BGIOSGA018394

From RiceWiki
Revision as of 02:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018394| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018394, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018394

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018394, complete gene.

LocusTag

OSJNBA0018H09.7

Ensembl Transcript ID

BGIOSGA018394-TA

Ensembl Protein ID

BGIOSGA018394-PA

Length

2382

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12617292..12619673

Sequence Coding Region

12617292..12619673

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12617292..12619673 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12617292..12619673 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCACCGGCCGCGGGGTTTTCCCCAACAAGCCCGGCCTCCCTGCCGGCCCCAAGAAGCGCCCCCCTCCGCACACGGTGCTCCTGCCGGCCACGCCGCCGCCGCCGCCGTCGCGCTCCTCGCTCCCGCTCGACTCGCTTCTCCTCCACCTCACCGCGGCCCCGCCGCCGCCGCAGCCGCCGGCCACGCGCCGGCCGCATCCCACCCCGACCCCGCCGCACTCCTTCCTCTCCCCCGCCGCGCAGTCCCTCGTGGCCGCTATCTCCTCGCAGCCGCTCCCCTCGCTCCCGGCTTTCCTCTCCTCCCGCCGTGACGAGCTGCTGCGCTCTGACCTCCCCTCCCTCCTCAAGGCGCTCGAGCTCTCTGGCCACTGGGAGTGGGCTCTCGCGCTCCTCCGCTGGGCCAGCGACGAGGGCGCCGCCGATGCCGCGGCGCTCGAGATGGTCGTCCGCGCGCTCGGCCGCGAGGGCCAGCACGACGTCGTCTGCGACCTGCTCGACGAAATGCCGCTCCCGCCCGGATCACGCCTGGACGTCCGCGCCTACACCACGGTGCTTCACGCGCTCTCCCGCGCGGGCCGGTACGAGCGCGCGCTCCAGCTGTTCGCCGAGCTCCGGCGCCAGGGGGTGGTGCCCACGATCGTCACCTACAACGTCGTGCTCGACGTGTACGGCCGGATGGGGCGCTCGTGGCCGCGTATCGTCGCTCTACTGGAGGAGATGCGTGCCGCCGGCGTCGAGCCCGACGACTTCACTGCCAGCACAGTGATCGCGGCATGCGGCCGTGATGGCCTCCTTGATCAGGCGGTCGCCTTCTTTGAGGACCTCAAGGCCCGTGGCCACGTCCCGTGCGTTGTCACATACAATGCACTCCTGCAAGTGTTTGGCAAGGCCGGGAACTACACTGAGGCGCTGCGGGTGCTCAAGGAAATGGAGGATAGTGGCTGCCAGCCGGATGCCGTCACATACAATGAGCTCGCCGGGACATATGCCAGGGCTGGGTTCTTTGAGGAGGCTGCCAAGTGCCTTGACACAATGACCAGCAAGGGATTATTGCCTAACACATTCACGTACAATACTGTCATGACGGCATACGCGAATGTCGGTAGGGTGGATGAAGCACTAGCTCTGTTTGATCGAATGAAGAAGAATGGGTATGTTCCGAATGTGAACACCTACAATCTTATCTTTGGTATGCTGGGGAAGAAATCAAGGTTCACCGCGATGCTGGAGATGCTTGAGGAGATGTCAAGGAGTGGATGCACACCGAATCGGGTCACCTGGAACACGATGTTGGCCGTCTGTGGGAAGCGGGGTATGGAGGACTATGTCACCAGGGTACTCAACGGGATGAAATCTTGTGGGGTTGAGCTGAGCCGAGATACCTACAACACACTGATATCTGCCTATGGTCGATGTGGTTCGAGGACCTATGCTTTTAAGATGTATGATGAAATGATCAGTTCTGGCTTCACCCCTTGCCTCACCACATACAATGCTTTGCTGAATGTGCTGTCAAGACAAGGTGATTGGTCCACTGCTCAGTCCATAGTAAGCAAAATGCTGAAGAATGGTTTCAAGCCGAATGATCAGTCATATTCACTACTGCTCCAGTGCTATGCAAAGGGTGGCAATGCAGCTGGGATAGAGTCTATCGAGAAAGAAGTTTATGTCGGTACAATTTTTCCTAGTTGGGTTATCTTGCGGACACTTGTGATCGCAAACTTCAAGTGCCGTAGATTAGAAGGGGTTGAGAAGGCATTTCAAGAGGTAAAGGCACAGGGTTACAAGCCTGATCTTGTCATATTCAACTCCATGCTTGCAATGTATGCAAAGAATGGATTATATAGCAAGGCCACAGAGATGTTCGATTCAATAAAGCAGAGTGGGCTGAGCCCTGATCTAATCACTTACAACAGCTTAATGGACATGTATGCCAAGTCCAATGAGTCTTGGGAAGCTGAGAAAATACTTAAACAGCTCAAAAGTTCTCAGGTGAAGCCTGACGTTGTGTCATATAACACCGTCATAAACGGATTCTGCAAGCAAGGTCTGATCAAAGAAGCTCAGAGGATCCTATCTGAGATGATTGCTGATGGCATGGCTCCATGTGTTGTAACCTATCACACACTAGTTGGAGGATACGCCAGCCTGGAGATGTTTAATGAGGCAAGAGAGGTTGTCAACTACATGATTCACCACAACTTGAAGCCTATGGAGCTGACATACAGGAGAGTAGTCGACAGTTACTGCAAAGCCAAGCGGTATGATGAGGCCCGTGAGTTCCTGTCTGAAATTTCAGATACTGACCAAAATTTTGATCAGAAGTTGCAGCACATGCTTGAAGCCCGTATAAAGGATGCTCAATTTGGAAGATAA</cdnaseq>

