BGIOSGA018338

From RiceWiki
Revision as of 02:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018338| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018338, complete gene.| tag = OsI_193...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018338

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018338, complete gene.

LocusTag

OsI_19379

Ensembl Transcript ID

BGIOSGA018338-TA

Ensembl Protein ID

BGIOSGA018338-PA

Length

2289

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14681543..14683831

Sequence Coding Region

14683631..14683831,14683318..14683542,14682925..14683056,14681543..14682457

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14681543..14683831 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14681543..14683831 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGTCCGAGCATGTCGTCGAGCAGGACGTGGCCATGCTCCCAGCTGCCGTGGACGGCGAGCGCGAGGACAGGCCGAGCGACCGATACGTCGTCGCGGCACGCCGTGACGGTGAGGAGGACGGGCTGCGGCTCGCGGTCCCGGCAGGCGCGCTCGTGCCCCGGGTCACGTACCGTGTCTCCGGGTGGGTCGCCGTGCAGGCGAGTGTCGCCGGATCGACTGCGGCGCGGTTTGCACCGGAGTGGCCGGCGGCTGGGTGGAGATTAATTAATGGCACGTTCCGGCTCAACGAGACCCCGCGCGGCACGACGGCGGTGCACGTCCACGGGGCGCCCGCCGGGGTCGACGTGAAGGTGATGGACCTCCGCGTGTTCGCCGAGGACCGCAAGGCGCGGTTCAGGCAGCTCAAGGACAAGACCGACAAGGTTCGCAAGCGGGACGTCGTCCTCACGTTCGGCGTCGGAGCCGGAGTGGCGGCGAGCATCGTCGCCGGCGCGGCCGTCCGCGTGGTGCAGATGGACAACGTCTTCCCGCTTGGCACCTGCATCAACGGCTCATACTGGACGGAGGCGCAGCGCGGCCAGCTCAACTACCGCGACGCCGACGCGCTGCTCGACTTCTGCGACCGACACGGCAAGCCGGCTCGCGGCCACTGCATCTTCTGGGTCGTCGACGGAGACGTGCAGCAGTGGATCAAAGACCTCGGCCGCGATGACCTCGCCGCCGCGGTGCAGGGTCGCCTGAACGGCCTCCTGTCCCGCTACGCCGGCCGCTTCCCGCACTACGACGTCAACAACGAGATGCTGCACGGCCGCTTCTACCGCGACCGGCTCGGCGACGACGCCGCAGCGCTCATGTTCCGCGAGGCCGCGCGGCTGGACCTGGGCGCGCAGCTCTTTGTCAACGACTACAACGTCGAGTGCGCCAACGACCCCAACGCGACGCCCGAGAAGTACGTCGAGCTGGTCGACGCGCTACGGCGCGGTGGCGCGGCGGTGGGCGGCATCGGCATCCAGGGGCACGTCTCCAACCCATCCGGCGAGGTCATCTGCGACGCGCTCGACAAGCTCGCCACGACGGGGCTTCCCGTCTGGATCACCGAGCTGGACGTGGGCGAGCCCGACGTGTCCCTCCGCGCCGACGACCTGGAGGTGGTGCTCCACGAGGCGTACGCGCACCCGGCCGTGGCCGGCGTCGTGCTCTGGGGTTTCATGCAGGGCCGCATGTGGCGCCAGGACGCGTCCCTCGTCAACGCCGACGGCACCATCAACGAGGCCGGCCAGAGGCTGGTTGATCTCCGGAGGGAGTGGACGTCGGACGCGCGCGGGACCGTCGACGGCGACGGCAATTTCAGGTTCAGGGGCTACCACGGCACGTACGTCGTGCAGGTGACGACGGCGGCGGGGAAGACTCTCAAGACGTTCACCGTGGACAAAGGAGACACATCCCTCGTGGTGGATATGGCAAATTAA</cdnaseq>

Protein Sequence

<aaseq>MLSEHVVEQDVAMLPAAVDGEREDRPSDRYVVAARRDGEEDGLRLAVPAGALVPRVTYRVSGWVAVQASVAGSTAARFAPEWPAAGWRLINGTFRLNETPRGTTAVHVHGAPAGVDVKVMDLRVFAEDRKARFRQLKDKTDKVRKRDVVLTFGVGAGVAASIVAGAAVRVVQMDNVFPLGTCINGSYWTEAQRGQLNYRDADALLDFCDRHGKPARGHCIFWVVDGDVQQWIKDLGRDDLAAAVQGRLNGLLSRYAGRFPHYDVNNEMLHGRFYRDRLGDDAAALMFREAARLDLGAQLFVNDYNVECANDPNATPEKYVELVDALRRGGAAVGGIGIQGHVSNPSGEVICDALDKLATTGLPVWITELDVGEPDVSLRADDLEVVLHEAYAHPAVAGVVLWGFMQGRMWRQDASLVNADGTINEAGQRLVDLRREWTSDARGTVDGDGNFRFRGYHGTYVVQVTTAAGKTLKTFTVDKGDTSLVVDMAN</aaseq>

