Os09g0356000

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0356000| Description = Protein kinase-like domain containing protein| Version = NM_001069501.2 GI:297609324 GeneID:4346833| Length = 9154 b...")
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Gene Name

Os09g0356000

Description

Protein kinase-like domain containing protein

Version

NM_001069501.2 GI:297609324 GeneID:4346833

Length

9154 bp

Definition

Oryza sativa Japonica Group Os09g0356000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12031931..12041084

Sequence Coding Region

12031931..12032324,12032534..12032726,12032876..12032944,12033320..12033446,12033685..12033947
,12034039..12034196,12034532..12034603,12034696..12034834,12037319..12037785
,12038882..12038932,12039243..12039807,12041015..12041084

Expression

GEO Profiles:Os09g0356000

Genome Context

<gbrowseImage1> name=NC_008402:12031931..12041084 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12031931..12041084 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcttggctttcttcgccgtactcgtcttagcaacggcggtcgttcctgccgtcagccagcaaggatacctgagcatcgactgcggcctggaggccaacagcagctaccaggacgacaacaggatcttgtacgtgcccgacggtccgtacgtcgacggcggggagaaccacaaggtggcggcggagtacgcgtccagcttccagcgcccagaccagacgctccggagcttcccctccggcgtacggaactgctacacgctccccaccgccgccgggtccaagtacctggtccggctggtgttcgtctacggcaactacgacggcaagaacatctcctcctcctcctcgtccgcggcggcggcggcgctcaggttcgacctgtacctcgggctgagccgttggaccaccgtgcagggcggcaccggcagcggcggcgaggtgcacgaggcggtgttcgtggcgtgggcgagctgggcgcccgtgtgcctcgtcaacaccggcagcggcacgccgttcgtgtccacggtggagctgaggccgctcgtggattcgctctacccggctgtcatggccaaccagtccttggccatgcttcgacggcgtaatatggcggcaaacaatttcatacggcggcaccttgtgtggtcctcctgcaaaaatcatgcctacagaaaaaatatgtatcctgacgacccatatgaccggtactggtggccaatgaatgctgaccccgcatgggccaacctttcaaccacgtcaaccattaagactggatccacatttgcggtgccctcgagtgttctccaaacggccgttacaccatccggaaacagtacggtgcttaacgtcataagctggcaagacacaacggccaaagagtatgtggtgtacctgcattttgccgacttccagagcagcaaactccgggagtttgatgcttaccctgatgccaaccaggtagtgtacaattacaccccacattacttgttatccagtagcgtgtacacacccttgttcagggccattgctggtgagtataatattactcttgccgccactgccaactctgcgttgccccctatgctcaatgctttcgagatctacttcctcatcacctacgacggcacgacaacgttctccaaagactttgatacaatcatggctattaaactcgagtatggggtaaagaagaactggatgggtgatccatgttttccacctgaatttgcttgggacggcatcaaatgcaggaacaccagtggtaacattatgaggataatatcgattgatctctccaacagcaacctttttggggtgatatctaataacttcacattgcttactgcactcgagaaattttatggatctgatggaaatatgtgcaacaaaacaataggttcgtctccatcaagaaacagaacgggtatcttagctatttcagtagtggtgcctgtgctggtagtggctctacttgttcttgcatatatgatctggagagtgaagagaaaacccaatattcctacgtatgttcctcctcaagtaccagatatcaagacttcgccagaaaggaaaacaaatccttttgatcctctgcaaataactgaaagtcggcaattcacatacgaggagctaaagaagtttactaataacttccaacagttcattggacgaggaggctttgggaatgtctattacggctgtttagaaaacaaaaccgaggttgctgtcaaaatgctctctgaattctcggagaatggccttgatcagtttttagccgaggttcagagcttgacaaaggtgcatcacaaaaatctagtttctttggttggttattgctgggaaaaggatcacttagcactggcttatgagtacatggctagaggcaatctttgtgatcatctaagaggtaaatttggtgttggtgatacctttaactgggtaacccgtgtgcgagttgtgcttgatgctgcacaaggtctggagtatctgcacaaaggttgcaacttgccaataattcacggggatgtgaagaccaataatgtactcttgggtgaaaatctaaaagctaaaatcgcagactttgggctttctaaaacttatattagcgagacacagactcacatatcaaccagtaatgccgctggaacaatgggttacatcgaccccgagtactatcatactggaaggctgacagagagcagtgatgtttatagcttcggtgttgttctactagaggtagccaccggtgaacctccaatactacctggcagtggccacatcattcagcgtgtgaaacagaaagttgcatctggtaatatcagcttggttgccgatgcacgactcaaagatttgtacgacattagctccatgtggaaggtggttgatactgcaatgctctgcatatcagaggttgctactcaaaggccaacaatgtccaccgtggttctacagctgaaggagagcttggcactggaggaagcccgtgacagcagggacatcacgacaagctcagttagtgatgccatggatgtgttgtcaaaatttggtccatcggcaagatga</cdnaseq>

