BGIOSGA018407

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Revision as of 02:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018407| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018407, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018407

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018407, complete gene.

LocusTag

OSJNBA0037H03.5

Ensembl Transcript ID

BGIOSGA018407-TA

Ensembl Protein ID

BGIOSGA018407-PA

Length

3188

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12222029..12225216

Sequence Coding Region

12224832..12225216,12224628..12224723,12224441..12224533,12224263..12224348,12223661..12223939
,12223365..12223492,12222081..12222176,12222029..12222032

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12222029..12225216 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12222029..12225216 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGTCGTCGTCTTCCTCTGCCACTAGTAGCTCAACTCGTTGTCTTGCTCGGCTTGGCTTGCGGGCTCCGGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGTGGCCTTGCCGGTGAACGGGTTACATATCTGCCCGGGCAGCCGCCGGTGGACTTCGACATGTACTCCGGCTACGTCACGGTGGACAAGCGGGCGGGGCGGTCGCTGTTCTACTGGCTGCAGGAGGCGCCGGCGGCGGCGCAGCCGGCGCCGCTCGTGCTGTGGCTGAACGGCGGGCCCGGCTGCTCCTCCGTCGCGTACGGCGCGTCGGAGGAGCTCGGCGCCTTCCGCATCCGCCCCGACGGCGCCACCCTCTTCCTCAACGACTACCGGTGGAACAAAGTGGCGAACATCTTGTTCTTGGACTCGCCGGCCGGCGTCGGATTCTCATACACCAACACCACCTCCGACCTCTACGATTCCGGAGACAAGAGAACTGCTCATGATTCCTATAAGTTTCTGGTGAAATGGTTCGAGAAGTTCCCGCAGTATAAATACCGAGATTTCTACATCGCCGGGGAGAGCTACGCAGGGCACTATGTTCCTCAGTTGTCCCAGCTTGTGTACCGTAACAACAAAGGCGTCAAGGAGCCCCTGATCAACTTCAAAGGCTTCATGGTGGGGAACGCCGTGACGGACGACTACCACGACTACATCGGCACGTTCGAGTACTGGTGGAACCACGGGATCATCTCCGACGGCACGTACCGGCTGCTGAACGCGTCGTGCGTGCACGACTCCGGCGAGCACCCGGCACCGGCGTGCCTCGCCGCGCTCAACGCCTCCACGGTGGAGCAGGGCGACATCGACATGTACAGCCTCTACACGCCCACCTGCAACGAGACCTCCACCTCGTCGGCGGCGGCGAGGCAGCGGCGGCTCAAGCAAGGCCACTATCCGTGGATGACAGGGTCGTATGATCCGTGCACGGAGAGATACTCAACGGAGTACTACAACCGGCCGGAAGTGCAGAGGGCGCTCCACGCCAACGTCACTGGCATAAACTACACATGGGCGACGTGCAGTGACATCCTCAACGACAACTGGAGAGATTCGCCAAGGTCCGTGCTTCCTATCTACCATGAGCTTATTGCAGCTGGCCTAAGAATATGGGTCTTCAGATAA</cdnaseq>

Protein Sequence

<aaseq>MASRRLPLPLVAQLVVLLGLACGLRSSSAAAAAASGLAGERVTYLPGQPPVDFDMYSGYVTVDKRAGRSLFYWLQEAPAAAQPAPLVLWLNGGPGCSSVAYGASEELGAFRIRPDGATLFLNDYRWNKVANILFLDSPAGVGFSYTNTTSDLYDSGDKRTAHDSYKFLVKWFEKFPQYKYRDFYIAGESYAGHYVPQLSQLVYRNNKGVKEPLINFKGFMVGNAVTDDYHDYIGTFEYWWNHGIISDGTYRLLNASCVHDSGEHPAPACLAALNASTVEQGDIDMYSLYTPTCNETSTSSAAARQRRLKQGHYPWMTGSYDPCTERYSTEYYNRPEVQRALHANVTGINYTWATCSDILNDNWRDSPRSVLPIYHELIAAGLRIWVFR</aaseq>

