BGIOSGA018543

From RiceWiki
Revision as of 02:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018543| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018543, complete gene.| tag = OJ1212_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018543

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018543, complete gene.

LocusTag

OJ1212_C10.15

Ensembl Transcript ID

BGIOSGA018543-TA

Ensembl Protein ID

BGIOSGA018543-PA

Length

5195

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8095521..8100715

Sequence Coding Region

8100460..8100715,8096411..8096478),complement(8095917..8096072,8095521..8095817

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8095521..8100715 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8095521..8100715 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTCGGTCGTCGTCGTCGCCGGCGAAGACGACGACGACGCTGGCTTTGCTGCTGGTGGTCGCGGCGGCGGCCGCTGCTGTGGCGGCGGAGGCGGCGGCCGTGGCGGCGGACGCGGCGCGGGGCGTCCGGCAAGTGAACCGGCGGGGCCCGTACCTGGGCGTGGTGGTGCCCAACGGGTTCGAGATGGAGCCGCTCCTCCGCTCGCCGGCCTTCTCGCCGGCCAAGAAGCTGCCATACCTCGACGTCGCAGGAAGGAGATTTCGCTTCGGATCGATAGGAGAGAAGAAGGTGATCATCGTCATGACAGGCCTCGGCATGCTCAACTCCGGCGTGACCACCCAGCTCCTCCTCACCCTCTTCGACGTCGAGGGCATCGTCCACTTCGGCATCGCCGGCAACGCCGACCCCGACCTCCACATCGGCGACGTCACCGTCCCCCGCTACTGGGCGCACACCGGACTCTGGAACTGGCAGCGGTACGGCGATGGGCCGGAGAAGGAGCTCGCGCTGGAGTCCAATGGCGACTACACGAGGAAGTACGGGGCGCTCAACTTCTCCGACTACGGCGTCGCCGGCGGCGGCGGCGGCAACCTGCTGAACGGCGTGTGGTACCAGCCGGAGGAGGTGTTCCCGGCGGACGGCACGCCGGAGTCTCGCCGCCACGAGTTCTGGGTCCCCGTCGACGGCCGGTACTACCAGCTCGCCCAGAAGCTGGAGGCGATGCCGCTGGAGCGCTGCGTCACCGCACCGGGACGGCGACGTCGCCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAARSSSSPAKTTTTLALLLVVAAAAAAVAAEAAAVAADAARGVRQVNRRGPYLGVVVPNGFEMEPLLRSPAFSPAKKLPYLDVAGRRFRFGSIGEKKVIIVMTGLGMLNSGVTTQLLLTLFDVEGIVHFGIAGNADPDLHIGDVTVPRYWAHTGLWNWQRYGDGPEKELALESNGDYTRKYGALNFSDYGVAGGGGGNLLNGVWYQPEEVFPADGTPESRRHEFWVPVDGRYYQLAQKLEAMPLERCVTAPGRRRRR</aaseq>

