BGIOSGA018468

From RiceWiki
Revision as of 02:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018468| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018468, complete gene.| tag = OsI_191...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018468

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018468, complete gene.

LocusTag

OsI_19106

Ensembl Transcript ID

BGIOSGA018468-TA

Ensembl Protein ID

BGIOSGA018468-PA

Length

2169

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10186855..10189023

Sequence Coding Region

10188385..10189023,10186855..10187445

Genome Context

<gbrowseImage1> name=IndicaChromosome05:10186855..10189023 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:10186855..10189023 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGAGGAAACCAGCAACGACAACCTGGTGGTTCAAGGCAACGAGATTGTTCCAAGCAATGGGGAAGCTCTAGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTGCGGAGGACTTAATTCAAGGTGACGAGGTCCAAGGAAATGAATTGGTCAGTGCTGAGATGAGTATCCCTCCAACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTATTGAAGCTGTCTCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGCAAGCAAACTTTTGCTTACAGCTCTGGTTCAAAAATTGCGGGCACTAGCCATCTCAAGAGGCACATTACCTTGGGTTCATGTCCTAAAATTAAGAACCAAGAGCACAAGCTATTACTGACTCCAGCTGGAGGGACTGACAATGATGGTGAGGGTACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTGGTTATGCAAATGCTGCTTTTGATCAAGAACGCAGTTGCTCATATCTGGCGAAGATGATCATTTTGCATGACTATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACAGTCTGCAGCCACGTTTCAGGGTTGTAGATGTTGAGACAATGGAGTGGGAGATGAAGCTCGTTGAGTTCAGCTACTCGAAAATTTATGGTGTTGAAGCTGCGAAATATGTTAAGGTGGTGGATGATGCTGTTCATGAGCTCTACAACGAGTATGTTGCACAGCCCCTCCCCTTAACGCCGGCTTACGTTGAGCAAGGGGGAGGTAATAATGCACCTGCTAGCGAGAATAGTACTCAAGCAACTGCTCCTTCAACCGGCGATGGACTTGTGGACTTCGATATGTACCTTTCTGAGATAGCTACAAGCCAGCCAACAAAATCTGAACTGGAACAGTACCTGGATGAGTCCCTCACTCCGCGCATCCAGGAATTTGACATTCTGAACTGGTGGAAGCTCAACACTCTCAAGTACCCTACTCTCTCAAAGATGGCCCGGGATATCTTGGCCATTCCGATGTCGATGGTGAGCAGCGGCAACTCTATTTTCTCTGCTGGAACTGGAACTCGCATGCTTGATGACTACAGAAGCTCATCGCGTCCAGAAATTGTGGAGGCGCTCGTTTGTGCCAAAGACTGGCTTCAGTATTTACCAGCTACCCCGGAGGCACCGAGTACAGCGCTGGTCAAGGTGGATGCAGCATAG</cdnaseq>

Protein Sequence

<aaseq>MAEETSNDNLVVQGNEIVPSNGEALAEEVQGDELVLAEDLIQGDEVQGNELVSAEMSIPPTSRRRRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPKIKNQEHKLLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSCSYLAKMIILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEWEMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAPSTGDGLVDFDMYLSEIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKYPTLSKMARDILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSSRPEIVEALVCAKDWLQYLPATPEAPSTALVKVDAA</aaseq>

Gene Sequence

<dnaseqindica>1..639#1579..2169#ATGGCTGAGGAAACCAGCAACGACAACCTGGTGGTTCAAGGCAACGAGATTGTTCCAAGCAATGGGGAAGCTCTAGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTGCGGAGGACTTAATTCAAGGTGACGAGGTCCAAGGAAATGAATTGGTCAGTGCTGAGATGAGTATCCCTCCAACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTATTGAAGCTGTCTCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGCAAGCAAACTTTTGCTTACAGCTCTGGTTCAAAAATTGCGGGCACTAGCCATCTCAAGAGGCACATTACCTTGGGTTCATGTCCTAAAATTAAGAACCAAGAGCACAAGCTATTACTGACTCCAGCTGGAGGGACTGACAATGATGGTGAGGGTACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTGGTTATGCAAATGCTGCTTTTGATCAAGAACGCAGTTGCTCATATCTGGCGAAGATGATCATTTTGCATGACTATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACAGTCTGCAGCCACGTTTCAGGGTTGTAGATGTTGAGACAATGGAGTGGGAGGTGTATGCTGTTTACCAGAAAGAAAAGGAAAACCTCATGCAAGCATTCAACACTATGCCTGGAAGGATCAGCCTCGCTATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGCAGTTTATTGACTCTGAGTGGAAGATGCATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTACAAGCCTTTCAGACTGGAATATGAAGGACAAACTATTCACCATCACATTGGACAATGATTGCTCATCACATGATATATACAGTGCGAATCTGAGGGATTATCTCTCCAACAAGAACAACCTCATGCTCAAGGGCCAACTATTTGTTGTAAGGTGTTATGCCCATATCCTGAATGCAGTTGCTCAGGATGTCATTGCTTCAATTCATGGTGTCATCTATAATATCCGCGAAAGCATTAAGTTCATAAAAGCTTCTCCTAGCTGTGAGGAGAAGTTTGCAGAGATTGCTCTGCAACTAGAGATCCCAAGTACCAAGACCCTTTGTCTGGATGTTACGACACAGTGGAACACTACCTATCTCATGCTGCTGGCTGCCTTGGATTATAAGCAGGCCTTTTCTACTCTAGAGACAAGTGATGATAACTACAACGAGGCACCGTCCGCTGAGGACTGGAAAAAAGTTGAGGCTGCCTGCAATTACTTGAAGCTATTGTATGACTCAGCACATAGCATCATGGCTGCAGCAAATCCAACTTCAAATCTCTTTTTCCATGAGGCATGGAAACTTCAGCTCGAGCTGTCAAATGCCACAGGGCGTGAAGACCCTGTTTTCAGCAGCATTGCCAAGGATATGCACGAGAGATTTGACAAGTACTGGAAAGATTGCAACCTTGTGTTAGCTATTGCTGTTGTGATGGATCCGCGCTTCAAGATGAAGCTCGTTGAGTTCAGCTACTCGAAAATTTATGGTGTTGAAGCTGCGAAATATGTTAAGGTGGTGGATGATGCTGTTCATGAGCTCTACAACGAGTATGTTGCACAGCCCCTCCCCTTAACGCCGGCTTACGTTGAGCAAGGGGGAGGTAATAATGCACCTGCTAGCGAGAATAGTACTCAAGCAACTGCTCCTTCAACCGGCGATGGACTTGTGGACTTCGATATGTACCTTTCTGAGATAGCTACAAGCCAGCCAACAAAATCTGAACTGGAACAGTACCTGGATGAGTCCCTCACTCCGCGCATCCAGGAATTTGACATTCTGAACTGGTGGAAGCTCAACACTCTCAAGTACCCTACTCTCTCAAAGATGGCCCGGGATATCTTGGCCATTCCGATGTCGATGGTGAGCAGCGGCAACTCTATTTTCTCTGCTGGAACTGGAACTCGCATGCTTGATGACTACAGAAGCTCATCGCGTCCAGAAATTGTGGAGGCGCTCGTTTGTGCCAAAGACTGGCTTCAGTATTTACCAGCTACCCCGGAGGCACCGAGTACAGCGCTGGTCAAGGTGGATGCAGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018468