BGIOSGA018513

From RiceWiki
Revision as of 02:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018513| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018513, complete gene.| tag = OS12G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018513

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018513, complete gene.

LocusTag

OS12G0271700

Ensembl Transcript ID

BGIOSGA018513-TA

Ensembl Protein ID

BGIOSGA018513-PA

Length

3492

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8973520..8977011

Sequence Coding Region

8976817..8977011,8976580..8976720),complement(8975304..8975431,8974688..8974791),complement(8974150..8974277
,8973520..8974068

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8973520..8977011 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8973520..8977011 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCCGTCCTCCCTCGCGTCGTCCTCGCACCTGTCCCGCCGCGCCACCGCCGCGGCGTCGCCGTCGATCCCTCCTCCTTCTCCCCCTCATCCTCCGCAGCGGCTCCGGTGCGGCTGGGTCGGACGGGCGGCGCCGCCGACGCGGCGCGCGCCAGGTGTTTGCTCCGTGGTCTCGCCCAGCAAGCCAGGTGTTGCTGCTGTTGACGTGCCGGCCGCGACGATTCCTGACGCGGCGGCGACCGGCGTCGGCGTCGCCGAGCGCACTTCGGTGTCGTCGCTGCTGGAGGTTGTGGCGGACGACTTGCTCAAGCTTAACAACAACCTCAAATCGCTTGTTGGTGCAGAAAATCCAGTTTTAGTTTCTGCGGCTGAACAAATATTTGGTGCCGGTGGAAAAAGATTAAGACCGGCACTAGTTTTTCTGGTATCCAGAGCAACTGCTGAATTGGCTGGTTTATTGGAACTAACTACAGAACACCAACGTTTGGCAGAGATCATAGAGATGATCCACACTGCAAGTTTAATACATGACGACGTCATAGATGATAGTGGGATGCGAAGAGGGAAGGAAACTATTCATCAGCTATATGGAACACGGGTGGCTGTACTTGCTGGTGATTTTATGTTTGCACAATCTTCTTGGTTTCTTGCAAACCTTGAAAATATTGAAGTTATAAAGCTCATCAGTCAGGTAATCAAGGATTTTGCCAGTGGTGAAATAAAACAAGCATCAACACTTTTTGACTGTGACATCACCCTTGATGATTACCTGCTCAAGAGCTACTACAAGACCGCTTCTCTGATTGCAGCAAGCACAAGGTCAGCTGCCATATTTAGTGGTGTCAGCACTGCTATATGTGAACAAATGTATGAATACGGAAGGAATCTCGGTCTCTCCTTCCAGGTAGTCGATGACATTCTTGACTTCACCCAATCAGCTGAACAACTTGGGAAACCTGCAGGAAGTGACCTGGCAAAGGGTAATCTAACAGCCCCGGTCATTTTCGCTTTGCAAGATGAACCACAGCTCAGGGAGATCATTGATTCCGAGTTCAGTGAAACAAATTCCTTGGCTACTGCAATAGAGCTAGTTCATAGAAGTGGTGGAATAAAGAGGGCTCATGAGCTTGCAAGAGAGAAGGGTGAAATAGCTATCCAAAGTCTGCAGTGTCTTCCAAGGAGTGAGTTCAGAAGCACTCTTGAGAACATGGTGAAATATAATCTAGAAAGGATTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MAAPSSLASSSHLSRRATAAASPSIPPPSPPHPPQRLRCGWVGRAAPPTRRAPGVCSVVSPSKPGVAAVDVPAATIPDAAATGVGVAERTSVSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQDEPQLREIIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIAIQSLQCLPRSEFRSTLENMVKYNLERID</aaseq>