Protein Sequence

<aaseq>MDATGRGVFPNKPGLPAGPKKRPPPHTVLLPATPPPPPSRSSLPLDSLLLHLTAAPPPPQPPATRRPHPTPTPPHSFLSPAAQSLVAAISSQPLPSLPAFLSSRRDELLRSDLPSLLKALELSGHWEWALALLRWASDEGAADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHMLEARIKDAQFGR</aaseq>

Gene Sequence

<dnaseqindica>1..2382#ATGGACGCCACCGGCCGCGGGGTTTTCCCCAACAAGCCCGGCCTCCCTGCCGGCCCCAAGAAGCGCCCCCCTCCGCACACGGTGCTCCTGCCGGCCACGCCGCCGCCGCCGCCGTCGCGCTCCTCGCTCCCGCTCGACTCGCTTCTCCTCCACCTCACCGCGGCCCCGCCGCCGCCGCAGCCGCCGGCCACGCGCCGGCCGCATCCCACCCCGACCCCGCCGCACTCCTTCCTCTCCCCCGCCGCGCAGTCCCTCGTGGCCGCTATCTCCTCGCAGCCGCTCCCCTCGCTCCCGGCTTTCCTCTCCTCCCGCCGTGACGAGCTGCTGCGCTCTGACCTCCCCTCCCTCCTCAAGGCGCTCGAGCTCTCTGGCCACTGGGAGTGGGCTCTCGCGCTCCTCCGCTGGGCCAGCGACGAGGGCGCCGCCGATGCCGCGGCGCTCGAGATGGTCGTCCGCGCGCTCGGCCGCGAGGGCCAGCACGACGTCGTCTGCGACCTGCTCGACGAAATGCCGCTCCCGCCCGGATCACGCCTGGACGTCCGCGCCTACACCACGGTGCTTCACGCGCTCTCCCGCGCGGGCCGGTACGAGCGCGCGCTCCAGCTGTTCGCCGAGCTCCGGCGCCAGGGGGTGGTGCCCACGATCGTCACCTACAACGTCGTGCTCGACGTGTACGGCCGGATGGGGCGCTCGTGGCCGCGTATCGTCGCTCTACTGGAGGAGATGCGTGCCGCCGGCGTCGAGCCCGACGACTTCACTGCCAGCACAGTGATCGCGGCATGCGGCCGTGATGGCCTCCTTGATCAGGCGGTCGCCTTCTTTGAGGACCTCAAGGCCCGTGGCCACGTCCCGTGCGTTGTCACATACAATGCACTCCTGCAAGTGTTTGGCAAGGCCGGGAACTACACTGAGGCGCTGCGGGTGCTCAAGGAAATGGAGGATAGTGGCTGCCAGCCGGATGCCGTCACATACAATGAGCTCGCCGGGACATATGCCAGGGCTGGGTTCTTTGAGGAGGCTGCCAAGTGCCTTGACACAATGACCAGCAAGGGATTATTGCCTAACACATTCACGTACAATACTGTCATGACGGCATACGCGAATGTCGGTAGGGTGGATGAAGCACTAGCTCTGTTTGATCGAATGAAGAAGAATGGGTATGTTCCGAATGTGAACACCTACAATCTTATCTTTGGTATGCTGGGGAAGAAATCAAGGTTCACCGCGATGCTGGAGATGCTTGAGGAGATGTCAAGGAGTGGATGCACACCGAATCGGGTCACCTGGAACACGATGTTGGCCGTCTGTGGGAAGCGGGGTATGGAGGACTATGTCACCAGGGTACTCAACGGGATGAAATCTTGTGGGGTTGAGCTGAGCCGAGATACCTACAACACACTGATATCTGCCTATGGTCGATGTGGTTCGAGGACCTATGCTTTTAAGATGTATGATGAAATGATCAGTTCTGGCTTCACCCCTTGCCTCACCACATACAATGCTTTGCTGAATGTGCTGTCAAGACAAGGTGATTGGTCCACTGCTCAGTCCATAGTAAGCAAAATGCTGAAGAATGGTTTCAAGCCGAATGATCAGTCATATTCACTACTGCTCCAGTGCTATGCAAAGGGTGGCAATGCAGCTGGGATAGAGTCTATCGAGAAAGAAGTTTATGTCGGTACAATTTTTCCTAGTTGGGTTATCTTGCGGACACTTGTGATCGCAAACTTCAAGTGCCGTAGATTAGAAGGGGTTGAGAAGGCATTTCAAGAGGTAAAGGCACAGGGTTACAAGCCTGATCTTGTCATATTCAACTCCATGCTTGCAATGTATGCAAAGAATGGATTATATAGCAAGGCCACAGAGATGTTCGATTCAATAAAGCAGAGTGGGCTGAGCCCTGATCTAATCACTTACAACAGCTTAATGGACATGTATGCCAAGTCCAATGAGTCTTGGGAAGCTGAGAAAATACTTAAACAGCTCAAAAGTTCTCAGGTGAAGCCTGACGTTGTGTCATATAACACCGTCATAAACGGATTCTGCAAGCAAGGTCTGATCAAAGAAGCTCAGAGGATCCTATCTGAGATGATTGCTGATGGCATGGCTCCATGTGTTGTAACCTATCACACACTAGTTGGAGGATACGCCAGCCTGGAGATGTTTAATGAGGCAAGAGAGGTTGTCAACTACATGATTCACCACAACTTGAAGCCTATGGAGCTGACATACAGGAGAGTAGTCGACAGTTACTGCAAAGCCAAGCGGTATGATGAGGCCCGTGAGTTCCTGTCTGAAATTTCAGATACTGACCAAAATTTTGATCAGAAGTTGCAGCACATGCTTGAAGCCCGTATAAAGGATGCTCAATTTGGAAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018394