BGIOSGA018384

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Revision as of 02:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018384| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018384, complete gene.| tag = P0048F1...")
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Gene Name

BGIOSGA018384

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018384, complete gene.

LocusTag

P0048F12.11

Ensembl Transcript ID

BGIOSGA018384-TA

Ensembl Protein ID

BGIOSGA018384-PA

Length

2870

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12994742..12997611

Sequence Coding Region

12996898..12997611,12994742..12995641

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12994742..12997611 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12994742..12997611 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGAAGCCATGTGAATTTCCAACGGCCGTTCTCTCCTTCCGTCGCTTCCTCCAGAGACGCTTCTTGGGAGGGCGGCACCACCACCGCCCAACGTCGACCACGGCAACTGGTGCAGCTATACCACCGGCAGATAAGCTACACAACCAAACTGTAATGATTGATCTGGAGTCATGGCTACTGAGGTCGCCCATGTCGACCTTCCCTTACTTCATGATCGTCGCCATCGAGGCCGGTAGCTTCCTCCGCGGCCTCATCCTGCTGCTGATATACCCTCTCTTATGGCTCCTTCTCAGCCATGACATGCTTCTCAAGGCCATGGTCATGGTGTCCTTCTTTGGGTTGCCCGAGAAGGAGGTGGTCAGGATTGGTAAGGCAGTTCTACCAAAGTTCTTCCTGGAAGGGATGGCCATGGAGGGGCTGGAGGTGGTGAGGAACGCGAAGAAAGTGGTCGTGTTTAGTCCGTTGTTTCCGAGGGTGATGGTCGAGGGTTTCTTGAAAGAGTACATAGGCGTGAACGCTGTCATCGGAAGGGAGGTCATAGCGGTTGCCGGGCGTTACGTCGGGCTCCTCGTCGACCACATTGACATGGACGATGGAGGTTTTGTTGACGAGGTGATGGAAGAGACGAAGCGCGGCAAGGGCGACGGAGCTGTTGGGCTTGCTGGAGTGGGCAGCAAGATGCATCATCTGTTTTCTCGTTATTGCAAGGAAACCTATGTTGTATGTGACGCCGACAAGAAGGAATGGCAGCCGGTGCCAAGAGAGAAGTACCCTAAACCTTTGATCTTCCACGATGGCCGGCTCGCCTTCAAGCTGACGCCCTGTGCCGCGGTGGCGATGTACACCTACCTACCTTGGGGTATCTTCCTCGCCGTCTTCCGCAGCCTGGCATTTGGCCTCCTCCCCTACCGTGTGTCCGTCCCTCTCGCCGCGTTCACTGGCATGCGCTCCCGTCTGATCGCCGGCCCGTCGCCTGATGCCACCCGCCGGAACAGCGGGACGGCCGGGGGTCGCCTCTACGTCTGCAACCACCGCACGCTCCTGGACCCTATTACCGTCGCGGCCGTGCTGAACAAGCCCATCACTGCGGTGACGTACAGTGTAAGCCCGGTATCGGAGTTGATTGCGCCAATCCGCACGGCGCGCCTGACGCGCGACCGGGACGAGGACCGGCGGCGCATGGAGGCGCTGCTGGCGCGCGGCGACCTCGTGGTGTGCCCCGAGGGCACCACGTGCCGTGAGCCGTACCTCCTTCGGTTTAGCCCACTCTTCGCTGAGCTCACCGGCGAGGTGACCCCCGTTGCGCTGGAGACACGGATTGACATGTTCTACGGCACGTCGACGAAGCCTGCCGCCAAGTGGCTGGACCCATTCTACTTCATGCTGAATTCGAGACCGGAGTACCACGTCGAGTTCCTGCAGCCCGTCAGCACCGCTCCAGTAGACGGTGAGGCAGGCGGTCACGGCCACAGTATCAACGCCGCAAACAGGGTACAGCGCGTGCTCGGCGAGGCGCTTGCATTCGAGCTGACAGAGCAGACGCGAAAGGACAAGTACGAGATGCTGGCCGGGAATAAAGGGAACGTGAAAGGTGAAGCCAAGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MAKKPCEFPTAVLSFRRFLQRRFLGGRHHHRPTSTTATGAAIPPADKLHNQTVMIDLESWLLRSPMSTFPYFMIVAIEAGSFLRGLILLLIYPLLWLLLSHDMLLKAMVMVSFFGLPEKEVVRIGKAVLPKFFLEGMAMEGLEVVRNAKKVVVFSPLFPRVMVEGFLKEYIGVNAVIGREVIAVAGRYVGLLVDHIDMDDGGFVDEVMEETKRGKGDGAVGLAGVGSKMHHLFSRYCKETYVVCDADKKEWQPVPREKYPKPLIFHDGRLAFKLTPCAAVAMYTYLPWGIFLAVFRSLAFGLLPYRVSVPLAAFTGMRSRLIAGPSPDATRRNSGTAGGRLYVCNHRTLLDPITVAAVLNKPITAVTYSVSPVSELIAPIRTARLTRDRDEDRRRMEALLARGDLVVCPEGTTCREPYLLRFSPLFAELTGEVTPVALETRIDMFYGTSTKPAAKWLDPFYFMLNSRPEYHVEFLQPVSTAPVDGEAGGHGHSINAANRVQRVLGEALAFELTEQTRKDKYEMLAGNKGNVKGEAKM</aaseq>

