGATTAAAATTTTTGGGTCTGCTTTATAAGATGCTGTACCTTTAAGTTGTGGAGGATAGGGACTTGATCAATAAAATTTATTATTTGTTGATTGTTCTAGAGTGAGAAAGCTTATCTAAAATAAACATGGTGATTCATCTTTGTGCTCCTAATGCATTTGTACAGTTGCTTTGAGTTTTTCTCATAGCTCTTTCATTTATTTATCTTCAGATCCATTTTCTATGGCAGCTCCAAAAGCCCTTGAAACTATTGGGAAAACATTACACTCACAATATGAGCGCTGGCAGCCAAAGGTGAGGCACTTCTTTTGCTGTTTATAGACTTTATTATGATGACATTACTTACGTCATGCCCGAATGATGCTTGCAGGCTCGTTACAAGCTTCAGCTGGATCCGACATTAGAGGAAGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018329