Protein Sequence

<aaseq>MEFLAFFAVLVLATAVVPAVSQQGYLSIDCGLEANSSYQDDNRI LYVPDGPYVDGGENHKVAAEYASSFQRPDQTLRSFPSGVRNCYTLPTAAGSKYLVRLV FVYGNYDGKNISSSSSSAAAAALRFDLYLGLSRWTTVQGGTGSGGEVHEAVFVAWASW APVCLVNTGSGTPFVSTVELRPLVDSLYPAVMANQSLAMLRRRNMAANNFIRRHLVWS SCKNHAYRKNMYPDDPYDRYWWPMNADPAWANLSTTSTIKTGSTFAVPSSVLQTAVTP SGNSTVLNVISWQDTTAKEYVVYLHFADFQSSKLREFDAYPDANQVVYNYTPHYLLSS SVYTPLFRAIAGEYNITLAATANSALPPMLNAFEIYFLITYDGTTTFSKDFDTIMAIK LEYGVKKNWMGDPCFPPEFAWDGIKCRNTSGNIMRIISIDLSNSNLFGVISNNFTLLT ALEKFYGSDGNMCNKTIGSSPSRNRTGILAISVVVPVLVVALLVLAYMIWRVKRKPNI PTYVPPQVPDIKTSPERKTNPFDPLQITESRQFTYEELKKFTNNFQQFIGRGGFGNVY YGCLENKTEVAVKMLSEFSENGLDQFLAEVQSLTKVHHKNLVSLVGYCWEKDHLALAY EYMARGNLCDHLRGKFGVGDTFNWVTRVRVVLDAAQGLEYLHKGCNLPIIHGDVKTNN VLLGENLKAKIADFGLSKTYISETQTHISTSNAAGTMGYIDPEYYHTGRLTESSDVYS FGVVLLEVATGEPPILPGSGHIIQRVKQKVASGNISLVADARLKDLYDISSMWKVVDT AMLCISEVATQRPTMSTVVLQLKESLALEEARDSRDITTSSVSDAMDVLSKFGPSAR</aaseq>