Gene Sequence

<dnaseqindica>1..714#1971..2870#ATGGCGAAGAAGCCATGTGAATTTCCAACGGCCGTTCTCTCCTTCCGTCGCTTCCTCCAGAGACGCTTCTTGGGAGGGCGGCACCACCACCGCCCAACGTCGACCACGGCAACTGGTGCAGCTATACCACCGGCAGATAAGCTACACAACCAAACTGTAATGATTGATCTGGAGTCATGGCTACTGAGGTCGCCCATGTCGACCTTCCCTTACTTCATGATCGTCGCCATCGAGGCCGGTAGCTTCCTCCGCGGCCTCATCCTGCTGCTGATATACCCTCTCTTATGGCTCCTTCTCAGCCATGACATGCTTCTCAAGGCCATGGTCATGGTGTCCTTCTTTGGGTTGCCCGAGAAGGAGGTGGTCAGGATTGGTAAGGCAGTTCTACCAAAGTTCTTCCTGGAAGGGATGGCCATGGAGGGGCTGGAGGTGGTGAGGAACGCGAAGAAAGTGGTCGTGTTTAGTCCGTTGTTTCCGAGGGTGATGGTCGAGGGTTTCTTGAAAGAGTACATAGGCGTGAACGCTGTCATCGGAAGGGAGGTCATAGCGGTTGCCGGGCGTTACGTCGGGCTCCTCGTCGACCACATTGACATGGACGATGGAGGTTTTGTTGACGAGGTGATGGAAGAGACGAAGCGCGGCAAGGGCGACGGAGCTGTTGGGCTTGCTGGAGTGGGCAGCAAGATGCATCATCTGTTTTCTCGTTATTGCAAGGTGAGCTTTTCCTCTCTTTTTTTCTACTCTATATAAGAAATGTATAAATAGTCTTCCGGGTATGTATTGATGAACAATTTGGTAGTATTGATTTTTGTCACAAAGAGATTTAATTACCAGATTATTATTATATAAGATAAATTAATTAAGGAGACAATAATCGCTAATCATGTTATAAGTAGACAATAGGTTATATTAAAATTAATTACTTACAGTTCTGATCTATTCGTAAACTATAGCCTCATGGCGATAAAGTATATATATACTATTATTCAGCCTATAATGTTAACGTACTATATGGCCACGTTAATTAACTAATTAACCATATGCGTATTAATAATTTAATTTAATATTATCTAGCTAGATAAGTTTGGTCCGAAATTTCATAACAGTTTTTACTTCACCAGAATTAATATATGCAACGACAGGGAATAATGTTAGCATGTACTTTTAGTTAACATCATGAACAATAAAAATCGTACAAGAACTTCTCAAGAAATTCAAGTGAAACGAGTCGCCAATATTTAGACTTTGGAGACGACTTTTACAGAAAGGAGTATGATCGAGTAGCTAAGTTGCGTTTGGTTTGAAATTGGTACACAGGAGGATTGCATATATATTTGACGCGCTCCAAATATGCCATGCATGCATTTGCTCTCTTCTTAGTTGAAGTTAGGTGGCAACAAGTACACCTAACCTATCTGTGTATGACGTGTAATTTATTTTTGAGGGGGCGCTCGTATCGTGTCCAGACCACAATAAGATCTCAACTAAGGTTATTATATTATTAGGTGGTACACCTGGAATTTTCAATCTGATAAAAATGATGTTGAGCTCTAGCTACTTGCATGGCTTAGGTAAAGCAGTTAAGAGAGATGATAAAAAGAGGAGCATTTCGTTGTGTTCTCTTTTTCTAATTGCATCTTAATTAATTGTCACTTTGAGCGGTGAAAGGTAAAATTTGCAAACTCATCATCCATGTAGATGAACAAATGAAACTTAATTCCTATATGCTAATGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGTTACGAGTTTTGTAGACGGTTCAAAAGTAGTGCGCGCTAAGTGCAGAACAACCAGTGCTTATATAAATGGATATATTCTCCTATTCTCTTCTGTAACATGACTTTCTCTGTGCACGCCTAGTGTATTTGCAGTACACGTAACAGTGCGATCTTAATGCAGGAAACCTATGTTGTATGTGACGCCGACAAGAAGGAATGGCAGCCGGTGCCAAGAGAGAAGTACCCTAAACCTTTGATCTTCCACGATGGCCGGCTCGCCTTCAAGCTGACGCCCTGTGCCGCGGTGGCGATGTACACCTACCTACCTTGGGGTATCTTCCTCGCCGTCTTCCGCAGCCTGGCATTTGGCCTCCTCCCCTACCGTGTGTCCGTCCCTCTCGCCGCGTTCACTGGCATGCGCTCCCGTCTGATCGCCGGCCCGTCGCCTGATGCCACCCGCCGGAACAGCGGGACGGCCGGGGGTCGCCTCTACGTCTGCAACCACCGCACGCTCCTGGACCCTATTACCGTCGCGGCCGTGCTGAACAAGCCCATCACTGCGGTGACGTACAGTGTAAGCCCGGTATCGGAGTTGATTGCGCCAATCCGCACGGCGCGCCTGACGCGCGACCGGGACGAGGACCGGCGGCGCATGGAGGCGCTGCTGGCGCGCGGCGACCTCGTGGTGTGCCCCGAGGGCACCACGTGCCGTGAGCCGTACCTCCTTCGGTTTAGCCCACTCTTCGCTGAGCTCACCGGCGAGGTGACCCCCGTTGCGCTGGAGACACGGATTGACATGTTCTACGGCACGTCGACGAAGCCTGCCGCCAAGTGGCTGGACCCATTCTACTTCATGCTGAATTCGAGACCGGAGTACCACGTCGAGTTCCTGCAGCCCGTCAGCACCGCTCCAGTAGACGGTGAGGCAGGCGGTCACGGCCACAGTATCAACGCCGCAAACAGGGTACAGCGCGTGCTCGGCGAGGCGCTTGCATTCGAGCTGACAGAGCAGACGCGAAAGGACAAGTACGAGATGCTGGCCGGGAATAAAGGGAACGTGAAAGGTGAAGCCAAGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018384