Os11g0669100

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Revision as of 09:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0669100| Description = Calmodulin binding protein-like family protein| Version = NM_001074959.1 GI:115486566 GeneID:4351085| Length = 5983 ...")
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Gene Name

Os11g0669100

Description

Calmodulin binding protein-like family protein

Version

NM_001074959.1 GI:115486566 GeneID:4351085

Length

5983 bp

Definition

Oryza sativa Japonica Group Os11g0669100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28858066..28864048

Sequence Coding Region

28858269..28858444,28858746..28858785,28858934..28859043,28859963..28860011,28860234..28860283
,28860683..28861227,28861660..28861820,28862308..28862517,28862602..28862767
,28862842..28862946,28863029..28863108,28863673..28863837

Expression

GEO Profiles:Os11g0669100

Genome Context

<gbrowseImage1> name=NC_008404:28858066..28864048 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28858066..28864048 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacacgaagcgtccgctgccggcacaggcgccaccagctgggcttgtcctggtgcccgcgcccaagcgcccgcatgtggatgctgctgccggcggcggcggcggcgtggcgtcgccgcgggggaagcggcagcttcgctccggcatgctcgtcctcttcttcgtcgcgcaagtcaaggaggagatgagatacaaccagcgacttcgtcgagtgatacgtggagagaatgctatttcccagcaaagggcaatcgaaacatttgattgtgtctttcagaaagcatttgacaatgccttccagaagcatcttgatccaatttaccgctcccttcaatcccttaacaagcgcactgatattctcagccatgaagtggaacaaatcaaacattcaaattctaaccatcatgctaatcagcaatacagatcaaaggcaaatcaagagtctgctgccatcactgaggaagtgaatcaagaacaaacagctgctagatttgtcgcgagtgaagctcaggaggggcaaagagttgagttgaggttcctcaataagttgaaccctcttgtttttacaaaggaaaaaattacagcggaggatggtacagctatcaaaattgccatagttagggataatcagataattacatctggtccactttcttctgcaagaattgaaattttggctctccatggtaacttttatgatgttgtccctgataattggaccgaatctgagtttgatcaccgcatagtaagtagttcacaaggtcccgcgttaggaggggtttgtcaagtcaagctgaagaatggggaggcctctccttctgatgtatttttcaatataccatcttcgaagactgaaagtggaaggctcattctagcagcaaaagttcatacaagtgacattggtgggcttcgaattaaggaagctgtgatgatgaatcctgttgtggtgcaggtttaccgaaacaaactaaatagaagtagtgaccgtccgaagctaaaagatgaagtacatcgtttaaagggaatttcaggaaagggatgccgcaccaaatggcttaaagataatcaaatcaacactgtggaagagttcgtaaaggctttaaataaggatgaagaaaagatccgcaatgagtgtttcaagctaaagaaggataataagctttggaaagatacaattaaacatgctaaagagtgtgatcttgaagggaattgcaagctgaaattatatagagctgaagagcagcatgttgtactcttctttaactgcgtgcatgacctcgttggtgcgaaatttcgtgatcactatgttgcaaaggacaatttcagttcagatcaacaggatgcagtgaatcgtttgaagaaacaagcatatgatgagctggatagcattggctttgatcacgaaatgaaaaataactatccggtgatgacgctcagtgatgatgcttacattcccttcattgacacagcacaaaatcctccagatttgcatgttacatttcaagttcagggtattgcaggagctgagatttatcatgcacatgaactgcctcaagcatttcctaacaacaataatgattttggacaacactttttacatggctttcaaggtgctctgactcagatggaccatgactatgcgcaatttggcattgctgatatgcagtgttatactacacaggcacctgaaggtacctcttatggaggcaacaacatgatcggaccagcaaatgtaccgcagaatgttattggtgacggctctatggacatgtttgactgttatgcatacatctttccggacaatgagaaccagaatgagaggcctcatagctctgcatatccaggaccagtttaa</cdnaseq>

Protein Sequence

<aaseq>MHTKRPLPAQAPPAGLVLVPAPKRPHVDAAAGGGGGVASPRGKR QLRSGMLVLFFVAQVKEEMRYNQRLRRVIRGENAISQQRAIETFDCVFQKAFDNAFQK HLDPIYRSLQSLNKRTDILSHEVEQIKHSNSNHHANQQYRSKANQESAAITEEVNQEQ TAARFVASEAQEGQRVELRFLNKLNPLVFTKEKITAEDGTAIKIAIVRDNQIITSGPL SSARIEILALHGNFYDVVPDNWTESEFDHRIVSSSQGPALGGVCQVKLKNGEASPSDV FFNIPSSKTESGRLILAAKVHTSDIGGLRIKEAVMMNPVVVQVYRNKLNRSSDRPKLK DEVHRLKGISGKGCRTKWLKDNQINTVEEFVKALNKDEEKIRNECFKLKKDNKLWKDT IKHAKECDLEGNCKLKLYRAEEQHVVLFFNCVHDLVGAKFRDHYVAKDNFSSDQQDAV NRLKKQAYDELDSIGFDHEMKNNYPVMTLSDDAYIPFIDTAQNPPDLHVTFQVQGIAG AEIYHAHELPQAFPNNNNDFGQHFLHGFQGALTQMDHDYAQFGIADMQCYTTQAPEGT SYGGNNMIGPANVPQNVIGDGSMDMFDCYAYIFPDNENQNERPHSSAYPGPV</aaseq>

