BGIOSGA018410

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Revision as of 02:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018410| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018410, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA018410

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018410, complete gene.

LocusTag

OSJNBB0069G11.6

Ensembl Transcript ID

BGIOSGA018410-TA

Ensembl Protein ID

BGIOSGA018410-PA

Length

8822

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12031398..12040219

Sequence Coding Region

12040145..12040219,12032741..12032917,12032549..12032632,12031917..12032162,12031398..12031643

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12031398..12040219 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12031398..12040219 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTTTCCTGCTGAAGACTAGGAGTGAATCTGACAAGCCGAAGTCGCCATCTTCTGAAGAACTGCAGCAAAAGATAGTTCAAGTCCGGGAACTCCTGGGAAGCCTGGCAGCTGAGATGCCGGCATTCTTATCAGACACCACCATCCGCCGTTTCCTAAGGGCAAGGAACTGGAGCACGGAACAAGCAACCAAGTCGCTCAAAGAAACTGTCAAGTGGAGGCGTCAGTACAGGCCAGAAAGCATTTGCTGGGAGTATGAGGGTAGGAGAGCATATATAGCTGACTACCTTGATGCCAAAGGAAGATCTATACTAATCACAAAGCCGACAATTAAGGGGAGAGTTTCAGGGAAGGAGCAGATAAAACACTTTGTATATCTCCTGGAGAGTTTGGCTATGAACTCTGCAGATGAACAAGAAGAACATGTTACTTGGCTGATAGACCTCAGAGGCTGGAGTATATCAAGTACGCCATTATCGACATCCCGTGAATCCATGCACATAGTTCAAAACTACTATCCAGGGATTATTGCAGTAGCAATACTCAGCAACACTCCAAGGATTTTTGAATCTTTCTGGAAGATTATAAAGCACTTCTTGGAAGCAAAGATGAGCGAGAAGGTGAAGTTTCTATATACTAACAATCCAGAGAGCCACAAGATAGTGTCTGAAATGTTTGACATGGATCTGCTGGAGACTGCATTTGGGGGCAGAAATTCAATTACCATTGATATAGACAATTATGCTGAGAGAATGAGGAGATCAGATCTTGCGAGAGGAGTTTTAATCATCCAAACGGACATAAATCTGATTAGTCGACATCACTGA</cdnaseq>

Protein Sequence

<aaseq>MSFLLKTRSESDKPKSPSSEELQQKIVQVRELLGSLAAEMPAFLSDTTIRRFLRARNWSTEQATKSLKETVKWRRQYRPESICWEYEGRRAYIADYLDAKGRSILITKPTIKGRVSGKEQIKHFVYLLESLAMNSADEQEEHVTWLIDLRGWSISSTPLSTSRESMHIVQNYYPGIIAVAILSNTPRIFESFWKIIKHFLEAKMSEKVKFLYTNNPESHKIVSEMFDMDLLETAFGGRNSITIDIDNYAERMRRSDLARGVLIIQTDINLISRHH</aaseq>