Gene Sequence

<dnaseqindica>1..385#494..589#684..776#869..954#1278..1556#1725..1852#3041..3136#3185..3188#ATGGCCAGTCGTCGTCTTCCTCTGCCACTAGTAGCTCAACTCGTTGTCTTGCTCGGCTTGGCTTGCGGGCTCCGGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGTGGCCTTGCCGGTGAACGGGTTACATATCTGCCCGGGCAGCCGCCGGTGGACTTCGACATGTACTCCGGCTACGTCACGGTGGACAAGCGGGCGGGGCGGTCGCTGTTCTACTGGCTGCAGGAGGCGCCGGCGGCGGCGCAGCCGGCGCCGCTCGTGCTGTGGCTGAACGGCGGGCCCGGCTGCTCCTCCGTCGCGTACGGCGCGTCGGAGGAGCTCGGCGCCTTCCGCATCCGCCCCGACGGCGCCACCCTCTTCCTCAACGACTACCGGTGGAACAAAGGTCAGCAAATATATGTATTCAGAGTTGTTCAGAATTCAGGAGATGAAATCATTTCTTGTATGGTATGTAGATGAAATAATTTGTGAAATTTGTTTCAATGGCTGCCAGTGGCGAACATCTTGTTCTTGGACTCGCCGGCCGGCGTCGGATTCTCATACACCAACACCACCTCCGACCTCTACGATTCCGGAGACAAGAGAACTGGTGAATTGCAAAACAATAAACTAGTAATCAATTCTGTTTATGAAATCACTCAAAAGTTATTGGATTTTATATATTATTTTAAAAATTTTTGCAGCTCATGATTCCTATAAGTTTCTGGTGAAATGGTTCGAGAAGTTCCCGCAGTATAAATACCGAGATTTCTACATCGCCGGGGAGAGCTACGCAGGCATTTCATTACTCTGTTTTTTTTTTTTACTCAGTTTTTTTCTGCTTAATTGTTTATGGACTAGGCTATAAATAACAATTTAAATGCTGCAGGGCACTATGTTCCTCAGTTGTCCCAGCTTGTGTACCGTAACAACAAAGGCGTCAAGGAGCCCCTGATCAACTTCAAAGGCTTCATGGTACGTAGTACACATTACATACACCTTCCCTTCCCTTACCATCATTCGCTATATTGAATTGCATGCACTCGTACCAGTAGATAAAGACCAACAAATTCACTTATATACTTTGAGAAATAGAAAAAAATGAAAGTACAAACGGCGACTTTAGGTGTGTTTAGTTCACGCTAAAATTAAAAATTTGGTTGAAATTGGAACGATGTGACGGAAAAGTTGAAAGTTTATGCGTGTAGAAAAATTTTGATGTGAAGAAAAAGTTGAAAGTTTGTGGAAAAAGTTTGAAATTAAACTCGGCCTTTGAATGAATAATTGTACGATTTCAGGTGGGGAACGCCGTGACGGACGACTACCACGACTACATCGGCACGTTCGAGTACTGGTGGAACCACGGGATCATCTCCGACGGCACGTACCGGCTGCTGAACGCGTCGTGCGTGCACGACTCCGGCGAGCACCCGGCACCGGCGTGCCTCGCCGCGCTCAACGCCTCCACGGTGGAGCAGGGCGACATCGACATGTACAGCCTCTACACGCCCACCTGCAACGAGACCTCCACCTCGTCGGCGGCGGCGAGGCAGCGGCGGCTCAAGCAAGGCCACTATGTGCGTTTAATTTTTTTTCTCAATTTTTATATAATGGATTAAACCGGCCTCTACACTCAAGGATGCACACAGCCTTATTTTTCCTCGATTTGTGTTGTTGTTTTCTACTTTATTTTTCTGGAAAGTTTTGTTATGTGAAATGTAAATGTTTTGTGTGTGTATATGCAGCCGTGGATGACAGGGTCGTATGATCCGTGCACGGAGAGATACTCAACGGAGTACTACAACCGGCCGGAAGTGCAGAGGGCGCTCCACGCCAACGTCACTGGCATAAACTACACATGGGCGACGTGCAGGTTAGTTTGTGCATGCATGCATGCCTGCTTGCCAAAAAGTTTAATACCTTTTTTCTTTACATTGACACATGGAAGACACGTACATTCACACGCACGAGAAAACACACATGCTTTAATTACTCGTAGAGACGAAGACCAACGACAAATTCCTCGTCTAAAATTCTACTATTAAAAACACACATGTTCTAATTTTGAACCTGATAGACAAAAGGTCGTGTATATGTGACTTTGTCACCACATCATCGGTGCTTTCCCAAAGTTTCTTACATTTTCAAATGGTCCCACAAATCTGTGGGGTTTCCCCGTTTTTTACTGTACGTGTAGTTGTAGACCATGGAGTTTTAGGCTTTCTCTGTTTTACGCAACAGTACCTTTTAATGCTTTTTTAAGATAACGAAAATATAACTTTGAGTCTCTTTGTCAAATAGGGTTCGTGTAATCATTCACGTTCGTATAATAAATTAATTAGGGTCGGTTTAGAAAGCCCACAAATAAAAGTGAAAAACCTTGCCAGCTAAAAAAGAAATAAACCATCTGCAATTGGAAACAAAGAATCCACGTGGCCATGACAGCTACACAACAAAGAAGTGATGAAGTTTTAGCCTTTTATTGAGTACTTATCTACTCCTATTTCTATTATAAATTTGTTGATTAAACTTTTTGATCTCCAATAGGAATACTCTGACTGAAACTTCCAATGATTGGTCTCTGTTTATTTTTCTTACCCACTCAGTCCCACGAAGACTTTACTTTTAGATTTTTATGTCCAACGTTTGACTATCCGTCTTATTTAATTTTTTTTTAAAAAAAATAAAAAAATAATCATGCATAAAGTATTATTCAAGTTTTATCATCTAATAACAATAAAAATAGTAATTATAAATTTTTTTTAAATAAGATAAAAAGTCAAACGTTGTATAAAAACTGAAAAATGAAGTCTTCGTGAGCCGGAGGAAGTACTACGGTACTAAAAGGATTCTTCTACTTGGTCCTTTTCCATAGCACAACACGTCACAGGAAGCAATCACTTCCTAATTAACTACTCCAGCATAATATAGTAACAAGATTGTGACAGTCTGAAATTTAAAAGAAAATTTTCACGAACATGGTGTTTGTACATAGTAGTACACCAGGTTCATGTGGATAGCTCTGCTCATTTGGCTTGTAAAACTGTTGAGTGTATGGCAGTGACATCCTCAACGACAACTGGAGAGATTCGCCAAGGTCCGTGCTTCCTATCTACCATGAGCTTATTGCAGCTGGCCTAAGAATATGGGTCTTCAGGTCAGTTTCCTGCCCCTTTCTTAACTTATTTATTCTTCATGCTGACAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018407