BGIOSGA018414

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Revision as of 02:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018414| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018414, complete gene.| tag = OsI_192...")
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Gene Name

BGIOSGA018414

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018414, complete gene.

LocusTag

OsI_19220

Ensembl Transcript ID

BGIOSGA018414-TA

Ensembl Protein ID

BGIOSGA018414-PA

Length

5592

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11676778..11682369

Sequence Coding Region

11682359..11682369,11682227..11682298,11682075..11682146,11681116..11681187,11680785..11680856
,11680264..11680335,11680112..11680186,11679778..11679843,11679617..11679682
,11679502..11679546,11679348..11679412,11678889..11679259,11677831..11678041
,11677456..11677661,11676778..11677110

Genome Context

<gbrowseImage1> name=IndicaChromosome05:11676778..11682369 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:11676778..11682369 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTGTCAGGAACTTATTCCGTAATTACTTGACTGGTCCCATTCCGTCGTTCATCGGAAAATTTACTTCAATGCAATACTTGTCATTATCTTTCAATCCACTATCTGGACTACTTCCAAAGGAACTAGGAAACCTCACCAATCTTCTTTCATTGGGCATTAGCTCAGACAATTTTACAGGAAGTCTTCCAGAAGAACTGGGTAACTTGACCAAACTTCAGCAATTGAGTGCATCAGATAATGTATTCAAAGGGAAAATACCTGCTTATTTGGGCACAATGACTAATTTGGAAGACATATGGATTGGAGATATTATAAATGGGGTCTCTCCGTTGGCATTTATCAGTAATATGGCATCCCTGAGCACACTAATATTGAGGAACTGCAAGATATCTAGTGATCTCGGAGCAGTAGAATTTTCCATGTTTAAACAGTTAAAATTGCTGTTTCTTGGGAACAATAGCCTTACAGGAAAGTTGCCGGATGGTATAAGCTCTTCATTAAAAGTGATAGATTTTTCGTACAACCAACTCACTGGGAGCATTCCTTCTTGGGCTAGACAAAACAATTTACAGTTGAATTTGGTGGCAAACAACTTCTTACTCGATACCACCAGTGAAAGTACGCTACCTTGGGGAATAAACTGCCTCCAACAAGACACCCCTTGTTTCCGTGGATCTCCAGAATATTATTCCTTCGCAGTTGACTGTGGCAGTAATGCATCCATAAGAGGCTCAGATGACACTATTTATGAAGCAGATCCTACAAATCTTGGAGCTGCAACATATTATGTTACCGGTCAAACAAGATGGGGTGTCAGTAGTGTAGGGAACGCCATAGATGCAAAGAATATTATATATAGCTCCCAACCTTTTCAAAATGTAGTTGATTCAGAGTTGTTTGAAACTGCAAGGATGTCATCATCATCTCTGAGGTACTATGGACTTGGACTTGAGAATGGAAATTACACTGTTTTGCTCCAATTCGCAGAATTAGCTTTTCCAGACTCACAGACTTGGCTAAGCTTAGGGAGAAGAGTTTTTGACATATATATCCAGGGTAAGCTACCTGATGAAAGAGTTATAGCTGTGAAGCAACTTTCACAATCATCTCATCAGGGAACAAGCCAGTTTGTGACAGAGGTTGCGACAATTTCCGCTGTGCAACATCGAAATCTTGTGATATTGCATGGATGCTGCATTGATAGTAAAACACCCTTGTTGGTTTATGAGTACCTTGAAAATGGAAGCTTAGATCGAGCAATCTTTGGTGACAGTAACTTAAACCTAGACTGGGTAATGCGCTTCGAGATCATTTTAGGAATAGCAAGAGGGCTAACTTATCTTCATGAGGAGTCAAGTGTACGCATTGTGCATAGGGACATCAAAGCTAGTAATGTTCTACTTGACACTAATCTCATCCCAAAGATCTCGGACTTTGGACTTGCCAAACTCTACGATGAGAATCAAACTCATGCATGGGGCCTGTATGAAATGGATCAAGCACTTGGAATTGTTGACCCAAGTCTCAAGGAATTTGACAAGGATGAAGCTTTTAGAGTCATATATGTTGCACTTGTCTGCACTCAGGGCTCTCCGCACCAGCGACCGCCAATGTCGAAGGTCGTGACAATGTTGACTGGAGATGTCGATGTGGCTAAGGTGGTCACCAAGCCAAGCTACATCACTGAGTGGCAGCTTAGGGGTGGTGGGTACAGCAGCAACACCACTAGCAGCTACGCATGGTCTAGCAACCCTGAGTTGAGTAGGCAAAAAGAGATCACTGAAGTTTCTCTCCAGGTGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MLVRNLFRNYLTGPIPSFIGKFTSMQYLSLSFNPLSGLLPKELGNLTNLLSLGISSDNFTGSLPEELGNLTKLQQLSASDNVFKGKIPAYLGTMTNLEDIWIGDIINGVSPLAFISNMASLSTLILRNCKISSDLGAVEFSMFKQLKLLFLGNNSLTGKLPDGISSSLKVIDFSYNQLTGSIPSWARQNNLQLNLVANNFLLDTTSESTLPWGINCLQQDTPCFRGSPEYYSFAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAELAFPDSQTWLSLGRRVFDIYIQGKLPDERVIAVKQLSQSSHQGTSQFVTEVATISAVQHRNLVILHGCCIDSKTPLLVYEYLENGSLDRAIFGDSNLNLDWVMRFEIILGIARGLTYLHEESSVRIVHRDIKASNVLLDTNLIPKISDFGLAKLYDENQTHAWGLYEMDQALGIVDPSLKEFDKDEAFRVIYVALVCTQGSPHQRPPMSKVVTMLTGDVDVAKVVTKPSYITEWQLRGGGYSSNTTSSYAWSSNPELSRQKEITEVSLQVR</aaseq>

Gene Sequence

<dnaseqindica>1..11#72..143#224..295#1183..1254#1514..1585#2035..2106#2184..2258#2527..2592#2688..2753#2824..2868#2958..3022#3111..3481#4329..4539#4709..4914#5260..5592#ATGCTTGTCAGGTATTCATCATTATTTTTGTGTTGGCTAATTGTTCTAGTTTATTTTTGTGATCTTTTCAGGAACTTATTCCGTAATTACTTGACTGGTCCCATTCCGTCGTTCATCGGAAAATTTACTTCAATGCAATACTTGTATGAGTTACATGTTTGTTCTAGATCATGTTCCATCTATTGGTCGTTGTTTTTTTTTAATTATTGCTAATCATCTCAAGGTCATTATCTTTCAATCCACTATCTGGACTACTTCCAAAGGAACTAGGAAACCTCACCAATCTTCTTTCATTGTAAGAAATCTTTTCTCACATGTGGATTAATCTTCCACTGCTCCCTCTGCTACAAACCACTCATCCTTTCAGCTTTAACTGTCAATTCCTAGCAGTTTTCACGCGCGTGCGCGCACATATATATAGAGAGAGAGTTGAACTTATGACTACGAATCTGAGCATAGCTTATGTGTAAATTGTTAGCTAGAAGTTGTATTTTTTTTTACGGAGGGAGTACGAACTATAAATTATGAAATTATTTCTCATGTTGAATCTAAATGTTAAACTATATAAATATGTAAAAATGGATGGTTAGAAATATAATGTTTGACTTACAACAAAAGTAGAATGACAGATAATATGAAATGAGTGGAGTATATATTTGGACTGCACGAACTAATATAATAATACATGAAATAGCAATCGCATAAGTTCTACTTCCCCCGTCCCATAATAAGTGCAGTTGTGGGTTTTAGTGCTCAACATTTGACCGTCCGTTTTATTTGAAATATTTTTATAAATAGTATTCTAATTGTTATTAGATGATAAAATATGAATAGTAGTTTATGCATGACTTATTTTTTTAAAAACAATCATAATTTTTTCAAATAAGACGAACGGTCAAACGTTTGATACAGAAACACTTATGGTTGCACTTATAATGGGACGGAGGGAGTGATAAAAAAGATCAAAACTACTACTAAATAGGATGTAATAGGCATGTCAGTGTAACTCCTGCTCATGTGGTGCTTCATATGATCAAGTAAGATTGAACAGCAAATACTTGAACATATTGTAATGATGAATATTGTGGGTCCAATGGCACATCAGGAAAACTATGCCCCTTTTGCTATTAGTTGATGACAAAAATTTTTTGTCAGTCCTGAAATATTTCATTTTTCATTTAGGGGCATTAGCTCAGACAATTTTACAGGAAGTCTTCCAGAAGAACTGGGTAACTTGACCAAACTTCAGCAATTGTAAGATACCCCATTGATTTCTAACTTCTTATTTCTACTTGTAAAAGAACTAAATTTGGAATGGTCATATCTATTGTCAAACATGATAATATTTCAAACTTTCAATAACAGGTACTTTGATAGTTCTGGATTCAGTGGTCCGTTCCCTTCATCGTTCTCAAAACTTCAGAACCTGAAGTTCTTGTATAGTCAAAAACATAGCCTCAATTATTATATTCGTCATGTTTTCATGCTAAATGATATTTTGGTCTGCTTGCAGGAGTGCATCAGATAATGTATTCAAAGGGAAAATACCTGCTTATTTGGGCACAATGACTAATTTGGAAGACATGTAAGCTTGTTAAGATATCATTCGTTCTTACTGTTCAGAGATAGATGAATCTGTGCAAGATAAATTACTGTCTGTATATCACATTATCTCCATTCAGACTTAAACAAAAGCATTTTTTCACATTTCAGTCCTCACTCAATATAAATGCAGATATCTGCATCACAGTAAGCGGTCCACATGGCATGTTCATACCTAGAGATCTTATTAAGAATGCTCACACAGAGATTTTTTTTCTTACTTTATAAAGGTTGAATGTCCCTAACTTTTTTTCTAAAATAATGAGCTTGTAGTGCTTTCCACGGAAACTCCTTTGAAGGACCAGTCCCAGAAAGTCTGTCTAATCTGACCAAATTAACAAGATTGTAAGTATACTCTTTTTGTGGCATGAACTCTTGAAGGTTGACAATGTCAAGGCTGATAACTAATTTATGAAAAACTCAAATGAGCAGATGGATTGGAGATATTATAAATGGGGTCTCTCCGTTGGCATTTATCAGTAATATGGCATCCCTGAGCACACTGTATGTGATGCTTTTAGCTATAAAGCTTACAGTATTGTCTAGTTGCAAGTTACCAAGGTTGTATTTCCTCGTTACAGAATATTGAGGAACTGCAAGATATCTAGTGATCTCGGAGCAGTAGAATTTTCCATGTTTAAACAGTTAAAATTGCTGTAAGTTTTCAATTACAGGCCATGGTGCCAACTGATGACGTTATTACTCATTTCCTCATGTTGTGTACCATATGTTCAAGTAATATGATAGTCATGTGGCACAGGGACTTGAGTTTTAACAATATCACAGGAGAAGTTCCTCAATCCATCTTGAATTTGGGAAATCTCAATTCTTTGTAAGAAATTCTTTCTTTACATCAATTTGTTCATACGAGCCTGTATTAAGCAGATGAGTATATTTTATAATCTTGAACTGTGCCCAATTCAGGTTTCTTGGGAACAATAGCCTTACAGGAAAGTTGCCGGATGGTATAAGCTCTTCATTAAAAGTGATGTATGTCAAATACAATTGACATGGCAGTATAGCACAAACTACATTCATAATAGTACGCACTAATTTTGTATAACATAATTCTGGAATGTTGACAGAGATTTTTCGTACAACCAACTCACTGGGAGCATTCCTTCTTGGGCTAGACAAAACAATTTACAGTTGTAAGTGTAAAAGTGTGATATTTGTGTCGCTGAGAAAAAATATAAATACTAATATTCTGTTTTTTGAAAGGAATTTGGTGGCAAACAACTTCTTACTCGATACCACCAGTGAAAGGTACTTGTGACATTTAGTTCTAATTTGGCGAGTGAACTATATGAAAATCTTGCTGGTAACTTTAAATTTTCAATTCAAATTGTGCACAGTACGCTACCTTGGGGAATAAACTGCCTCCAACAAGACACCCCTTGTTTCCGTGGATCTCCAGAATGTATATTTCTCATTCTTCATAAAACTAAACAGTAACATGAACTTACGAATTTGAATGATGGCTACAATTTTTTTAATCTTAATTGCAGATTATTCCTTCGCAGTTGACTGTGGCAGTAATGCATCCATAAGAGGCTCAGATGACACTATTTATGAAGCAGATCCTACAAATCTTGGAGCTGCAACATATTATGTTACCGGTCAAACAAGATGGGGTGTCAGTAGTGTAGGGAACGCCATAGATGCAAAGAATATTATATATAGCTCCCAACCTTTTCAAAATGTAGTTGATTCAGAGTTGTTTGAAACTGCAAGGATGTCATCATCATCTCTGAGGTACTATGGACTTGGACTTGAGAATGGAAATTACACTGTTTTGCTCCAATTCGCAGAATTAGCTTTTCCAGACTCACAGACTTGGCTAAGCTTAGGGAGAAGAGTTTTTGACATATATATCCAGGTAGAAATTTTGTGCATTTTATATAATGTTTTTCTACTGAATCTTACCAATATTTATCTAAAAGTATTACTGATATTTACATAGGGTGCTCTAAAACAAAAGGATTTCGATATAAGGAAAACAGCAGGTGGAAAATCTTTTACCGTAGTTAATAGGAGTTTCATGGTAACTGTGTCTAAAAACTTCCTTGAGATCCATCTATTCTGGGCTGGCAAGGGCACTGTTGACATACCTACTAAAGATAATTACTATGGGCCAATGATCTCAGCATTGAGCGTCACTCCAAGTAAGCACCACACTAAAACAACAGCAGGAAGTGTTATATTCGCTGCCGATAAATAATATTTTTCCTTTGCAGATTTTACTCCTACCGTTCGAAACGGCATACCAAAAAGGAAAAGTAAAGCAGGTGCAATTTCCGGAATATTGATTGGTGCAATAGTTTTAGTATTAGCAGCATTATTTGGAGTGTTTACACTAGTAAAGAAGCGGAGAGCATTGGCACAACAGAAAGAAGGTATTATATATCAGGACATATATAATTCAAACATCAAAATTATCTGGTTTACTCTTCTCATCTGTGCTAAAAATAACATGCAGAACTATACAACCTGGTTGGACGACCTGACGTTTTTAGTTATGCTGAGCTAAAGCTAGCCACAGACAATTTCAGTTCTCAAAATATTCTAGGCGAAGGTGGATTCGGGCCAGTGTATAAGGTTCTTTATTTCCATAATTAATTATGTACAACTGCAGCTGGTTATAAATTTATCTGATTTGGCATTGAAGTGCTGTGTTTTAGCAACATTTGTCTATGCTCAAAATACACATGTAAAAACCTTGGCAGGGTAAGCTACCTGATGAAAGAGTTATAGCTGTGAAGCAACTTTCACAATCATCTCATCAGGGAACAAGCCAGTTTGTGACAGAGGTTGCGACAATTTCCGCTGTGCAACATCGAAATCTTGTGATATTGCATGGATGCTGCATTGATAGTAAAACACCCTTGTTGGTTTATGAGTACCTTGAAAATGGAAGCTTAGATCGAGCAATCTTTGGTGAGTTCACTTCTGTAAAATTGCCGCCCTCGGCACTTATAGAATTGTATTTTCTTTCTACACAAATAAAACTCATTGCTTCGTGACTAATAATTAAGGATTTTTCTTTTCTGCATCTTTGTTATAATTGGCATTCCTGATGATAACTGAGCTATTTCTGCTTGTAAAGGTGACAGTAACTTAAACCTAGACTGGGTAATGCGCTTCGAGATCATTTTAGGAATAGCAAGAGGGCTAACTTATCTTCATGAGGAGTCAAGTGTACGCATTGTGCATAGGGACATCAAAGCTAGTAATGTTCTACTTGACACTAATCTCATCCCAAAGATCTCGGACTTTGGACTTGCCAAACTCTACGATGAGAATCAAACTCATGTGAGCACTAGAATTGCAGGCACATTGTAAGAATGTTTTACCACTTATCTTCTTATGATTATAACATCAATATGAATGCTACTATTAACTTGTCTTATCATTTTTAAGGGGCTATCTAGCTCCTGAGTATGCAATGAGAGGCCATTTGTCAGAAAAGGCTGATATTTTGCATTCGGAGTGGTCATGTTGGAGACTGTCGCTGGGAGACCAAACACCGACAACTCCCTCGAGGAAAGCAAGATCTGTCTCCTTGAATGGGTATGCTGGTCTATGTTCTTCCCATACTAGAAAACTTCAATTCATTGTAAATTGCCTTTTGCTTACTCAAACTATGTTTATCAAAAGGCATGGGGCCTGTATGAAATGGATCAAGCACTTGGAATTGTTGACCCAAGTCTCAAGGAATTTGACAAGGATGAAGCTTTTAGAGTCATATATGTTGCACTTGTCTGCACTCAGGGCTCTCCGCACCAGCGACCGCCAATGTCGAAGGTCGTGACAATGTTGACTGGAGATGTCGATGTGGCTAAGGTGGTCACCAAGCCAAGCTACATCACTGAGTGGCAGCTTAGGGGTGGTGGGTACAGCAGCAACACCACTAGCAGCTACGCATGGTCTAGCAACCCTGAGTTGAGTAGGCAAAAAGAGATCACTGAAGTTTCTCTCCAGGTGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018414

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018414&oldid=47170"