Gene Sequence

<dnaseqindica>1..195#292..432#1581..1708#2221..2324#2735..2862#2944..3492#ATGGCGGCGCCGTCCTCCCTCGCGTCGTCCTCGCACCTGTCCCGCCGCGCCACCGCCGCGGCGTCGCCGTCGATCCCTCCTCCTTCTCCCCCTCATCCTCCGCAGCGGCTCCGGTGCGGCTGGGTCGGACGGGCGGCGCCGCCGACGCGGCGCGCGCCAGGTGTTTGCTCCGTGGTCTCGCCCAGCAAGCCAGGTTCTCTCTCTGCCGCTCCTCTGCTAGTTTACCTTGCTCTCAGTGGCAGCGGTGTTGGGCGGGTGAGGCTGAGCGGTTGGGTATGATCTGGTGTAGGGGTTGCTGCTGTTGACGTGCCGGCCGCGACGATTCCTGACGCGGCGGCGACCGGCGTCGGCGTCGCCGAGCGCACTTCGGTGTCGTCGCTGCTGGAGGTTGTGGCGGACGACTTGCTCAAGCTTAACAACAACCTCAAATCGGTGAGCTTCACCTTTTCCTCCCAAAGTTTGCATCATTCTGTTCAGCTTGTTCATGATGCAAGTAGCATTGAATAGCTTCTCTTTCTCCTAGCACATTTGGTACAAGGCTCACGGTTGCTACGACATAGTCCAATACAAAAAAAAAAAGTTTCACTGATTTTGCTTGGAAATGTATCGAACTGTGACAGTTTTAGTCCATAAATTTTAGAATAAAAATAATTTGCACTTAGTGATAAAGTTGTTCACAATTTAAGTAGTTGGTTGGTTGGTTGGTTGAACAAAATGTTAATGGTTGTAACTTCTGGAAAAATAAAATGTATTCTTAGTTCCTTGCGTTCGTCGAGGGAAATTAATGTGCAACGAAGGTTGAAAGGGAAAGAAATATGCCCATCATTTGCAGTGTCACTGGAATATACTACAGGAGCGAGTAAACAGTGCAGAGTCGCATAATGGTCCATTCCTTTTGAACTAACTAATGACCCCAGTTATCGAGGAATGGAGGCCTGGGAAGTTTTTTTAGATAATGGATAGAAATCTGGCCTCTATATCTCTAAATGGATATACCAGTGTTTACAATTTGGTTCGAAATTTCGGACCCCACCGGCAAATCAATATACTGACCGAAATTTTTGGGTTTTCTCAATTTTTTGTGGAATTTGGTCAAAGTTTATTCAAATCCAGTCAAAATCTTTCAAAATTTCAAAAATTATGGTCCGAAAAGTGCCGAAAATCACGAAATTAAATTTCGGTCCTACCGAAATCACAGAAATTGAAATTGTAAACCCTGGGATATACACAGCCAAAGAGGCTTGGGAAGTTGGGAGTGAGAAGTAGAGTGAATGAGCAAATGCCTTATAGTAGCTCTTATGTAGTGCTTTTGCACACTCAATAACTTCTTCCATGTCTGCTATTTTATGCAACTTCTCTATAATTGCTGAGCTTTGACATGTTTTCTGCTCTTGAGTAGTGACATTGCACAATACTATCATTTTTCCAATCCTTCCTCTATAGATCATCAATGTCTGCTTAAGCAAGACATCAAACATCACAGAATGACATATCAAATACTAGTACCTAAACTTTTTGCAAGAGGAAATTGTACTTATGTATGTTCTTGTTACAATAACTAGCTGACATAATTTTAATAGCTTGTTGGTGCAGAAAATCCAGTTTTAGTTTCTGCGGCTGAACAAATATTTGGTGCCGGTGGAAAAAGATTAAGACCGGCACTAGTTTTTCTGGTATCCAGAGCAACTGCTGAATTGGCTGGTTTATTGTAAGTTCCTTTTGGCTGCATTATCATTGATGTGAGTAGGTTTGGAATAGAGTGCACTATCTCATAGGTCCCTAAACCATAACATGTGTGTTATTTAAGTCACCGAATTACAGAAGTGCAAATTGGCTTCTATCCAACCCAAACTTAATAAGTTACCAATGTTCAGGCAGCACTTTAACCCTGCTAAATCAAGTTTGACTAAAGAATTTCTACCAAAGTAAATAAAAATCTTAGTGACGTGTGAAATTTTCCTTCGAATTGCAAAATATTAATATCTATTGATTTCAATTGGAAAACAAAACTATGATTTGGACTAAGGGTGTCACATGTCATTTCTAATTACCATAAAATGGCATATGGAACTTTGTTAACCCATTTATACAAATCCCAGGACATGAATGTGCAGTTCTCAAGTTCAAGCACCTAGGTGACACCACACAAGTTTAGACACCTATCATATACTTTAATCTTTTAAAATTATTCCCTCAAGATCTTTGATTTTTGGATTACAGGGAACTAACTACAGAACACCAACGTTTGGCAGAGATCATAGAGATGATCCACACTGCAAGTTTAATACATGACGACGTCATAGATGATAGTGGGATGCGAAGAGGTACGTATTATGTTGTTTTTATGGAAGGCCAGCAGTACTGGCAGTAATAACCATTCTCTCTTAGCCAACAGAACTGTCAACAAAAACCGATCTTTGTTATTTCATTTTTGTGACACATGTGCCTACCGTTTATTCTTCTTAGAATACTCTCCTGCATATTCTTAGAAATACATTGTCTGAATTTTGCCTCCATGCATTCATCTAGTTTGAAAACAAAAAATGCTGTCGTTGCATTACAGAAACTGTTCTGTTTCGCTCTAAAAGAAAAAAACAAAACTGTTTTGTTATTTGTTTTCGTTATTTATATGGCAATCCTGTTTGATTTTACTTAACTCCTTTCTATTGTCATTGTGAAATAGGGGACTCAAGAAATTTACCTGTTTAATCTGAGGTACATTTATTATTTTTAGGGAAGGAAACTATTCATCAGCTATATGGAACACGGGTGGCTGTACTTGCTGGTGATTTTATGTTTGCACAATCTTCTTGGTTTCTTGCAAACCTTGAAAATATTGAAGTTATAAAGCTCATCAGTCAGGTAATGAAGAGTTTGAGCAAGTTTTTGTGCCTTATTTAAAACTATGCATGATTTGCATCCAGAAAGGTGCTTCTTTAACAGGTAATCAAGGATTTTGCCAGTGGTGAAATAAAACAAGCATCAACACTTTTTGACTGTGACATCACCCTTGATGATTACCTGCTCAAGAGCTACTACAAGACCGCTTCTCTGATTGCAGCAAGCACAAGGTCAGCTGCCATATTTAGTGGTGTCAGCACTGCTATATGTGAACAAATGTATGAATACGGAAGGAATCTCGGTCTCTCCTTCCAGGTAGTCGATGACATTCTTGACTTCACCCAATCAGCTGAACAACTTGGGAAACCTGCAGGAAGTGACCTGGCAAAGGGTAATCTAACAGCCCCGGTCATTTTCGCTTTGCAAGATGAACCACAGCTCAGGGAGATCATTGATTCCGAGTTCAGTGAAACAAATTCCTTGGCTACTGCAATAGAGCTAGTTCATAGAAGTGGTGGAATAAAGAGGGCTCATGAGCTTGCAAGAGAGAAGGGTGAAATAGCTATCCAAAGTCTGCAGTGTCTTCCAAGGAGTGAGTTCAGAAGCACTCTTGAGAACATGGTGAAATATAATCTAGAAAGGATTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018513

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018513&oldid=47269"