Gene Sequence

<dnaseqindica>1..201#290..514#776..907#1375..2289#ATGCTGTCCGAGCATGTCGTCGAGCAGGACGTGGCCATGCTCCCAGCTGCCGTGGACGGCGAGCGCGAGGACAGGCCGAGCGACCGATACGTCGTCGCGGCACGCCGTGACGGTGAGGAGGACGGGCTGCGGCTCGCGGTCCCGGCAGGCGCGCTCGTGCCCCGGGTCACGTACCGTGTCTCCGGGTGGGTCGCCGTGCAGGTGCAGGGCGGCGGTGACTGTGACGGCGACGGCGAGCGGAGCCACGTGGTGCGTGTCAGCCTCTGCTTGGACGATTGCGGCGTCGAAGGCGAGTGTCGCCGGATCGACTGCGGCGCGGTTTGCACCGGAGTGGCCGGCGGCTGGGTGGAGATTAATTAATGGCACGTTCCGGCTCAACGAGACCCCGCGCGGCACGACGGCGGTGCACGTCCACGGGGCGCCCGCCGGGGTCGACGTGAAGGTGATGGACCTCCGCGTGTTCGCCGAGGACCGCAAGGCGCGGTTCAGGCAGCTCAAGGACAAGACCGACAAGGTGAGATATCGTATCGATCGAGCGACGCACACAGCATCACTCGCTTTGCATGACCACATTCTGCTCCTATTTTCTAGGCAATTTGCCAATTCCGTAGGTAAATTGTCAAGCTATTTGGCCATTTTTGTCTGGGATTGCATGCATGCCTTCACTAGCGTGAACTGAAGTCCGCGGACCATTTTTTTTTTCTGCCACGACCATACTTGTCACGAGCGGATATGTAGATCGCGGCCACGACATTGACTCGTTCGACCATTTCAGGTTCGCAAGCGGGACGTCGTCCTCACGTTCGGCGTCGGAGCCGGAGTGGCGGCGAGCATCGTCGCCGGCGCGGCCGTCCGCGTGGTGCAGATGGACAACGTCTTCCCGCTTGGCACCTGCATCAACGGCTCAGTGATCCAGGACGAGGATGGATTCTAATCTCTCGGGTGGACGTCCACCCATTTCTTGCGTGTCATCTAAATGGTTATGTAAAAATTTCAAAAAAATTCCCCCGATAGGTTAATATGTAATATATCACTTCACAAACATGCAAGTTCAAATGCAACTTCTACAAATTGTAACAAAAATAACAAATCAAACTCTAACTAGTATACGTATTTTCACAGTCAAAGTGGGTTATTTTTGTTACAGTTGTAGAAGTCAAATTTGAACTTGCATGTTTGTGAAGTGATATATTATATATTTACATATCTTGTGAATTTTTTTGAAATTTTTTCATAACCATTTAGATGACATGCAAGAAACGGGTGGACGTCCACCCGAGTGTTTAAAACAGTTTCCCGATCCAGGACCCCAATTTCGTGGACTTCTTCACCAACAACTTCGACTGGGCCGTCTTCGAGAACGAGCTCAAGTAGTACTGGACGGAGGCGCAGCGCGGCCAGCTCAACTACCGCGACGCCGACGCGCTGCTCGACTTCTGCGACCGACACGGCAAGCCGGCTCGCGGCCACTGCATCTTCTGGGTCGTCGACGGAGACGTGCAGCAGTGGATCAAAGACCTCGGCCGCGATGACCTCGCCGCCGCGGTGCAGGGTCGCCTGAACGGCCTCCTGTCCCGCTACGCCGGCCGCTTCCCGCACTACGACGTCAACAACGAGATGCTGCACGGCCGCTTCTACCGCGACCGGCTCGGCGACGACGCCGCAGCGCTCATGTTCCGCGAGGCCGCGCGGCTGGACCTGGGCGCGCAGCTCTTTGTCAACGACTACAACGTCGAGTGCGCCAACGACCCCAACGCGACGCCCGAGAAGTACGTCGAGCTGGTCGACGCGCTACGGCGCGGTGGCGCGGCGGTGGGCGGCATCGGCATCCAGGGGCACGTCTCCAACCCATCCGGCGAGGTCATCTGCGACGCGCTCGACAAGCTCGCCACGACGGGGCTTCCCGTCTGGATCACCGAGCTGGACGTGGGCGAGCCCGACGTGTCCCTCCGCGCCGACGACCTGGAGGTGGTGCTCCACGAGGCGTACGCGCACCCGGCCGTGGCCGGCGTCGTGCTCTGGGGTTTCATGCAGGGCCGCATGTGGCGCCAGGACGCGTCCCTCGTCAACGCCGACGGCACCATCAACGAGGCCGGCCAGAGGCTGGTTGATCTCCGGAGGGAGTGGACGTCGGACGCGCGCGGGACCGTCGACGGCGACGGCAATTTCAGGTTCAGGGGCTACCACGGCACGTACGTCGTGCAGGTGACGACGGCGGCGGGGAAGACTCTCAAGACGTTCACCGTGGACAAAGGAGACACATCCCTCGTGGTGGATATGGCAAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018338