BGIOSGA018343

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Revision as of 02:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018343| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018343, complete gene.| tag = OS05G03...")
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Gene Name

BGIOSGA018343

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018343, complete gene.

LocusTag

OS05G0302300

Ensembl Transcript ID

BGIOSGA018343-TA

Ensembl Protein ID

BGIOSGA018343-PA

Length

5293

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14560731..14566023

Sequence Coding Region

14565901..14566023,14564602..14564679,14563998..14564516,14563698..14563916,14563232..14563393
,14562537..14562905,14561547..14562411,14561351..14561454,14561057..14561254
,14560731..14560958

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14560731..14566023 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14560731..14566023 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTTCCTCCCGCGACCCCGGCGAGGAGGCCAGCGCGCCGCCGCCCCCGCCCCCGCGCCGCGGCGAGAAGCGGCGAATGCGCGGCCGCACCCCGTCGCCGGAGCCGGCCTCCGCGCCGCAGACAAATGGAAAGTGGCATCCACATGAATCGTACAGACCTGAAATTGATGATGCCCCTGTTTTCACTCCAACGGAAGAGGAGTTTAAAGATCCAATTAGATATATTACGAGCATTCGTCCCCAAGCAGAAAAGTATGGAATTTGTCGTATTGTTCCACCATCTTCTTGGCGACCGCCTTGTTCTCTGAAGGAGAAGAACTTCTGGGAATGTACAGAGTTCAATACCCGTGTTCAACAAGTTGACAAGCTTCAAAACCGGGAACCCACAAAGAAAAAATCACAACCTCGAGTTCAGAAGAAGAGGAAGAGGAGAAAGAGACTGAGATTTGGGATGACTCACAGGCGTCCTAGTGCAAATACATCAGAAGACTGCGCAGATGCAGACGAGAAGTTTGGCTTTCAATCTGGCTCAGATTTCACACTAGATGAGTTTCAGAAATATGCAGATGAGTTTAAGCAGCAGTATTTTGGAATAAAGGGAAGTGACGAAATCCCTCTTTCTGAAATTAAAAAGAAGAAAAAAAATTGGCAACCATCGGTCGATGAAATAGAGGGAGAATATTGGCGGATAGTTGTATGCCCCACTGACGAAGTTGAGGTGGATTATGGTGCTGATTTGGACACTTCAATGTTCAGTAGTGGATTCTCTAAATTATCTTCAGATTCAAATAGACGAGATCCATATGGTTTATCTTGTTGGAATTTGAACAATCTTCCACGTATTCCTGGGTCTGTACTGTCATTTGAAACTGAGGATATATCTGGCGTCGTAGTCCCTTGGCTTTATGTAGGGATGTGCTTCTCATCATTCTGTTGGCACGTGGAAGATCATTTCCTTTATTCTATGAATTACATGCATTTTGGTGAACCAAAAGTATGGTATGGTGTTCCTGGTGCTGATGCAGTGAAGCTGGAAGAAGCTATGAGAAAGAACTTACCAAGATTGTTTGAAGAACAGCCTGATCTCCTACATGAGCTGGTTACGCAATTATCTCCTTCTGTTCTTAAATCAGAAGGAGTTCCTGTTTATCGTGTTGTTCAGAATCCAGGCGAGTTTGTTCTAACGCTACCGCGAGCTTACCATTCTGGGTTCAACTGTGGCTTCAACTGTGCGGAGGCAGTAAATGTCGCACCTGTGGATTGGCTGCCTCACGGACAATGTGCTGTTGAGCTCTACAGGGAGCAGCGGCGCAAGACATCCATATCACATGACAAATTATTACTAAAAACTGCAAATGAAGCTGTCAGACAGCTTTGGATGAACCTTAGCGACTGCAAAAGTGAACAAGGAGTATACAGATGGCAGGATACTTGCGGAAAGGACGGAATGCTGACAAGTGCAATTAAGACAAGGGTTAAAATGGAGAAGGCAGCACGGGGAGGGAATATGGCACTGCGATATAAGAAAATGGATGGGGATTATGATTCAGCTGACCGGGAATGCTTTTCATGTTTTTATGATCTCCATTTGTCAGCTGTCAGCTGCCAATGCTCCCCAAATCGTTTTGCTTGCTTAAACCATGCAAACATTCTATGTTCATGTGAAATGGACAGAAAAACCGCGTTGTTGCGGTATACCATAGAGGAGCTCCATACTCTTGTTGCAGCTCTAGAGGGTGATCCAACTGCGGTCTACCAGTGGGGACAGAATGATTTAGGTTTAGTCTGCCCATCTGGTTCTACTCAGTACAAGAAGATGGACTTGGGTGAAAACACGGAATTTCCGGATTCAGCAACCAACGTCAATCATGGCTGCAGCTTAGGAAGTCAAGATCAATATCACTATGACCCCGCAAAGCCAGCAGGATACCAGCAAGAGAAGGGAATCCAGATTGCTTCAGAAAAACATGATAAGAACAAGATGGTTGTCAATCTTGAGTCTCCAGCAACAGCTAGTAATCCAAGCAGGTCAAAGTCTGACTGCAGTGGCTCACTGTCCTTGAATCATTCATCTGAGTTACCATCTTCAAGAATTCAAACAGGAAATTCTACGCTAGCTTCCATTACCACAGAGAAACTGTTTGGTGTTGACATTAAATCCAATTTAGCACAGTCTTCTGATGGCCAAGTTAGTCAATTGGCCAAGCCTTCCTCGAGCCAAACTGATGAAGTCTCTAAGCCAGCAATAGCTAAGTATACGGTTGAGCTGCTAGACAGTGGAACAATGATGATTGGTAAAAAGTGGTGCAATCAGCAAGCTATATTCCCCAAAGGATTTAAGAGTCGAGTTACATTTCATAGTGTACTAGATCCAACAAGGACATGCTGCTACATCTCCGAAGTTCTTGATGCTGGGCTTCTTGGACCATTGTTTAGGGTGACTGTCGAAGGTCTTCCAGAAGTTTCGTTTACTCACACATCACCAATGCAATGTTGGGACAGTGTAAGAGACAGAGTAAATGAAGAAATAGCAAAACAAATAAGTTTTGGAAAATCTGGCCTTCCTGATTTTCTATCCTGCAATTCTTTGAATGGACTTGAAATGTTTGGGTTCTTATCCTCCCCTATAATTAAGGAAATCGAGGCTCTAGATCCCTGTCACCAATGCTTGGACTATTGGTTGTCAAGGGTTTCTTCTGTTGGAACTGAACTCCCCTCGGAATCTGTGATGGCAGCAATGGTTAATGACTCCACTAACCCCCCAATAAAGTTGCTCGGGATTGAGATTAACCGGAAGGAATCAGAACAATCAAGTAGCTTCAATAATTCCTGTGTGAGGAGGTCACACTTGGCAGGTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MVSSRDPGEEASAPPPPPPRRGEKRRMRGRTPSPEPASAPQTNGKWHPHESYRPEIDDAPVFTPTEEEFKDPIRYITSIRPQAEKYGICRIVPPSSWRPPCSLKEKNFWECTEFNTRVQQVDKLQNREPTKKKSQPRVQKKRKRRKRLRFGMTHRRPSANTSEDCADADEKFGFQSGSDFTLDEFQKYADEFKQQYFGIKGSDEIPLSEIKKKKKNWQPSVDEIEGEYWRIVVCPTDEVEVDYGADLDTSMFSSGFSKLSSDSNRRDPYGLSCWNLNNLPRIPGSVLSFETEDISGVVVPWLYVGMCFSSFCWHVEDHFLYSMNYMHFGEPKVWYGVPGADAVKLEEAMRKNLPRLFEEQPDLLHELVTQLSPSVLKSEGVPVYRVVQNPGEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQCAVELYREQRRKTSISHDKLLLKTANEAVRQLWMNLSDCKSEQGVYRWQDTCGKDGMLTSAIKTRVKMEKAARGGNMALRYKKMDGDYDSADRECFSCFYDLHLSAVSCQCSPNRFACLNHANILCSCEMDRKTALLRYTIEELHTLVAALEGDPTAVYQWGQNDLGLVCPSGSTQYKKMDLGENTEFPDSATNVNHGCSLGSQDQYHYDPAKPAGYQQEKGIQIASEKHDKNKMVVNLESPATASNPSRSKSDCSGSLSLNHSSELPSSRIQTGNSTLASITTEKLFGVDIKSNLAQSSDGQVSQLAKPSSSQTDEVSKPAIAKYTVELLDSGTMMIGKKWCNQQAIFPKGFKSRVTFHSVLDPTRTCCYISEVLDAGLLGPLFRVTVEGLPEVSFTHTSPMQCWDSVRDRVNEEIAKQISFGKSGLPDFLSCNSLNGLEMFGFLSSPIIKEIEALDPCHQCLDYWLSRVSSVGTELPSESVMAAMVNDSTNPPIKLLGIEINRKESEQSSSFNNSCVRRSHLAGC</aaseq>