Gene Sequence

<dnaseqindica>1..256#4238..4305#4644..4799#4899..5195#ATGGCTGCTCGGTCGTCGTCGTCGCCGGCGAAGACGACGACGACGCTGGCTTTGCTGCTGGTGGTCGCGGCGGCGGCCGCTGCTGTGGCGGCGGAGGCGGCGGCCGTGGCGGCGGACGCGGCGCGGGGCGTCCGGCAAGTGAACCGGCGGGGCCCGTACCTGGGCGTGGTGGTGCCCAACGGGTTCGAGATGGAGCCGCTCCTCCGCTCGCCGGCCTTCTCGCCGGCCAAGAAGCTGCCATACCTCGACGTCGCAGGTATACATACGAACTATATACATCACGCCTACATTAGTTAGTAAACGATGAGTAGGCACATAGGGATACAAGAGGGGCGGACAAGCGCGCTTTTTTCCCGCTTATCCCACTTCTAGTTTATTTTTTCTTCGTACTATATATCATGCAAAAAAATAGACTAGCATGCAAGCGGGTTTTTTTTTTGATAGTGGGACTACCCACTTGCATGCATGCCTATAGGCACACACTCGTGTACGCATATAAGCATGAACTAATTAATTTGTGCTCTGTTTGTTGGAATTACGCAAAATGTATAGTAACTAAAATAAAATTAGACACATTGTAAACTATAAATCTGAACGTACCTATTGAGGAATCTAGACATACCTATCGGGACGAAGGTATTACCATACCCTTGTTTGATTATGTAATTCCTTTAGTGTAGATGCTTGCTTTTTTGGGAGTACTCCCCCAAAAACTCAGCGTTTGTTTTGGTAGAAGCTATAACCAATTAAAAAGTTTGCAACTCAAATATTTGCGTGAATGAAACCTGTAGATGTTTGAGTTGCATCAACACTTAATCCTATTAATATATATATGGTGAAAAGACATTATTATTCAACACTTAATTCCTATTACTATATATCTCCATCTTAAAATTGGTGAAAACTTGCATGACCACCATCATTCTGGCACAGGAGCCTGAATGTTTGTACCTAAACAGTTAGCCGCTTTTTTTTTTTTTGAGAACCACAGTTAGCCGCTTGATGTTTGGAATGGAAAACATAGGTAGACTGAAACATTCACTATAAAAAACGGATATACATGTCGATATTATAGGTCCCGGAATATCTCATATATAATCCTGTAAATTTTTTCATCCGATCAGATTTTGTTAACAAGTGAGAGATAGAACCATATATTTATGCAAGAATTAACAGGTTGCCAAATGCGAATGTCCGATAAATAAACCTTAATTAACGTCGTGTTTGAGAGAGGAAAGTGAGAATATTGAGAACATACGTAAAACGAGATGAGTCATTAGCTAACACATGACAAATTGAGTATTAATTATTTTAAACTTAAAAATATAGATTAATATTTTTTTAAAAAATAACTTTCGTATAACGTACCATTTCACGGTTTTGGGAAGGTTGTGCGAAAAAACATAGACTTTTCAATAGTTCTCTCGAGAGCAACCTAATTATACAACAAACACATCGGAAAAGTATGTCGTATTGTTCTTGATTGGATAATCGTGTAGGGAACGACTCTTCTGTACTCTATATCGAACAAACACGTAGCATGTACGATTTTTTATGTTGGATTAAAACTGCGGTCTGCGGACATACGTGTTGTAGATTTCTTCACGCATTTCCTTTTCCAAACAATCGCTTTACGAATTAATTCCATGTTGTTCAAACAAATCTTCTGCAAATGAACTACTACTAAAAGAATTGCACGTGATATCACTGCTGCATATATATGCTTATACAATATGAGTCAGAACCAGTGGGATTTGAGATCGTACTATATTTAATTTTCAAGAAGATAATACTCCACAAATAAGTAACGATGTTTTATAATAATACGTGTAGTCAACATATTTAAAAATTTTACCATTAATTTCTCTTTGAATATTTCAATTCAATTTTTTGAGAAGATATATCTAACATGCAAGTTACAAGGCAAATAAAAATTATACTATTGTTAAAAATGGGTTGAATACGTATGTTTATTTAATCCAAACCAATGGATGCATATAGGAATGTGCATGTATATTAGTCATCCCATACTTGCGCATGCACAATTAACACATACATTAAGGAAAAAAAAACATCCCTCATTCGATCGGTCAGTTGTGATTTATTCTCTACCATATTCAACTTGCTACAGATGCATGTAACGTACGGTAGGATTATTTAAATGATTGATTACTGTGGGCGACGTCGTCAGGATCAGCTCAATCATTAATACTTGTAGCATACTTAAAAAAAACCAGCATAATACTGGATATGACATATTCTAATGCAATAAATTTGAACATACATGTGTTTAGATTCGTTATACTAAGATGTCACATCCAGTTTTAAATTTTTTTTTATTTTTTTTAGACGAAGGAAGTATGTGTTAATTAGTATATCCACTTCAAAATATATGTCAACTTAGAACTAAAGAAACACGTTACAACAGTATCTAGATTACTCCCAACATAAAAAAAGACAAACCCTGATTTTCGTGCCCAACATTTGACCATTCGTCTTATTTGAATAAAATATGAAAAAAATTAAAAAGACAAGTCACGCATAAAATATTAATCATATTTTATCGTCTAACACCAATGAAAATACGAATTATAAAAAAAATTATTAAGACGGACAGTTAAAGTTGGACACGGAAATACAAGATTTGCCTTTTTTTAGACGGAGGAGTATTTGTATAGACTTTTATATGTCAAAAGATGAGAAAAGGAAGTATGTGTTAATTAGTATATCCACTTCAAAATATATGTTAACTTATGACTAAAGAAACACGTTAAAACAGTATCTAGATTACTCCCTACAACCAAAAAAAAAAAAGACAAACCCTAGTTTCCGTGCCCAACGTTTGACCGTTCGTCTTATTTTGAAAAAATATGAAAAAAATTAAAAAGACAAGTCACGCATAAAATATTAATCATGTTTTATCATCTAACACTAATGAAAATACGAATTATAAAAAAAATTATTAAGACGGACAGTTAAAGTTGTATACAGAAATACATGGTTTGACTTTTTTTAGACGGAGGAGTATTTGTATAGACTTTTATATGTCAAAAGATGAGAAGAGGAAGTATGTGTTAATTAGTATATCCACTTCAAAATATATGTTAACTTATGACTAAAGAAACACGTTAAAACAGTATCTAGATTACTCCCTACAAAAAAAAAAAAAAAGGACAAACCCTAGTTTCCGTGCCCAACGTTTGACCGTCCGTCTTATTTGAAAAAATATGAAAAAAATTAAAAAGACAAGTCACGCATAAAATATTAATTATGTTTTATCATCTAACACTAATGAAAATACGAATTATAAAAAAAAATTATTAAGACGGACAGTTAAAGTTGTATACGGAAATACATGGTTTGACTTTTTTTAGACGGAGGAGTATTTGTATAGACTTTTATATGTCAAAAGATGAGAAGTTGACGACGTGTACCTACCTAGCTAGCCATGTGGCCAAGTTGCTAAGCTTTTACTACTACAGTACTACTCTTCTACTTCGTTTCCTCTACTAATCGTCGGGTTTAATTTCAACTCGTTTAGGCCATGCATGGCGTGTACGAACGCATACCATTGACCAGCTTGAAGATCAAACAGATTATGATAAGCTGTGTACGTACGTATATAAATGCAAGTAGTCACAACTGCTTGTTTGCGACTCTCTCACAATCTTGATGAATAAATTGATCGCCAGATTTACAAAATAAAATTAGTGGTTCATCACCATCAATTAGTAGTAGTAGTATCGATCTTTTTCTACGAGTAGTACATGAGTCGACGCACCTGCAGCATGGCTGTATATATGCTAACACGCACAGAGCTGCAAATGCCCCTTCAACCTAAACTCAAAAGATTACACAGACCAGCGAAATTAAACTTTTATTTAAACTTTGAACAAATTTGCATCAAAATCCACGAAAATTAAATTTTATTTTTAAATTTTCATCAAAATCCCAATTTGAATTGAAGAATTTCAAGTGGATCATAAATTTCCACATTACAGATTTTCTCTCCTTTTTTTTGCCAAGATTTTGAATTATGCACCAGGCTTGAGCTTAATTTATAGCCCAAACCAAGACTGCCAGCTGGGCTGCCTCAAACTCAGGCCCATTAGCACCCCCAAACCAATACCCATCAAGTTGTTCTTTCTGTAGTAGAAAAAAAAAAGAAAAAAGGGACGACATCAATCAAGTTCGGTTAAATATTTTTCTCACCAAAACCACATGTCTTTCCATGTAGGAAGGAGATTTCGCTTCGGATCGATAGGAGAGAAGAAGGTGATCATCGTCATGACAGGCCTCGGCATGGTAAATACTTGTACACCTTCATTAATTTCATTACCTAATTAAACCGTATACTTATACTACCTCTGTCTTTCAATAGATGACACCGCTAATTTTTTATCACATTTTTATCATTTGTTTTATTAAAAAAATTCACGTAATTATAATGTATTTTATTGTAAATTATTTTATCTCTTAAAATAAGTACGAATTATATCTTATATATTTACATAAAACTTTTAATAAGACATGATAGAATTTAACGGCGTCATAACTATCATAGAGTAGATTGTGTCAATTACCTTAATTATTAATTCCATTGTGCCAACCTGATCAACTGCCGCGGCTTCATACGAACGCAGCTCAACTCCGGCGTGACCACCCAGCTCCTCCTCACCCTCTTCGACGTCGAGGGCATCGTCCACTTCGGCATCGCCGGCAACGCCGACCCCGACCTCCACATCGGCGACGTCACCGTCCCCCGCTACTGGGCGCACACCGGACTCTGGAACTGGCAGGTGAATGATTGATTAATTAATTTCATCAAATTTCATCCAAATCAAGAACAAATTGGTTTTGGTGATTTGATCGGTGTTCATTAATTAATTCGGACACAGCGGTACGGCGATGGGCCGGAGAAGGAGCTCGCGCTGGAGTCCAATGGCGACTACACGAGGAAGTACGGGGCGCTCAACTTCTCCGACTACGGCGTCGCCGGCGGCGGCGGCGGCAACCTGCTGAACGGCGTGTGGTACCAGCCGGAGGAGGTGTTCCCGGCGGACGGCACGCCGGAGTCTCGCCGCCACGAGTTCTGGGTCCCCGTCGACGGCCGGTACTACCAGCTCGCCCAGAAGCTGGAGGCGATGCCGCTGGAGCGCTGCGTCACCGCACCGGGACGGCGACGTCGCCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018543