BGIOSGA018423

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Revision as of 02:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018423| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018423, complete gene.| tag = OsI_191...")
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Gene Name

BGIOSGA018423

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018423, complete gene.

LocusTag

OsI_19186

Ensembl Transcript ID

BGIOSGA018423-TA

Ensembl Protein ID

BGIOSGA018423-PA

Length

5931

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11067392..11073322

Sequence Coding Region

11072986..11073322,11070692..11070858,11070468..11070565,11069443..11069629,11067392..11068519

Genome Context

<gbrowseImage1> name=IndicaChromosome05:11067392..11073322 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:11067392..11073322 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGCGATGATCGGCGATCCCATGTCAGCGACATCGGTGGAGGCGGTGTTCGAGAAGCAGCCATCGCCGGAATTCAGGGAGCTGGTGACGCCACGGGCCATGGCCGTGGCGGTGGTGCTCAGCGTCGTCATCTGCTTCGTCGGCATGAGGATCCAGATGACGGCCGGGATAGTGCCGGCACTCAACATGCCTGCCAGCATCCTCAGCTTCTTCCTCCTCAAGTGGCTCATCAGGCTGCTACAGAGTTGTGGCTTTCCCATGCTGCCATTCACACGCCAGGAAAATATGTTCCTCCTGACTTGCATCATCACCTGCCTCAACCTGGCCCTCACAAGTGGTTTTGCGACCAATATCATTGGAATGACTTCTACGGTGGCCAGATCACTTGCTGATGATCCAGATCCAAGAGATATTATGGACCATGTACCAATCGGAAAATGGATAGTATACCTATTCCTTGTTGGTATGACGGGAGTGTTAATAAATGTGCCATTTAACCAGGTCATGATTATTGACTACAAATTACTATTTCCAACAGGAACAGTTATAGCTCAGCTTATTAATAGCTTTCATACCCCTGAAGGAGCTTACGTAGCAAAGTTCTACTTTGATTTCTCTGCGACATATATTGGTCTGGGAATGATTTGTCCACATATAGTAAATTTTGGATTATTTTTTGGGGCCATCATCTCTTGGGGATTTCTATATCCTTTCCTTGAAACTAAACGTGGGCAATGGTATCAAACTGACAGCCCTACAAGTTTGAATGGACAAAATGGATACAAGGTGTTCATCAGTGTGACACTGATCATTACTGATGGGATGATAAACTTTCTAACACTCATCACTACAGCATCAATTAACTTCTATCAATTAAGGAAAGAGCATGATTTAGGGCTTGCCAACTATTTCAAGAAACACCCAAGCCTCAACTATGATGATCGCAAGAGGATTGAGGTGTTCTTGGCTAACCGGATCCCAATCCCTGTGCCAGTGGCAGCCTATATCACATGTGCAGCCATCAGCACGATTGCAATCCCAGCCATGTTCAACCAGATCAAATTCTACCATCTGGCCGTGCTTTACATGGTCATCCCAGTCGTGACCTTCTGCAACACCTATGCGACAGGGCTCACCGACTGGTCGGTGGCACCAACCTATGCTAAGTTTACCACCTTCGTCTTTGCAGCATGGATCGCCAAGCCTGGCGCTGTCGTGGCCAGCCTCCTTGCGAGCGGGGTGATCGTGGCGGCACTCCACATCTCGTCGCAAGCGATGCAGGACCTCAAGTCGGGCCACATGACGCTAACGTCGCCACGCGCCATGGTCACCGGACAGATCTTCGGCGTGGCCGTTGGCTCCATCCTCTGCCCATGCGTCTTCCTTGCCTTCCAGTCCACAACGAAGCCCAACGCACCGGTGGGTTCAAAGCAGTCCGATTACCCATGCCCTTTCGCGGGTCTATACCGCGCCATCGGGGTGATCGGCACTGGAGGGGTGAAAGAGCTGCCAAAGCACTGCATGACATTCTGTGTCGTTGCCTTCTGCGTGACGGTCATCATTGACGCTGTCGTGCTGGTCTCTCAGAAGAGGGGTTGGAGCATCCACAGGTACATCCCCAGCATGACGGTGATTGCGCTGCCGTTTTTCGCTGGCTCCTACTTCACCATCGATATGTGCGTGGGGAGCCTTTTGCTGCTTGCCTGGACAAGAATGAATGCAAAAAGTGCAGAGATGCTGTCATCGGCCGTTGCGGCAGGCTTGATATGTGGAGAAGGGCTGTTCACACTGCCATCAGCGTTGCTCAACATGTTCAAGGTGCAACCACCGATGTGCATGAAGTTCCTATCCGGTGGCGAAGAAGTTGAGGCAGCGGACTCATTCTTGAACAATTTGGGAACATCCAGAACATGA</cdnaseq>