Gene Sequence

<dnaseqindica>1..123#1345..1422#1508..2026#2108..2326#2631..2792#3119..3487#3613..4477#4570..4673#4770..4967#5066..5293#ATGGTTTCCTCCCGCGACCCCGGCGAGGAGGCCAGCGCGCCGCCGCCCCCGCCCCCGCGCCGCGGCGAGAAGCGGCGAATGCGCGGCCGCACCCCGTCGCCGGAGCCGGCCTCCGCGCCGCAGGTACGTGCTTACGAGGCCGGATTTGCATGTGGTGTTAGTAGGGTAGATCAGGGGGGAACACGCCGCCTTCTTCGTCGTCGTACGTGGTGGTGGATTCCTTTTTGTTTGTTATATATATAATTTTTGTTCCGTCTCGCCCTTCACGTTTCGAGGAACTGTTCATTTGGTAGGCGACTGTTGCACGTAAGGAATCGTTGCCGTGGGTTTGGGGTTCGTTCGTTTTGATTGGAGAGGATAGAATTCTGTCTGTATGGATCGTGAATTTAGTTCTCTGGTATGGAGCATGTGGGGGGAGTTTCTATTTGTGTGTTGTTTGGGTGCTATCAGGTCGGATGAGTAGCAATGAGATGCGAATTTCTGGATGCGATGCGTTTGATTTGGGGTTCTTAGATTAGGTCGGGAGAGCATTGGGTGGATCGATGAATAATGTGTCCTAGAGAGAAAAACTTATGGATCCTGAGAATTGTAGGTTTAAAATTGATATGCGATTCGGATGCCGCAACAGATTGGCATCTTCCCCTAGGTAACTCTGGGTTCTGTTGTTCCTGATTTGAGATTAAAGGAATAATTTCCCCCAACCTATCATGTCGATCTGTAAATTGGTGATGCAAATTTGTGTGTGATTTCAGTGGCTGTAACTAATTCGATGTTCTTGGCCTATTGGGGGAATTTGGGATTTGGCCCGGCGAAAAAACTTGGATTTGCCCTTGTGCTAGTAGATTGACAAATCCATGAATTGATTATATGATATAAATATATGCCAATCTATGAGAAAATTCTACTAAATCAAATCAACTTTCCTCAAGTAATGATGTTGGAACTAAAGTCCATTGATCGACCAATCATGAACTCAAGCATATACATGCGGATATGTAAACAAATTTTGATGAATGGTATCGTGCAATATTATTTATTTTCCATTGGTAAATGTTAAATTGTTAACTTGTAATAGAAATTTCTCTGTCCTATAAGAACATCCAATCTGTGGCACTTTCCTGATGAATGAAATATTCAAGGTACAAGCTAATTTTGTAAGACTACTCCTTTTCAGGATCTCTGCCCATCAGGAGCTTGCGGGGACAATGTTGCTGGAGCTACAACTGTAATTCCTTGAAAAGTTTTGATTTTATTAGCTGAATGTTGTCATTTCTATTCCTCTACAGCTTTATTATTATTGGCTAATTAATTTTTCATGCTATTTTATCTTACTTTTATGAACAGACAAATGGAAAGTGGCATCCACATGAATCGTACAGACCTGAAATTGATGATGCCCCTGTTTTCACTCCAACGGAAGAGGTTTGTGTACATTTATCTTACATAACTATTCCATGAGATATGCTGATAGCATAGTAATAGTTAGCTAATCGTTCTTTCCCTTCAGGAGTTTAAAGATCCAATTAGATATATTACGAGCATTCGTCCCCAAGCAGAAAAGTATGGAATTTGTCGTATTGTTCCACCATCTTCTTGGCGACCGCCTTGTTCTCTGAAGGAGAAGAACTTCTGGGAATGTACAGAGTTCAATACCCGTGTTCAACAAGTTGACAAGCTTCAAAACCGGGAACCCACAAAGAAAAAATCACAACCTCGAGTTCAGAAGAAGAGGAAGAGGAGAAAGAGACTGAGATTTGGGATGACTCACAGGCGTCCTAGTGCAAATACATCAGAAGACTGCGCAGATGCAGACGAGAAGTTTGGCTTTCAATCTGGCTCAGATTTCACACTAGATGAGTTTCAGAAATATGCAGATGAGTTTAAGCAGCAGTATTTTGGAATAAAGGGAAGTGACGAAATCCCTCTTTCTGAAATTAAAAAGAAGAAAAAAAATTGGCAACCATCGGTCGATGAAATAGAGGGAGAATATTGGCGGATAGTTGTATGCCCCACTGACGAAGTTGAGGTATTTAGTTTGCTATCTGTGCATCATCTTCCTATTTAACTATTAATACATACTGATAAGCATCGGACTCTCTTTGACTAGGTGGATTATGGTGCTGATTTGGACACTTCAATGTTCAGTAGTGGATTCTCTAAATTATCTTCAGATTCAAATAGACGAGATCCATATGGTTTATCTTGTTGGAATTTGAACAATCTTCCACGTATTCCTGGGTCTGTACTGTCATTTGAAACTGAGGATATATCTGGCGTCGTAGTCCCTTGGCTTTATGTAGGGATGTGCTTCTCATCATTCTGTTGGGTAAGCTTTTATTTTCTCATTGACCCATTTTTACAATGTTATCATTCTGTTGGTAATAGTATAATAGCCGTTTGCCTAGGTAAAAGTAATCTAATTAACTTCCTTGCTTGTTGAAGAATGAACATATTATTGCTCTATGGGATTGGAAAATGCTACTAGCCTAGTGATATTCTAACCTGGCAGTGCTATTCAATCTTCTTAGTGGATTAACATAAGATGAATGTTTACATAGTAGGAAAATATGTGATTTTTAATTGATTATGATAATTATTCTTGGCTGATATCTCTCTCTTGAACTTTGTAGCACGTGGAAGATCATTTCCTTTATTCTATGAATTACATGCATTTTGGTGAACCAAAAGTATGGTATGGTGTTCCTGGTGCTGATGCAGTGAAGCTGGAAGAAGCTATGAGAAAGAACTTACCAAGATTGTTTGAAGAACAGCCTGATCTCCTACATGAGCTGGTAACCATTTGAAATTGCATGTTTGTTATGTAATAGAATTGACCCTGTGATTCTAACAACATGAATTCACTGATTGCAAAATAAACTTTTTGGATATATTGCGAACTGGAAACAACTTAGCATCCATGTACTGAAATTCAAAGGAAAACATTATTTTCTGTTCCATTTTAGTACTCTATTTATTATCATTGCCTAGTGCCTACTACCAGTCACAAATTCTTGCTGACACTACACAGTGGTTCATCTGAGAATAATTATCTTCCTGTATTGTACAAATAAATATGCTGCATCTTCATTCATTTTCATCCTAAATTTTCATGGTGCAGGTTACGCAATTATCTCCTTCTGTTCTTAAATCAGAAGGAGTTCCTGTTTATCGTGTTGTTCAGAATCCAGGCGAGTTTGTTCTAACGCTACCGCGAGCTTACCATTCTGGGTTCAACTGTGGCTTCAACTGTGCGGAGGCAGTAAATGTCGCACCTGTGGATTGGCTGCCTCACGGACAATGTGCTGTTGAGCTCTACAGGGAGCAGCGGCGCAAGACATCCATATCACATGACAAATTATTACTAAAAACTGCAAATGAAGCTGTCAGACAGCTTTGGATGAACCTTAGCGACTGCAAAAGTGAACAAGGAGTATACAGATGGCAGGATACTTGCGGAAAGGACGGAATGCTGACAAGTGCAATTAAGGTACTCACTAGTTTAGGCCGTTGTTATTTATCACTGATTATTAATCAGCTGTGACTCAAAGGATTAACTCTTTCTTTTTCATCAAAAAGACTAATTACTCATATTTTGGTTGTACTATATTGCAGACAAGGGTTAAAATGGAGAAGGCAGCACGGGGAGGGAATATGGCACTGCGATATAAGAAAATGGATGGGGATTATGATTCAGCTGACCGGGAATGCTTTTCATGTTTTTATGATCTCCATTTGTCAGCTGTCAGCTGCCAATGCTCCCCAAATCGTTTTGCTTGCTTAAACCATGCAAACATTCTATGTTCATGTGAAATGGACAGAAAAACCGCGTTGTTGCGGTATACCATAGAGGAGCTCCATACTCTTGTTGCAGCTCTAGAGGGTGATCCAACTGCGGTCTACCAGTGGGGACAGAATGATTTAGGTTTAGTCTGCCCATCTGGTTCTACTCAGTACAAGAAGATGGACTTGGGTGAAAACACGGAATTTCCGGATTCAGCAACCAACGTCAATCATGGCTGCAGCTTAGGAAGTCAAGATCAATATCACTATGACCCCGCAAAGCCAGCAGGATACCAGCAAGAGAAGGGAATCCAGATTGCTTCAGAAAAACATGATAAGAACAAGATGGTTGTCAATCTTGAGTCTCCAGCAACAGCTAGTAATCCAAGCAGGTCAAAGTCTGACTGCAGTGGCTCACTGTCCTTGAATCATTCATCTGAGTTACCATCTTCAAGAATTCAAACAGGAAATTCTACGCTAGCTTCCATTACCACAGAGAAACTGTTTGGTGTTGACATTAAATCCAATTTAGCACAGTCTTCTGATGGCCAAGTTAGTCAATTGGCCAAGCCTTCCTCGAGCCAAACTGATGAAGTCTCTAAGCCAGCAATAGCTAAGTATACGGTTGAGCTGCTAGACAGTGGAACAATGATGATTGGTAAAAAGTGGTGCAATCAGCAAGCTATATTCCCCAAAGGTATATACACTGAACAATGCAATGATTATTTTTGTCTTCTGGTAATATGTACATCCTCCAGAAATATCACTAATAGAAATTCATCTATGCAGGATTTAAGAGTCGAGTTACATTTCATAGTGTACTAGATCCAACAAGGACATGCTGCTACATCTCCGAAGTTCTTGATGCTGGGCTTCTTGGACCATTGTTTAGGGTACGCTTTTATTATAAACGCTTCTTGTTTTTCTAAATTTCAGGATTTGTCTGCTTTCCTTCATTGTGCTCACATAAGCTACTGAATTAATAACAGGTGACTGTCGAAGGTCTTCCAGAAGTTTCGTTTACTCACACATCACCAATGCAATGTTGGGACAGTGTAAGAGACAGAGTAAATGAAGAAATAGCAAAACAAATAAGTTTTGGAAAATCTGGCCTTCCTGATTTTCTATCCTGCAATTCTTTGAATGGACTTGAAATGTTTGGGTTCTTATCCTCCCCTATAATTAAGGTAGATTTTTACGATATCCACAGTATTTATTTTTGTGAAACCTGGTCACTTCAAGTAACTAGTTGAATATTACACAAAAATTCTTTGTTGTTCAACAGGAAATCGAGGCTCTAGATCCCTGTCACCAATGCTTGGACTATTGGTTGTCAAGGGTTTCTTCTGTTGGAACTGAACTCCCCTCGGAATCTGTGATGGCAGCAATGGTTAATGACTCCACTAACCCCCCAATAAAGTTGCTCGGGATTGAGATTAACCGGAAGGAATCAGAACAATCAAGTAGCTTCAATAATTCCTGTGTGAGGAGGTCACACTTGGCAGGTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018343