Gene Sequence

<dnaseqindica>1..75#7303..7479#7588..7671#8058..8303#8577..8822#ATGAGTTTCCTGCTGAAGACTAGGAGTGAATCTGACAAGCCGAAGTCGCCATCTTCTGAAGAACTGCAGCAAAAGGTAGGAATAACTTACCAGTGATCCTTCTGTATAACTTATAGGTCATGACAAATAACAAATGCAGTAGAAGTTACTGCTTCAAAAGCATTAGCCATTTAGCATAGCAAGAAAACGAACGGGGCAAAGAGAATTGGGGTAGTGATTGTTTCTTGCGTAAATTAATTTCAGCAACATCCCATTTTTTATGGTCGAAGTATCACGTATAACTCCAAGTATATGGTTTTGAAGTTTTGTTAAACTAGTTCAACCCCATGCAAGTTGAGCATGCATTTACTTCAAATTTTTAAATAGAATATACATAAATATTTTAATTACTGATTTCTTGTTTACAGCTAGCTGTTGGGTTAACTCTTCACTGCTTTGAATTATTTTATTTCAGATATGCTAATATCAATTGAGATTTGCATAGGGTTTTAAGAAGCATTAGACCATACGCTAGGTTCATAATATATATAGTCTTCGGGAAAGACTAAAATCGGCATCCGATTTTTCCGAAAAAAATTGGACGTTGTTTTGCTACTCAAAAAACATGTGTCAAATGATTAAAACAATGAAACAAATTTGAACAATTACCGAAACATTTTAGTATAATATATGAAACCTCAAGGTTCAACCACCAACAAATCCGCATGAATCAACAACAAACTTACAGAGCACCTTGAAAAACCACATTGCAACATTTCGATTCAATACAAAGAAACATCAAGTTACACCAGTTGAAAAATCAAAAAATCACGCTCGTTCACACTATTCTCGTGCTTCTCTCCAGCGCGCTACCAGCGGTGAGCCATTGATATCCACGCCGACCTCCTCGAGCATGAGAAACGAAGAAGAGCCGTTGCTGCCTAGCTATATTGGTGACCAGAGGTCGCCGCATGCCATCGCCTTCACAGCATTTGATGCCGGTCACCATGTTGTTGTCGAGCGCCATCCCCTCCCTCTCCATGAGCATCTTCTATGGATGCTAAGGTGGGCCACGTGCTCAGGACGTACAGGGAGAGAACATGAGATGAGATATGGGTAGAATGAATGAACAGAGATGGATGAAAGTAAGGTTTTCTCTTTTTATCTATAGATTGAATGGGGGAGATGCGATGGCCCAAATGCGTGCGAATGTGGGCGCTGGATTTTTGGGCTCATGCTGGCCGCTTGCGTGGGAGATTTAGGGTGCGCTTTCAGTCTATAGGATTAGATTCTTATCGTTTTTCGTTAGCACGCTTTTCAAACTGCTAAATGATGTATTTCGTGGGAAAACTTTCTATAAAGAAGTTGTTTAAAAAAGTCCAACAAATTTATTCATCAAAAATTTATATATTAATACTTAATTAATTATATGTTAATCACATTTCTCGTTTTACATTCGGCTAATCAGCCCATCCTATCTACTGAAACGAGCACACCCTTATTCTAGTCTTCTGCAATTTTTACTATAATACATAGGGTTTCTAAAATTTACACTTAAATTAGACATAAAAGAGCCCTCCGGTGCAGTGATGTGCACATTTATCTTTTACTTTTGGAATGGTGACATCTTGTCCGCGTATTTCATTTGTTATTGTCCCGAACTTCTGCAAAAGACCAAAAGAACCTCGGCATCATTAAAATCTAAACGTTCAAAACCATCCAATTTTCAACCTTTTTGGTTTGGATTCACTACCAGAAAACTTATCTTTTTATCTAATACCCCAAACCACAACTACACCGGATATATTAAGAACCAATACTAAAAAACTCTTTAGTACCGGTTCTAAAAGCCCAAGTCTCCGAAATATATTTAGCACCGGTTTGTGTTATCAACCGGTAATAAAAATACATCTTTAGTATGGGCTGGTAACACTAACCACGACTAAAGTTGTCTTTAGGGTTAGTTAAAAAGAAGCATCACTATCCAAGTTAGACGTGTGTAGTAGGTGGGATGGTAACGTGTGTGAAAGGCTGAGATCATGAGAGATCTTGAGTCTAAATCTCACATCCCACATATTTTTTTGCCTTAGTATATATCTTTAGTACCGGTTCATTCTACCGATACTATAAATTAAATAAAGAACCGGTACTGAAGATCATATCTCTCCTAGCGATTAACATAACTCTTGATAGTGATTAACAAATATAACTCTAATTTAGCGATCACGCATAAGGATGAAAGCAATTTCAAAATTTCAAAATTAATAAATGACTTCAAAAACTCCTAAAAAATTACCCTTGCTATAAAGTATTTATATCCTACATAAATGTGTGCTTAAATCTAAAAAAATTTTATTCCTACAAGACAAATAAACTTTTTTTGTTCTAGACAAATTTATGTGCATCTTAAATACGGTTTTGTGGAATTTCTATGAGACTATTTCAGCTGTAGGAATGCACTGTGTGAGAGGCACAGGTCACTGGTGGAGAAACCTTTTTTACTCCCAGTTGGTAACCCCCTTTAGTCCTGGATTTCCAACCAGGAGTAGGAATCCGGGACTAAAGATGCCCATCTTTAGTCCCGGTTGAAATAACCGGGACTAAATCTTTAGTCCCGGTTGGTAGCAAAAACCGGGATTAAAGAGAAAGTTCTTTACACCAACCAGGACTAAAGAGGGATAGCGGCAGTCTAGATGGTCCCTTTTCTTTTTTCTTGTTTCTTTTTTATTTTCTCCCGAATCGGGTGGCATTCACATCCCAAATCAAACCCCAAATCCCCAAATCAAAGTAACATCCCAATCCACATCACAAATCTTAAAGTTACTAACATACACAAATCAAATACATCACAAATCCTAAAAAAATTACACACAAATCAAATACATCACAGACTATACATCTCAGACCCATACAATCCATCACAAAATTATACATATTAGTGAATCACAAAATATATAAAAAAAAGAAAAAACAAGCTCCAATCACGGCGCCACTACTACCGCGCGCGCCGTGCAACCGCACGTCACGCGCCCGTCTATCCACCACGCGTCCGCGCGGCGCGCAGCCTCCGTCTTCAAGGGAGGGAGGAGGAAGGGGAGGGGAGGGGAGGAGGAAGGGGAGGCCTGGAGACGGAGGAGGAAGGAGGGCCTCCGTCTCCAGGGGGAGGGAGGAGGAAGGGGAGGAGAGGGGGAAGGGGACGAGGAAGGGGAGGAGGGCGTCCCTCTCCAGGGGAGAGGAGGAGGGGAGGGGAGGGGAGGGGAGGATCTGAGTGGTTGCGATTGTGGAGGAGAGGATAAGGGATAGGGATTATATACAATGTGTTGAATTTTACTCCCGGTTGGTAATACCAACCGAGAGTAAAGATCTACATGAACCAACCGGGAGTAAAGTGGCGATCTTTACTCCCGGTTGATGTCACCAACCGGGAGTAAAGATCCTCGCCCCCTGACATGCCTCTGACACGGAATGAACCAGCACTAAAGACCATATTTAGTCTCGGTTGGTAACAACAACCGGGATTAAATATCATATAATAGCTGTGCGGTTTTCAACCGGGGCTAAAGATCATTTTTAGTCCCAGTTCTTTTTGAAACCGGGACTATTGTGGTTTTGGGTCGACCCAGCAAAGATCATTTTTCCAGTAGTGGGTGTGGTGCACATAAACATGGCAAGCGGAGAAGGTTCAGAATTCTAAATCCTTTACATATGTATAAAATATTCCCATTTGGATCTAACCCAACCCACGAAGTTTTTGCATCCAAACACTTAAAAAAAAGGATAAGATGACACTAACCCAACTCATCAAATCCATCCTACCAAACACATCCTTGGTCATTGGTCAAGGCAGAAGTCCTATATTACACGCTTTAGCCATGCAGCAGCCAGCTGGTTTTATATCGGACTGCTCATCGTAGTTCGAGCTAGACTGATATCGTAAAAAATAACGAAGCATCTAAAATCATTGATGCATAAACTTTTATATTTATATTGTTAGCAGTTTCAAACCAATGCTAAAATATGTACTATGATAAACAAAATTAACTAAATTTAACTTTTACATTTTGACTGCAACAGATAATCCTTTTGGTTTAGATTTCCCATGCCACATAAAACAATATAAGATATTGATTATTATAAGCTTTTTCATTTGAATTTTTAAAGAAACTTTTATATCATAAGTTTTTTTAATAAAACACACCATTTAAAAGTTTAAAAAGACTGCTAACAGAAAATGAGAAAGTTATTGTTTGGAGTTAAAAAAATCGAAGCCCAAGTTGTACCAGATTTTCCACTTTGCAGTTCTTACTATACTACCAAACTGTTATGTTGTATTATACCCATTATACAAATCTTTTTTATTGGTGCAGCAAATGATCAAATATTAAATAAGAGGTGCAAGGGTCTCTTTGATTTGTATGAAAAATATAGGAATTATGGAGGATTTCAATCCTATAAAAAAAATTCCTATGAAGTCTTTTAAAACAATGATTGAATCATATTCTATCCTTTGAAATTCCCGTGGGATGGACAGTTCTATAAAGATTTTAGATGAAATTTAGCAAAAACTTCAACCTCACGAAAAAAATTTCTAAATCTAATTCTCTCGTCTGATTCCTACATTTTTTCTATAGTCCAATCAATCGGTTATTCATGTGTTTTTCTAAGTTTAATAATCTTCTATGTTTCAATCACAAAAATAGAAAAACAGAGAAATATGAAAAAAACTTAAAAGTTGCAAGAAATCAATAACTAGTTCAGGCAATCAACTCTGGCTACAAGCCTACAAGGCTACAACAGATGAAAACAACATGCACAAGTTATGTTTGGAAAACCACCGATCCCCTGCAATGCTGACAGATTCCTGGCTGCTGAGAGGGAAAGGAAGTGGTCACCTTTGCTGTAGCGCCACATGAAAGTGTTTACACCCAAATTTGGCACCTATGGACGAAATATGGAAAAATTGCCAAAGTTTGGAAAGTGCCGGGTTTACTTCACTAGGGCCGGTCAGACCACAGGTATGTGGGCGGTCTGACCGGCTAGTAGGGCCGGTCAGACCAATGGTATGTGGGCGGTCTGACCGGCTAGTAGGGCCGGTCTGACCGCAGGTATGTGGGCGGTCAGACCGTCAGGGTCCGAGTCCGAGTCTGTTTTCGTCGGGTCTCGGGTTTCCTTACTCGGGAAAGCATGTTTCGTGTTTCCATTGGTTTCTATCCCGAATTAGACGTGGAGAAGGGCCTGTAGAGGGCAAGACCAACCCCTATTTAAGGGACAAGGCCGGTTCATTGTAAAACCCCCGAATACAATTTATTTGAATCGTTCTTTTACTATGTTTTTTTGTATTTTACCCTAGTTTAGTCGATCTTTGTCGGTTTGCGCCGTAAACCGTCCGCCGCCGCTGCGAGAGTGCGACACCTCTTCGTAGGTTTGTCCTGAAAACCTTCCATTTTGCCCACGAGATGGGTAGCTATCCTCATATCGATCTAAATCGGACTAGAGGCTGATTTTGATCTCTAAATCGGCTCCGCTAGCCGGTTTAGCTGTTTTTCTACAAAACCCATCTTGATTTGGCCCTTTGGCTAGATCGAGGTGGTTGGCGACTCCATATCACCGCAAGGCGTTTAGGTGTTGCGATCGTGCTTGTCGACTTGTCAAAAAAGTTGCCAACAGAAAAGATTAGTAATACTAGCCGTTATAGCAGCAAGTTATGTTGCGATGGTTCAGGCAGACAGCTACATGATTCACAGTACATCTGAAATTCGGTGAAGTTCGGCAAGTTTTTTTGTAGAGGGCCTGATGACTGTAGTCCAATTTCTAGTATGAAAAATAGAGCCCAACAAGGTTTTCCAGCAATTTACGACTCATATATTCCTATAGCATGTGGATTCTCGTGTGTTTCTAACATATAATTCCAGATGATAATCGTTAAAAATCACATCTAAAAGTAATAAATAGTTAAATATCTCTAATTTTGTAGTTAAAACTTATCACACAAGGGTGGTAAACGATAGCTGGGTTGAAACTGAACACAACCACTTATCCATAGGAGTGCGTTGTCATTCGCAGGGGTGGATGAAATGTTTTCCATAGACCGAAATATTTTTACCCTATAAAATATTTGAGGACTAGGTAAGCTCATGAAAAAACCCATTACCACCACCGGTCATCCAGTGATATTATGCCATGCATAAAACAGAAATTTTGACCACTAACCCTTAAGCCAAACAGCACCATATATACACTTTTAATAGTCCCTAGCAGTGGCAGTGAATCTGTCACCTATATATAACTGTTTTTACAAATTGGCTCCTGAATATTATGGAATAGCATAAATATTTCGTTCAAACAATTAAAAAAGTTGTACTAACATATTTGACAATTTTTTAATATTATATTATATTTTATCCATAGCAAATCATTGGTATTTTTCTAGTGAACCAAAAAGCTCCCAACCACAGTAGACTTCATCATTTCACTTATTGACGGAATAAGCGAAACACCATATTTGCAAACGGAAAATGGTTTGTAAATAAAACTTTTATATACATGTTCTTAGCCATCTAAAAGTAAAGGTTGAAAAATAAACTACGATGAAAACCCTAAAATCAACTCCAAATTTAAGGTTGAAAATTTAAATTTTGTCTTATAAGAACAAGTATAATCCAAAATATAGGACTAGCATAGCATGGCACAAAGGGTTTGGTTAGCCAGAAGGCACGGTGTGGTGGTACAATGCTGCCACGTCATAGTCAATGGGCATAGCATCACTTTACTACTATGGAATGTCCAGCTTCATGGACTATTACAATATGACTATTTTTGGAATTTCAAAACATAAAAACAAAAATCTTAAACCAGTATTAAGGCATGTACAACAGTGCTTAATTATTAACAGGCTCTCTCCGTTACTATGCAAGTAAATTTGGAAACATGGAAGGCAGAGAGAAGAGGAAAAAGAAACATCGTTGTAATGCATGACAACATCTTAGAGTCGACTCTTAGCAATTATTAAATAAAATTTTGTTGCATGTGGATGGAGAAAAGGAAACAAGAGTAATAAAAAAATATTTTGGTGCATTAGTTGTTAATATGTTTTCTTATGTCAACAATTGTTGCCCCTAGGATTTCTTTTTTGTTCTTCTCGTGACTTGCCACTAGCATTTTCATGTGAGTTCTGACTGCTTTTTGATCCAGATAATTTGTAGGGCAGGTTGTAGTTTTGGGCTGTCAATACCAACTCCTCCTTCATATTTTCACTTCTATAGTTATCGTCTAAACCTTATCCCTAAATTAAACTATTTTGTTCTGGTTGATGTGCACCTGAAGATAGTTCAAGTCCGGGAACTCCTGGGAAGCCTGGCAGCTGAGATGCCGGCATTCTTATCAGACACCACCATCCGCCGTTTCCTAAGGGCAAGGAACTGGAGCACGGAACAAGCAACCAAGTCGCTCAAAGAAACTGTCAAGTGGAGGCGTCAGTACAGGCCAGAAAGCATTTGCTGGGTGCTCTCACAAATCCCAAATCAACCCCTTTGTTGAGTTTGTACCAATTGTTTTTTCTAAAGCATAATTGTTTGTAATTATTATGTTTTGGACGACATTGCTGACAAGGAGTATGAGGGTAGGAGAGCATATATAGCTGACTACCTTGATGCCAAAGGAAGATCTATACTAATCACAAAGCCGACAATTAAGGTCAGATTTTTGCTGACTACAGGATATATATATGCCGGTCTGACTGTGATAACAATCCACTAGTAATTTGGAGCAAATGAAATGATTCAAGTCCCCGGTTGAAAAAACTAAAGACGTTCTCGAAGAAAATCAATGAATACTAACAGGATACAATGCCAACTTAATTAGGTGACTGAAAGTTAACTTTTCTGTAGAATTCAGAACCTCAGACTTGCATGACTACAAAATAAAGTTATATTTCTGCAGTTCTCTTACCAACAGATTACCATACTAGGGGTGGCAAAAAGTGCTGTTCTTACAGTTCAAGTTGAATACGGTTTTTATTATGTATGATGCGTTTATGGACAATAAAATTTTGAAGGTTTCTAATGTTGACGAATTAGCAGGGGAGAGTTTCAGGGAAGGAGCAGATAAAACACTTTGTATATCTCCTGGAGAGTTTGGCTATGAACTCTGCAGATGAACAAGAAGAACATGTTACTTGGCTGATAGACCTCAGAGGCTGGAGTATATCAAGTACGCCATTATCGACATCCCGTGAATCCATGCACATAGTTCAAAACTACTATCCAGGGATTATTGCAGTAGCAATACTCAGCAACACTCCAAGGATTTTTGAATCTTTCTGGAAGGTACTATGCAATATTCAGGACTTCTATTTACTCTTACTAAATGATGTTCTGTGATTTAGTTAGTGAATATATGTACTACCTCCGTTTCAGGTTATAAGACTTTCTAGCATTGTCCACATTCATATAAATGTTAATGAATTTAGTCACACATATATGCTTACATTCATTAACTGGTAATAATTAACATATCTATGAATGTTGACAATGCTAGAAAGTATTATAATATGAAACGAAAGAAGTATGAACTAGTAGTTGTCTTGTCCTCATTTGCAGATTATAAAGCACTTCTTGGAAGCAAAGATGAGCGAGAAGGTGAAGTTTCTATATACTAACAATCCAGAGAGCCACAAGATAGTGTCTGAAATGTTTGACATGGATCTGCTGGAGACTGCATTTGGGGGCAGAAATTCAATTACCATTGATATAGACAATTATGCTGAGAGAATGAGGAGATCAGATCTTGCGAGAGGAGTTTTAATCATCCAAACGGACATAAATCTGATTAGTCGACATCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018410