Gene Sequence

<dnaseqindica>204..379#681..720#869..978#1898..1946#2169..2218#2618..3162#3595..3755#4243..4452#4537..4702#4777..4881#4964..5043#5608..5772#gcggggtggagtgtggagtcgacttgactcccaagtccacttccctccataaagcgagctcggagcgcagccacagcagtgtagagcgcaagcacagcgacggcgagcaaccgcggtgaccggagaagcgtactacgtgtataccggcgtcggtcgatcgacggcaatcggccggattccggtgtgattggctcaccggcgatatgcacacgaagcgtccgctgccggcacaggcgccaccagctgggcttgtcctggtgcccgcgcccaagcgcccgcatgtggatgctgctgccggcggcggcggcggcgtggcgtcgccgcgggggaagcggcagcttcgctccggcatgctcgtcctcttcttcgtcgcgcaagtgtatggcctcgatccattcgcctttggcttgatttctttatgggcgccaatatggactccggtccaatgaaaagtatttcgaggtatcggttcctgacaataccaaatcgtttttgatcattggatttaataatgttcatcatgtccagttatatccaactatcagaaacgatttggtatcgataccttaaggtattttttactggaccggagtctggagcaactctcttgtctgatctgtattcgttgatgggtctaatttctgaataatctgttgcgtgttcttccattcctgatgcagcaaggaggagatgagatacaaccagcgacttcgtcgagtggtgagcagagcagctctgcatctctccatccgtgatctgtctcaccaccacagcgtcgtcttgaatcgatctaaatcattttccccatcattttatactacgatctttttggtagctcattgcatagttatgtgtttgtctactgtagatacgtggagagaatgctatttcccagcaaagggcaatcgaaacatttgattgtgtctttcagaaagcatttgacaatgccttccagaagcatcttgatccaatttaccggtaagcaagattgatctctcactccctgcaacttggactgaagaattacatacttccattcatggactagtagagtggttaaatatgataacagattaacagttcacctgtcttcttgctcagataatatatctttccactcctttctaactttgttaaatccagaaaaccaaaaccaagagcacgcgcttgaaatttgatttaggatcctaatatagttatttttttatgatactccgttgtcttgtaactttttttttctagtaggtatgcaaatttcctgtttaattacactccttaaaaatttcatgcttaatactccttccggtaaaaaaaagcgtttaagacaagattaattcggtcaaacttttggagctttaaccatcatatttatattagaatatgtttaaaaaattcaataaattttatgatattacgatggtacttttcaagacgaatctatgcatactcttgaccatcattctcttgtttttaaaatgaacacttgagaagtagttaatggttacatttagaaatttgatcaaatcatgtcttaaatattaaatatttatgactagagggatacctctaaatcagacaaattgctccaaacatgggcaactactaatttgatcatttatagctcttctatgttgttatgttaacgttgagaagatgaaatattcatgttgttagaccatacatgagagaaatatgaactacgaaggtgctatgaaatatagtaaattgaatcaaacttattccattaatcttgaagtctccaattttgcgtgttcaccggtatcttatctttctatttgtaagagaatgatgaagttcgttatctatttaaactaacctttttttccacttctttggatttaaactaacccttttccttccacttctttggctgcagctcccttcaatcccttaacaagcgcactgatattctcagccatgaagtggttagatttcaaatgttccactgcttctttacagttcaacacttcaaacccttttctgataagggagtcccttttatcgagtttcattgcaagaagctacttggttgaatgcaactcaaactaaaaagttttatcctatttattttttctaaaaaaaacaaaaggtgtttgcctgacaaacttcaattcttagctcataatgattcttcacccaacgtgcaggaacaaatcaaacattcaaattctaaccatcatgctaatcagcaatacaggtatgatatttgaaattatcaaaaatatgcatagatgacttctattatttctagtaccaatgtttcactggttcttcatattgtttttcttttttcggcaaccagttcttatcaatcacttcaaatgacttgtgaactaccatgtatccatggtacactatctatttatggggcttgcctaaacaactttatgatgttcttttcatgctgttgtgagtctgtgacttgtgatgtactaaagttgtgatttttggaaaatcggaagtactgtcagatgttcaaatgacactagaattaatacacaggggtgtttcatactttttttaaaagagagaaaaagcttttcctcctatatgttgatagagaaggggtttcatactatttgtgtatgcattgtagatcaaaggcaaatcaagagtctgctgccatcactgaggaagtgaatcaagaacaaacagctgctagatttgtcgcgagtgaagctcaggaggggcaaagagttgagttgaggttcctcaataagttgaaccctcttgtttttacaaaggaaaaaattacagcggaggatggtacagctatcaaaattgccatagttagggataatcagataattacatctggtccactttcttctgcaagaattgaaattttggctctccatggtaacttttatgatgttgtccctgataattggaccgaatctgagtttgatcaccgcatagtaagtagttcacaaggtcccgcgttaggaggggtttgtcaagtcaagctgaagaatggggaggcctctccttctgatgtatttttcaatataccatcttcgaagactgaaagtggaaggctcattctagcagcaaaagttcatacaagtgacattggtgggcttcgaattaaggaagctgtgatgatgaatcctgttgtggtgcaggtttaccgaaacaaacgtaagttttccttcagaattgcaagctggttattctgtagtttgcatcattttttttggtcgggttagctgaaaaatcgaccaaccaaattgtattaagaagagagaaatgtgccagctacaaaacaacattatactgtcacagggcataagcccccctcccccctcccccccaaaaaaaaataaaaagagggaaaaaatacatatagtttgcatcatgtatttattatgtaagttttgtagtgtacattcatttttgatgtagaggccggtttaatctattattattatgtaagtattctccacatggcctgttaatacctcctagtgaccgtacaaaatctattctttcattggatttactttgaaattacatattgcataatcttcacgatatgatctattgtcatttactttgtttgcttttccccagtaaatagaagtagtgaccgtccgaagctaaaagatgaagtacatcgtttaaagggaatttcaggaaagggatgccgcaccaaatggcttaaagataatcaaatcaacactgtggaagagttcgtaaaggctttaaataaggatgaagaaaagatccgcaatgtaaggcctctgggattccaattctctctcatatgtgcacgaattaaatccatacagaaattctgtgtttatgttaattagagcctattattcatttcttcgtatatcagagcaaatttacctttcaatgccatgaaacagtacaagcataagtaaaagggtgtagctatatttatggcgccatatttttcatcaaaaaatagtcggcatgtatttacattgtaagtctctaaattacatatgtaattttagtgtatttacaatgtaagtctcaaaattacatatgtaagtactaaaattacatatgtaaattcgaaaattacatactaattacatatgtaagtggggtgtaaatgaggtgtaactactgtgtaagtggctgaaaaaaaatcgactgtagcatatggcgccatatttctagcaactccgtaagtaaaatattatttttgacaaacgaactataacatacgcattccttggagttcaggagtgtttcaagctaaagaaggataataagctttggaaagatacaattaaacatgctaaagagtgtgatcttgaagggaattgcaagctgaaattatatagagctgaagagcagcatgttgtactcttctttaactgcgtgcatgacctcgttggtgcgaaatttcgtgatcactatgttgcaaaggacaatttcagttcagatcaacaggtatgcgttgatattggcattcttctacagatgcaaacctttgatgagaacttagaagattacacttcttttttgttttctcaggatgcagtgaatcgtttgaagaaacaagcatatgatgagctggatagcattggctttgatcacgaaatgaaaaataactatccggtgatgacgctcagtgatgatgcttacattcccttcattgacacagcacaaaatcctccagatttgcatgttacatttcaaggtaagacattggttttgttctcttgtctttcatcagactcaactactgacgatttgtttatttggatttgacagttcagggtattgcaggagctgagatttatcatgcacatgaactgcctcaagcatttcctaacaacaataatgattttggacaacactttttacatggctttcaaggttggttctgcttttttttttctgcttctgctggttttgttttgaggaatacttttgtgttggaactaaagtaatcaagcaggtgctctgactcagatggaccatgactatgcgcaatttggcattgctgatatgcagtgttatactacacaggcacctgaagtaagtggagtttcttttccgttggctcagtttgtaagaacacggatgaacttataagcccctgttaaaatttgaattttaaaacctatttttttacctctttcatcatagtttttctaccattagcttttaaatcggtaagaatacatatgtaaaagttttacccacaattttttttgttattattttttagataatggaataaaatctaggtctttgctcaaagagctacagccaattattactccaattcaagcaaacacaaacgcacctcaacaattcataaaaacactggtctaataaaacaagagcacacacaaactactaaatgcaacacaagaaagaatcacaagactatgaattctatttgtgaatctctatccgaagttagtgaaaaactgcataaccgttgactcaagattgtgacatgcagctttaacaacagttaacaaattgtatgtacgccatgaaaacaagactgcctctgattgttcagatcatagtatcgagtatctttgtgttgttccacactccttgaatgctaacgggtcattctttcttcagggtacctcttatggaggcaacaacatgatcggaccagcaaatgtaccgcagaatgttattggtgacggctctatggacatgtttgactgttatgcatacatctttccggacaatgagaaccagaatgagaggcctcatagctctgcatatccaggaccagtttaactgaaggctttgttgccagctagtaatctatcatgatttctgattaatttcattctttatttagataatggatattttattgttttattcttgatggatgtattactttcaagaaatattcttgctgtatgtattagcatttgttgatgcagaaaattgaactgtactagtacttatgtttcagaaaaaaaaacatcgactgttatgttac</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0669100, RefSeq:Os11g0669100