Protein Sequence

<aaseq>MDAMIGDPMSATSVEAVFEKQPSPEFRELVTPRAMAVAVVLSVVICFVGMRIQMTAGIVPALNMPASILSFFLLKWLIRLLQSCGFPMLPFTRQENMFLLTCIITCLNLALTSGFATNIIGMTSTVARSLADDPDPRDIMDHVPIGKWIVYLFLVGMTGVLINVPFNQVMIIDYKLLFPTGTVIAQLINSFHTPEGAYVAKFYFDFSATYIGLGMICPHIVNFGLFFGAIISWGFLYPFLETKRGQWYQTDSPTSLNGQNGYKVFISVTLIITDGMINFLTLITTASINFYQLRKEHDLGLANYFKKHPSLNYDDRKRIEVFLANRIPIPVPVAAYITCAAISTIAIPAMFNQIKFYHLAVLYMVIPVVTFCNTYATGLTDWSVAPTYAKFTTFVFAAWIAKPGAVVASLLASGVIVAALHISSQAMQDLKSGHMTLTSPRAMVTGQIFGVAVGSILCPCVFLAFQSTTKPNAPVGSKQSDYPCPFAGLYRAIGVIGTGGVKELPKHCMTFCVVAFCVTVIIDAVVLVSQKRGWSIHRYIPSMTVIALPFFAGSYFTIDMCVGSLLLLAWTRMNAKSAEMLSSAVAAGLICGEGLFTLPSALLNMFKVQPPMCMKFLSGGEEVEAADSFLNNLGTSRT</aaseq>

