BGIOSGA018445

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Revision as of 02:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018445| Description = Japonica Group Os05g0245300 (Os05g0245300) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA018445, complete gene....")
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Gene Name

BGIOSGA018445

Description

Japonica Group Os05g0245300 (Os05g0245300) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA018445, complete gene.

LocusTag

NM_001061549.1

Ensembl Transcript ID

BGIOSGA018445-TA

Ensembl Protein ID

BGIOSGA018445-PA

Length

1693

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10634572..10636264

Sequence Coding Region

10636110..10636264,10635709..10635811,10634572..10634802

Genome Context

<gbrowseImage1> name=IndicaChromosome05:10634572..10636264 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:10634572..10636264 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGGTGCACCGGCTGATGAACGCCGTGCTCCGGCTCGCCGCTGCGGCGGCTGCTGCAACGGCGGCGGTCGTCATGGTGACGAGCCGTGAGACCACCAGCTTCTTCGGCATTCAGATGGAGGCCAAGTACTCCTACACCCCATCTTTTATCTTCTTCGTGGTGGCGTATGCCGTGGCGGCCGCGTATAGCCTGCTCGTACTGGCCGTGCCGGCAGGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATGTGGTGTTGGGGATGGTGCTCGCCGGTGCCGTGGCCTCCGCCGGCGCCATATCGGACATCGCGAAGAACGGCAACTCGCACGCCGGGTGGCTGCCGGTGTGCGGGCAGATACACGCCTACTGCAACCACGTCATGGCGGCGCTCATCGCCGGCTTCGTCGCGCTGGCCGTCCACTTCGTCGTCGTCATGTACTCCCTCCACATTGTCACCGATGTCATTTGCCCCTGCCATTAG</cdnaseq>

Protein Sequence

<aaseq>MAKVHRLMNAVLRLAAAAAAATAAVVMVTSRETTSFFGIQMEAKYSYTPSFIFFVVAYAVAAAYSLLVLAVPAGSALSRLALTTDVVLGMVLAGAVASAGAISDIAKNGNSHAGWLPVCGQIHAYCNHVMAALIAGFVALAVHFVVVMYSLHIVTDVICPCH</aaseq>

Gene Sequence

<dnaseqindica>1..155#454..556#1463..1693#ATGGCGAAGGTGCACCGGCTGATGAACGCCGTGCTCCGGCTCGCCGCTGCGGCGGCTGCTGCAACGGCGGCGGTCGTCATGGTGACGAGCCGTGAGACCACCAGCTTCTTCGGCATTCAGATGGAGGCCAAGTACTCCTACACCCCATCTTTTATGTAAGTAGAACATATTACATATATATACATGTTGTTGATTAACTTTGCCTCTGTACAAAGTTGTCAAAATCTCAATTCTGTCATATGATTTATGACTTTACGATTCTATTTAAGGTGCCTGATTCTCCTATCCTACATATAGAATCTACGATTTTGTGATTTTTACGTATATGATTCTATGATTATATATGGTCCTACTTAGAACATCCGATTTCGATTTGAGATCACGATTTAGCAACATTGCTCCAATGCCATCGTCGGTTGAGTTCTCTGCACGTACTGTTGTGTTCTGTGGCAGCTTCTTCGTGGTGGCGTATGCCGTGGCGGCCGCGTATAGCCTGCTCGTACTGGCCGTGCCGGCAGGGAGTGCCCTCTCCAGATTGGCGCTAACAACAGATGTGGTACTGTCTCCTCTCTGTTTTGTAAATTTACTTACAATATTGTTTGATTCCCTCGTTTCATCGATTCATTCTAAACAGCAAGATAATGAATGTCCTTCTTTTCGGCATTGGACTTTCCAATCAATTAATTGATGGTAAAACTCGTAAAGATCAACTTTGCGAAAATTCCATTGTATCCTAGGAGCTTGTAACTCATAACTCATTAGAAAAACAAAAATGAGATTCTATATAATAAGTTGTTGATATTCAATAACTCGTAGAAAACAATCACAAAATCTAAACATTTATTAGTTTATCCATAAGGCGATCCCGCAATACATTATAGCCATTTTCTAATCGAAATGATCAAGAAAGATGATTCAGTGTTCTCTACTAGTAGTATTATACTACTAGTAAAAATGATCTGAACCGTTCGTTACCAAGAGTAAATCGGTAATTTACTAATACAGTTATTACGGGTAACTTTGTTATTTATGGTTTTCCCCGGCTAAATCGATATGTGGTCATTCATTGTGTTGGTATTGCTCATATTCTATCTAAAAAGCTAAAAAAAGAAGAAAAAAAAAGGTTTACCCACTACTAAATGACGATTATGTCCCTTCACACTTTTTTTTTTTTGACAATAATGATCCTCGACATTTCTACTGCCACTATCTAAGGTGATAATATAAATAGATACAAACCCTTCGATCAAATGAGATCAACAGTTTATAAATTGTTTTCTACTACAAGTAGAAAGCACCATACTAGGCTCACATTATTCCGTCTTTTAAAATGACCAGATTTATTTATACTAAATTGCACGGATGATCCTAAAGCTTGTCGCATGCATGGTATCATCTGGTAAAAAAAAAGATTGTAGAACCAGTTTTCGATCAATATTTCTCCGTCCGTCCATGTACGCAGGTGTTGGGGATGGTGCTCGCCGGTGCCGTGGCCTCCGCCGGCGCCATATCGGACATCGCGAAGAACGGCAACTCGCACGCCGGGTGGCTGCCGGTGTGCGGGCAGATACACGCCTACTGCAACCACGTCATGGCGGCGCTCATCGCCGGCTTCGTCGCGCTGGCCGTCCACTTCGTCGTCGTCATGTACTCCCTCCACATTGTCACCGATGTCATTTGCCCCTGCCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018445