Gene Sequence

<dnaseqindica>8761..9154#8359..8551#8141..8209#7639..7765#7138..7400#6889..7046#6482..6553#6251..6389#3300..3766#2153..2203#1278..1842#1..70#atggagttcttggctttcttcgccgtactcgtcttagcaacggcggtcgttcctgccgtcagccagcaaggtttcttttatttttacaagcttatatatattttcggagcgtttgcagcggaatttttattttaaaaagtaatattatcatgcattaatccttctagtttacaccagtatataccatctcttatttcttttctacatatagtctttaactgattggtgggcctttgcccccaaactatattttttttcttgacaaaaagaagcaaggagttagtggtgcggagtggtgacaaaattcaccactcacccgtatcactagcttcttttaaaatatcgattggttttctgaataaactgaaagaaccgactaaaagaatcaagtagttagttaaaaatcatcacttggtttcttgttgatcttcattctcaacccctatctatttacatggataatcaataaaatagtgaacaacacttattaccccaagcaattgcaaagcatatccttaccccagtggcgaagacagagatatttttgagcccgaacaaatttcaatatactagtaggagtatttgctataaaaattcattatcaatttaaacatcaatattaaaatttaatgaagttttcaccggcgagcccgagcgctgcccgggctaaccgggcggtaactccgccactatagagccactgcccttacaagtattatcttaaaaaaggatatactccctccatcctaaaatataagtatttttacacattgatacaatctacgagatgctactttgagcaataatatctatataaataagatattttaaattaaaaaagttgcatattatgatagtttgttcaatgataaatctagtaacattaattttacatgattgctattttttattctatttctatttatagcccaagttaaaaatatttaacctgtcactattctaaaaattaatgcttatatttgggatgtaggggtatcatttattccctccgtcccaaaatataataacttctagcatctaggatttatctcaaaatataacaacttctgcaccaacattctcttttcaacccatcataatcctctatcattcaaatttctcgcataccttcatttctcatccaatcacaaccctccctattcaattctacatatctcttttttaataaccgtatccaactttaaagatgtttatattctgatacgagagagtagtttcttatttccttaacttgcggcgtgtaacctaccttgcaggatacctgagcatcgactgcggcctggaggccaacagcagctaccaggacgacaacaggatcttgtacgtgcccgacggtccgtacgtcgacggcggggagaaccacaaggtggcggcggagtacgcgtccagcttccagcgcccagaccagacgctccggagcttcccctccggcgtacggaactgctacacgctccccaccgccgccgggtccaagtacctggtccggctggtgttcgtctacggcaactacgacggcaagaacatctcctcctcctcctcgtccgcggcggcggcggcgctcaggttcgacctgtacctcgggctgagccgttggaccaccgtgcagggcggcaccggcagcggcggcgaggtgcacgaggcggtgttcgtggcgtgggcgagctgggcgcccgtgtgcctcgtcaacaccggcagcggcacgccgttcgtgtccacggtggagctgaggccgctcgtggattcgctctacccggctgtcatggccaaccagtccttggccatgcttcgacggcgtaatatggcggcaaacaatttcatacggtatgttcggagtcaacgacaactttctatcttttttttttaacgattgttaattagccggttttctcagaatatgtgtaggattaactttagtagtactactagaaaaaacatttttcgcagacgtgaaatttttttccagacgggtatggtcctcggagccaaatggccgcctgcgacattgtaaaccggggtggagctagccatccgcatgaatatatttttacaagcgaaccacttaagaggtccgtctgtgaaaatacctttaagaatcttaagatgtccgcttggaaaaatatgattttcttaggcggcaccttgtgtggtcctcctgcaaaaatcatgcctacagaaaaaatatgtaagtcccatctttatcttctcctacaccatccttaccctctccaccaatcattttcctcctccccctctctctctcttccttcccggtagatgcgggtcgcgtgacggtctccctttcccggtgacggcggcagctcaacgacgaggaggggaggcatcgcccgtgacgaggaggggagggaaggtggcggctcagctcctccctctcctggcgacggcggcgactcaacgacgaggagatcgcgacgacgatgacgacgccttctggatccgccaccggccggtctcggggagggaaggtagcggcgacgcgaggaggtgaggggaggggaggggatgtggcggctcggctccttcctctaccagcctggcaacggcggcgatgaggagggctagcaatggcttgacgacgaggaggggaggcagcaactgtgctccaaccctctccctcccttcctcccagatccgtccaccgccgccggcggtggcaggtaggggtggtggcgacgaatttttttttcttcgcgaaattattttcgtaggctggtggatctaccgcctatgaagatggagatgccgtctgcgaaaatcatctattttcgtaggcctttgtttatatgcggctctttccccgcctaagaaaactatttttggccacctgggaaaatgattttcctagtactgtagcttccgtggactgtggtgcaggaaatacaaatttaactgaaattggcacttagatatatctagtagaagaaatacacaggtaaaaagtactccgtaaaactatgataaagaataatgtacattgaaagagtgcagtgtacgtatgtccatggtaattcaattccttatagaaaataataaagtctataaagataaaatattttagtacctacacatacgaattcaactacatatatgcagagaaaacaaagcatttaatttgttgtctttagaggctgaatcttgagcattttttgctacaacaaaataattacgaagatatattgaggaggatgttcgatctctaaattaaacactaaggacaaaacgctgcgtatatatgatttgttttaatttcttaaatataggtatcctgacgacccatatgaccggtactggtggccaatgaatgctgaccccgcatgggccaacctttcaaccacgtcaaccattaagactggatccacatttgcggtgccctcgagtgttctccaaacggccgttacaccatccggaaacagtacggtgcttaacgtcataagctggcaagacacaacggccaaagagtatgtggtgtacctgcattttgccgacttccagagcagcaaactccgggagtttgatgcttaccctgatgccaaccaggtagtgtacaattacaccccacattacttgttatccagtagcgtgtacacacccttgttcagggccattgctggtgagtataatattactcttgccgccactgccaactctgcgttgccccctatgctcaatgctttcgagatctacttcctcatcacctacgacggcacgacaacgttctccaaagactgtaagctcactcaattacgctctctcgcactaaatgtgcaccaacattgctccaaaatatgggttaaacgcatgtatgctatagaagggtttcacctattgacatatctgtcaatatgctattgattttttaaaattactataatgccgttagtttggtgatgaagatgtcactatttctcaatcagccatttcttttgttaaaattactataatgccattagttttgtaacgaagactaaaaatgccattctgccgaagtgtcactgttagatcaacaataattaacacaggttgagggccctttggatttttgaaggatttgtggaggattgaaatccttagaaaatttttcctacgaggccatttggatcaaaggaactggtatctcagaattcctatggattgatttcctatgcccccatcctgtaggaaaataaacataagctcatacctcatgctttttttttaacctttgagaagcccaatgcactctcttcctttctccctctaatttctctctagcacaaacaattttctttagaattcccatgttttgatttctcgcgaaccatccaaacacaccaattctagtatgctttggaaccctgtaggattgtgttgaacatgacatcctcttcatgcattttcatgtttgcatgtttttagagtcctgccttccaaaggagccatgactgtttatgaaaagcacctataagaaaaaggaaaacatacatggcagtttgcactactatattaatatttttcactgctagaagctttcctttccataggcggctcaaatttcaagccgccatggctgaggcttctttatggtcatggacgacatgtgaaaacctatatctgcatacagttcttttaaaaaaaatgcctgtggagacaagaaaactgcatatgaaaatcattatttttggagatgatcctgaagaaaactttctatgagaataggatgatttttaaaggtgatttgcttaagaaaccgcttgcaaataatcaattagtgcagacagatctttaggaagtctgcctacggaaatatttttcctcataatattttctgtgtaaatactcaaactatcaaaattgaaagatttcattttaagtccaattgaggtgaaccaaagcttacaatatttcctttaatatggtcagatcaatatttttagaattgtttaaatgtggtggtatatatgcatattaagattagtgaatgatcatattaaagaaaatattccaaggaaatattgatctcataatatgaaaaaaaaaagcattgtaagggtccaagagaactttgatttacgtcaatcgaatttaaaatgaatttagtttggacagttttaaaggataacagaaaggtttccacaagcttactttacagagaatcgcctgaattaatcagcagacattttagagaatcgtctgtacaaatcaattagtgcatacggtccggatgaatttccaacatagtagtgaaggtgatgaataataatgcctacatcgccagcagcccaaatggcatcaccgggtggaagcaggggcaccattgcttgagcagcagaacccctcacctgacttggttagtttttttttttagattgacttggttagttaatctcctacacactgtgtgaggattctctatcataacgttagtatcattatcattatagtcactgatatatgggtcccacccttctattaccccacatatcaattactataataatagtgttattatggtagaggatatgaacccgtgaacactacttgggcaggacttgcctcctgcaacttctcaccttctcctagccgctgcctggcttgtgcgcattcgaggtattcgatcaaattaacggtaaggttggctctctggtcagtgccttaggccgagtttagttccaaactttttcttcaaactttcaatttttccatcacatcaaaactttcctacacacacaaacttccaacttttccatcacatcgttccaatttcaaccaagcttctaattttgacatgaactaaacacacccttagtggatcccacttcccacatgttggtgtccattgggcttaaaaagatcaagggagggagtggacaattatcccactgttgtctgcttcgatcgaactgagaattctttcttgaatcaggcatttttgtctcaacaaaagtctaagacactagggaagttctaacagttaatggagacatggattgttcatgccatgtttttgaaagtacgatttctcaaaaaaaaaaaaacaagaagaagaaactttctacatcaactacaagataactttctttagttatattttcaccttataatatttgattcatccatatgagcaattttttcctctgcccatatctatagtcacctagttagaatgcaccctgagagtatatggtgcctttaatcatttaataaactctgtaccttccttttcctatgctagttgatacaatcatggctattaaactcgagtatggggtaaagaagaactggatgggtgatccatgttttccacctgaatttgcttgggacggcatcaaatgcaggaacaccagtggtaacattatgaggataatatcgatgtgagtagtactccgaagatcctagatgcattacaattgtgtatagttggcaccttttgccttatgttggattactttttttttttttgcagtgatctctccaacagcaacctttttggggtgatatctaataacttcacattgcttactgcactcgagaaattgtaagtagcgacattttcatcaaatccatccacattcgtttagctatatatggaattccatttgacattaatggggactagagaatttgaaaagatatttttttgttgttactgagaaaggactttgttaaatatctaaatttcatgtcacttttcacagaaatttatcaggcaaccaactgaatgggcccattccagactctctctgtaaaaacaatgcaggacaattcgttttcaggtttgggtagtcttgttaacttttgctaattaatattttgatccaggtatgttgctaaaacaaaccctgaactgttggttttatataattattacagttatggatctgatggaaatatgtgcaacaaaacaataggttcgtctccatcaagaaacagaacgggtatcttagctatttcagtagtggtgcctgtgctggtagtggctctacttgttcttgcatatatgatctggagagtgaagagaaaacccaatagtgcgtatgctcttctcctcttataagctctactgaaatatcttggttattaagttatttctgttatataactggctttttgcacaaccagttcctacgtatgttcctcctcaagtaccagatatcaagacttcgccagaaaggaaaacaaatccttttgatcctctgcaaataactgaaagtcggcaattcacatacgaggagctaaagaagtttactaataacttccaacagttcattggacgaggaggctttgggaatgtctattacggctgtttagaaaacaaaaccgaggttgctgtcaaaatgctctctgaattctcggagaatggccttgatcagtttttagccgaggtatcaaattttagttactgaaaaattaaatatacttgtaaataaataactctatttgattaataaaaattaacaatagtagattccacacaacttggaaaaaaacgttaagaatatatttccaaattttagatggcacacatgtaaatgtaaacttagtgactttcattcaaactaagactacattcaaatagagagattattagattgaccgtatattttgtatctcatgacataggttcagagcttgacaaaggtgcatcacaaaaatctagtttctttggttggttattgctgggaaaaggatcacttagcactggcttatgagtacatggctagaggcaatctttgtgatcatctaagaggtttgtctgttacaaacttatgtgttgcttgagaataaagtgtcaccatcctccgtctgtttttaaaattgcatatatgaaataattgtgcagtgtttgtatctctatctgggtaagcaatgaagaatatcaaactctagtcaagttctccacaacctagattctcccctcatcccaacaaagccaacactgtctgactatcttctcggcagtgtttacccaatggctctatatttacaagaactcattgcattttgacaatttgatggttcaattttgattagtttgtgcagtttgcataaatttgctcattccacacttgaactgaaatacttggtaaaggtctatttttacagtcaatgttcttatatgaaggtaaatttggtgttggtgatacctttaactgggtaacccgtgtgcgagttgtgcttgatgctgcacaaggtatgcttaaaacaaaacacaaagataattatttctcttaaggaatattatagctcatgccactcttttttttatttgttttctttttgagctagtgccactctttttctcattatagagttttgtgatttggtacactataaatataggtctggagtatctgcacaaaggttgcaacttgccaataattcacggggatgtgaagaccaataatgtactcttgggtgaaaatctaaaagctaaaatcgcagactttgggctttctaaaacttatattagcgagacacagactcacatatcaaccagtaatgccgctggaacaatgggttacatcgaccccgagtatgcttttctgtccatcccattaacattttacttatttaatttgcatcaatttgaatgagtaaatcataaacaacttgatttaattttataagtttagcatgtttgaaagaaaactcataaattgattgtcatgttttcaaacacatttttatcttaatctcttcaagctatccttagttttattaatacactacatgcatttttaggtactatcatactggaaggctgacagagagcagtgatgtttatagcttcggtgttgttctactagaggtagccaccggtgaacctccaatactacctggcagtggccacatcattcagcgtgtgaaacagaaagttgcatctggtaatatcagcttggttgccgatgcacgactcaaagatttgtacgacattagctccatgtggaaggtggttgatactgcaatgctctgcatatcagaggttgctactcaaaggccaacaatgtccaccgtggttctacagctgaaggagagcttggcactggaggaagcccgtgacagcagggacatcacgacaagctcagttagtgatgccatggatgtgttgtcaaaatttggtccatcggcaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0356000, RefSeq:Os09g0356000