Gene Sequence

<dnaseqindica>1..337#2465..2631#2758..2855#3694..3880#4804..5931#ATGGATGCGATGATCGGCGATCCCATGTCAGCGACATCGGTGGAGGCGGTGTTCGAGAAGCAGCCATCGCCGGAATTCAGGGAGCTGGTGACGCCACGGGCCATGGCCGTGGCGGTGGTGCTCAGCGTCGTCATCTGCTTCGTCGGCATGAGGATCCAGATGACGGCCGGGATAGTGCCGGCACTCAACATGCCTGCCAGCATCCTCAGCTTCTTCCTCCTCAAGTGGCTCATCAGGCTGCTACAGAGTTGTGGCTTTCCCATGCTGCCATTCACACGCCAGGAAAATATGTTCCTCCTGACTTGCATCATCACCTGCCTCAACCTGGCCCTCACAAGTAAGCATCAGCATTATATGCCTGGGTAAATATTGCGAAAACATACTTCTCCCACAAGTATAGGAAATACTACATGTTATATATTTAGATGGAAAAGCCTACAACTGTGCTACTACTTGTGAAAGAAAAAGAAAAAAAAACTAGATAGACTGACTCAATCACCAGCCTCAGGTGGCTCTCTCCCTTACAGCGTACAGCTGAAAGGGCACATAAAACTAGCACCTGAGCATGCGACCTCATACAAATCACCTCATCTTACAAGTTATCAGTCAACTAAACTGGGGAGGTGACAAAACAGTAGGTTTCTTTACAGTTATCCTTCAACCAGTTGTGGCTTTGTGATATGTGAAACAAGAACAGAAACTATTTTATTTTCTGGCAGTTCAATCAGGACTATTAAGTATTAACTACTTTAAATTCTGCTAGTTGAGTTGCAGTTTTGAAAATCTAGCTTAAAAGTATTAGTGTTAGCCATAGTAGTTCTTCAGGGTGTCAAGAGTTACATGGTTCATCGAAATTATTTATCTTCTGCCAGGTTCTCAAGCAGCCATCCCAACATGAAAATCTTGTTGCAAAAGCCAGAAAGATTAAAAAAACAGAGTTCAAAATATCGGATAATCAAAACTTCTCTGGTCTAAGGACAACAAAACAAAATTTTGGTCCTAAAATATTCCATGAAACTGTTCTGAATGATGTTTGTCTAACAAAACTTGAATTTCCAAAAAATGTGCAAATTAAAATGCAACCAAGAAATTTTCTTTTTTCTCCTTTTAAATGTATTGGGACTTTGTTCTCATCAATAATACAATTATCTATGCATGAGTAATGACAAGATAAATTAATAAATTCCTCAGAAGTACGTGAAATATTCTTTTCTTAAGAAGTTATTTGAATAACCTGGAGGGGCAACATAAATCAAAACTTTGGAAATTACTAAAAAGCTTGATAAGAAGGCCAGAAGATAAGTGAATCTATAGGTAGTTAGATTTAACTTTCCGTAGGAAATAATGACATAAACAAAACGTAAACACTATTGCCAACAAAAATAATGAAGAACAGTAAATATGAAGTAGATATATAATATATTATGTTTTAAACAAAGGTTCCATACATAAATGAACCTTTTACCCAGTTAGTAGTTAGTACTAGTCTCACTCTAAACTCCACATAGGAGCCCAGTGGAAACAACTACTACCACTATCCCAAAATAATTGTAATTCTAGATTGTTTAGTATATATTAAGTTTTGAGAAAAAAGACTATGATACCCCTCATTAAATAGTATATAGATAAAACTAGAAGGATGGTTGAGGGTAGAATGAAAAGTGATTGGTAGGACAATTATTACTCTATTGTCACAACTATTTTGGGACAAATTTGAATCCTAGAAATACAATTATTATGGGACGGAGGTAGTATGAAATTTAATCTAGGCTTATTATATCAGCAAGTTCCAGTCATAATTAACCATCTATTTTGAATATCATGGGTGCTGCCAGAAAAGACGGAGAAAATTTAGAGGACTATTACCATACGATCACACTCACGTAGTTAAAATCTCCAGTAGTAACTGTATTTCCTCGATTACTGCCACAGGATAATTTCATGCCTCTAAAACCAAGAGAAATTTTATAATTAAGGTAGTAAAGAGACATAAAAGATGTGATTTGAACTTGGAGATTTGTCATATGAGATATGAAATTGATTATTGTGGTTATTGTAAATGCATATTCACCTGGGTCCATCCATTTATACAGACAATACCTTTTGAAATAAAAAATATTGATATATCAAAAAACAAAACATTCAGTAGAGAAAGTAGCATACCTATAAAACCAAACTTTTGGGGAAGTTGTGCGCCTAAAAAATAGGTTTTGGAAGGGGGAGGAGAGATTGAATTATCAAGAATTGTTTTTATCTTTTGAAACCATTTTTATTAACTTCGAATTAAATCCTTCCATAACTTATATTTAAAAGTAAACCTTTTGGACACAAGGTATTTAAGAGCCCAAAATTGGAATACTTTTTTCAAAACAAAATACTCAAATAATTTGTAGCCAGTTTTTTTTTTTTACATTTTGTATCTCTTTCTAGTTTAACTGGCCTATTTTCTTGTTACATTTTTTAGGTGGTTTTGCGACCAATATCATTGGAATGACTTCTACGGTGGCCAGATCACTTGCTGATGATCCAGATCCAAGAGATATTATGGACCATGTACCAATCGGAAAATGGATAGTATACCTATTCCTTGTTGGTATGACGGGAGTGTTAATAAATGTGCCATTTAACCAGGTTTCTTCTTTCACTGATTGATCATTTTTTTTTAATTTTAGAAGTTTCTACTTAACATTTCTAAGATTGTTTTGCATTATTCTCATCCTTAAACATAATTCATAAGTTGATTTCCTTATACTGCAGGTCATGATTATTGACTACAAATTACTATTTCCAACAGGAACAGTTATAGCTCAGCTTATTAATAGCTTTCATACCCCTGAAGGAGCTTACGTAGCAAAGTAATGAAGTCTTGTTTTCTTAGTAAAAAATTGACAGATTGAATTTCATTTAACTATATTCATGATTTTGTGCACTAATATTTGCATGTAATCCAGAATGCAGGTTGCGACCATTTTCAAAGTATTTTTTGGCAGTTTTTCTTGGTCTATGTTCCAGTGGTTCTATACTGCAGGCGATGATTGTGGATTTCAGCACTTTCCAACATTTGGACTAGGATTATACAAACACAGGTGATAAATATATTCAATTCTGCTAAAGAACGATGTTACATGCGTTACAGTTGTGTCCTCCTCACCTTCACAGAAAGATGACATTTTATAGACTATATATTAATCAATGTTTTTGAGTATCAACATATTATCAATTTATCATACACAAAAGATCTGAATGGTTATAGAGAAAACTGTGTAAATAGTTTATTACACAATTATCTCAATAGTGTGTATGCAAGTCATGTATTTCTATAAAAAAAGAATTATTTGACATATATAAGTCTAAGATCGTCATGTTCATAAAAGACATGACACTAAATATGAAAATGGCTAATGACAATTAGATCATACACGTCCTATGAAATGGCAACATTGAATTGATCAATGTGATTTATTTACTATAGGCTAGGGTAGGGAATAAATAACTCAGTCCAAATTTCATTGATGGTTCATAGGAATCTTATGCATTACGGAATCATTGAATTGATGCCATTTGTAGGAATTGAGTTTGACAATGATTAGTCAATCCATGTACAGGTTTGAATATATTTTACAGGATAAGCATATCAGTCGAAGTGAGGTACTAACACACACATATATATATATATATATGCTGTACCTACAGGTTCTACTTTGATTTCTCTGCGACATATATTGGTCTGGGAATGATTTGTCCACATATAGTAAATTTTGGATTATTTTTTGGGGCCATCATCTCTTGGGGATTTCTATATCCTTTCCTTGAAACTAAACGTGGGCAATGGTATCAAACTGACAGCCCTACAAGTTTGAATGGACAAAATGGATACAAGGTATGTACGAAAAAAATTAAAATGAAGCATACTACTGAAGGGTTGTCTAAAATTTATCAGTCCTTTTCTGCTACTAATCAATGCAAAGACATATTTTTCCCACCAATTATTTTAGCTACTCTACTAAAATGCATCTGAAGGTGTCCAAGCATGCCAACATCTCACACCCATAATAACCAATTAAGTTGAACAAACCGTACGATGATACGAACATATGTGTAATTGCTCTTTCTTTTAATATGCAACAACTTCCACTCTTCTATCTGTGAGTTGGTTGCAAACCTGCAAACAAGGGGAAAAAAGACATGCATGAAAACTAGGTAATTGCTATAAGTTGGACCAAGTATATGTATCTTACCACCTTACTGGGGTTAAAATTACACATTATCATTCTACCAATGCAAATTTCATGGTACTGTACATTCTTGTTGTTGTTGTTGATGGTATGTTATAGTAACTAGTGTCATTGCATCAAAAATCAAGAATACATAAATTCAAATGTTGTTGTTGATGGTATGTTATAGTAACTAGTGTTATTGCATCAAAAATCAAGAATACATAAATTCAAAAGTTGGCATCATTGCAGAAGAAAGGAGAAAATTCATACATACACTTTCATGTAATACAGATCAGGGAGGTATTGCATTCATTAACAATCTGAGCACATACTTCATATCATATATTTCGTTTAGTATATTACACTTGACTAAGAATTTTGAGATTCCAATCAAGCTTTTCACCTTTAAATTTAATTTCACCATGAGCTGTATCTGTTGCTACTACCAAACATGTGCATAGTCATTGCAGCACTTTTGATGATGTAGGCTATATTGCTGTCTTGATCAATTTGCTAGCTACTTTTTCACTAGTGAGACATACTCTTCTAAGCTTTTTTTTTTCTATGGATATAACTTATATAACAGGTGTTCATCAGTGTGACACTGATCATTACTGATGGGATGATAAACTTTCTAACACTCATCACTACAGCATCAATTAACTTCTATCAATTAAGGAAAGAGCATGATTTAGGGCTTGCCAACTATTTCAAGAAACACCCAAGCCTCAACTATGATGATCGCAAGAGGATTGAGGTGTTCTTGGCTAACCGGATCCCAATCCCTGTGCCAGTGGCAGCCTATATCACATGTGCAGCCATCAGCACGATTGCAATCCCAGCCATGTTCAACCAGATCAAATTCTACCATCTGGCCGTGCTTTACATGGTCATCCCAGTCGTGACCTTCTGCAACACCTATGCGACAGGGCTCACCGACTGGTCGGTGGCACCAACCTATGCTAAGTTTACCACCTTCGTCTTTGCAGCATGGATCGCCAAGCCTGGCGCTGTCGTGGCCAGCCTCCTTGCGAGCGGGGTGATCGTGGCGGCACTCCACATCTCGTCGCAAGCGATGCAGGACCTCAAGTCGGGCCACATGACGCTAACGTCGCCACGCGCCATGGTCACCGGACAGATCTTCGGCGTGGCCGTTGGCTCCATCCTCTGCCCATGCGTCTTCCTTGCCTTCCAGTCCACAACGAAGCCCAACGCACCGGTGGGTTCAAAGCAGTCCGATTACCCATGCCCTTTCGCGGGTCTATACCGCGCCATCGGGGTGATCGGCACTGGAGGGGTGAAAGAGCTGCCAAAGCACTGCATGACATTCTGTGTCGTTGCCTTCTGCGTGACGGTCATCATTGACGCTGTCGTGCTGGTCTCTCAGAAGAGGGGTTGGAGCATCCACAGGTACATCCCCAGCATGACGGTGATTGCGCTGCCGTTTTTCGCTGGCTCCTACTTCACCATCGATATGTGCGTGGGGAGCCTTTTGCTGCTTGCCTGGACAAGAATGAATGCAAAAAGTGCAGAGATGCTGTCATCGGCCGTTGCGGCAGGCTTGATATGTGGAGAAGGGCTGTTCACACTGCCATCAGCGTTGCTCAACATGTTCAAGGTGCAACCACCGATGTGCATGAAGTTCCTATCCGGTGGCGAAGAAGTTGAGGCAGCGGACTCATTCTTGAACAATTTGGGAACATCCAGAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018423