BGIOSGA018563

From RiceWiki
Revision as of 02:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018563| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018563, complete gene.| tag = B1003C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018563

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018563, complete gene.

LocusTag

B1003C08.3

Ensembl Transcript ID

BGIOSGA018563-TA

Ensembl Protein ID

BGIOSGA018563-PA

Length

3957

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7735248..7739204

Sequence Coding Region

7739095..7739204,7736469..7736733),complement(7736179..7736378,7735894..7736081),complement(7735248..7735534

Genome Context

<gbrowseImage1> name=IndicaChromosome05:7735248..7739204 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:7735248..7739204 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGGTGCGGCGGCGGCTGGGTGGCTCGGCTGGCTGCGCTCCTCGTCGTCGGGTTCGTGCTCGGCTCCGTCGACGCCAGCCTTGGCGATGTTGATCCGCAGTACAGAACTTGCGTGGAGGAGTGTCATACTACAGGGATTATTGGGGAGAACATCATAAGCCACTGCCAGTCCCCAGGGAATGATGACGCGTCTGTTGGAAGTTCTTGGTACACGCAGGAGCCCCTATACATGCAGTGGAAGCAACTAAACTGTATGAATGACTGCCGTTACTACTGCATGATGCAAAGAGAAGGTGAAAGGCAATCACGTGGTCTGAACCCTGTTAAGTATCATGGAAAATGGCCCTTCATCCGTGTTTCTGTCTTCCAAGAGCCTCTCTCAGCTGCACTGTCTGCTGTCAACCTATTGATGCACTTCACTGGCTGGCTTTCATTTTTCCTGCTGGTGAATTACAAATTACCTGTTAGACCCCAAACTAAGAGGACATACTACGAATACACTGGATTATGGCATATATATGCAATATTATCAATGAACGCATGGTTTTGGAGCTCTATATTCCATACTAGGGATATAGACTTGACGGAGAAGTTGGATTACTCTTCAGCTGTGGCTCTACTTGGCTATTCTTTAATCCTTTCATTGTTAAGGACTTTCAATGTCAAGGACGAGGCTACCAGGGTGATGTTTGCTGCTCCAATTTTGGCATTTGTTACAACACACATCTTGTATCTTAACTTCTATGAGCTTGACTATGGGTGGAACATGAAAGTTTGCGTGGTGATGGCTGTGGTTCAACTTCTGGCATGGGCAATTTGGGCTGGCATAACCCAGCATCCATCACGATTCAAGCTTTGGGTGGTTGTCTTTGGTGGTGCACTTGCTATGCTTCTCGAAGTATACGACTTTCCTCCGTACAAGGGATACGCTGATGCACACTCGCTGTGGCATGCAAGCACCATTCCTCTCACATATCTCTGGTGGAGTTTCATCAAGGATGACGCAGAATTCCGCACATCAACTCTTATTAAGAAGGCAAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGCGGGWVARLAALLVVGFVLGSVDASLGDVDPQYRTCVEECHTTGIIGENIISHCQSPGNDDASVGSSWYTQEPLYMQWKQLNCMNDCRYYCMMQREGERQSRGLNPVKYHGKWPFIRVSVFQEPLSAALSAVNLLMHFTGWLSFFLLVNYKLPVRPQTKRTYYEYTGLWHIYAILSMNAWFWSSIFHTRDIDLTEKLDYSSAVALLGYSLILSLLRTFNVKDEATRVMFAAPILAFVTTHILYLNFYELDYGWNMKVCVVMAVVQLLAWAIWAGITQHPSRFKLWVVVFGGALAMLLEVYDFPPYKGYADAHSLWHASTIPLTYLWWSFIKDDAEFRTSTLIKKAK</aaseq>

Gene Sequence

<dnaseqindica>1..110#2472..2736#2827..3026#3124..3311#3671..3957#ATGGCTGGGTGCGGCGGCGGCTGGGTGGCTCGGCTGGCTGCGCTCCTCGTCGTCGGGTTCGTGCTCGGCTCCGTCGACGCCAGCCTTGGCGATGTTGATCCGCAGTACAGGTGAGTTGTGGGAGCATGCTTGTGCTTCCTTGTCTTCTTCATTCGTCTCATCGAGTTAATACAAGTATTCGTAGTTATCGTTAATTGACTTAATTCTACTCCAATTGGGGCTATGCTGGATAAGTAGGCTCTTGATTTTTCAGTACTAAGTGGTTTATCTCCTAGGAAAATGCGTGCTTACTTGGGCTGTTATTGATGGCTAAACCCTGTAGTTAGTAAATCTCAGGTATTAGGACATAGTAGCAAGTGTAGCATTGTTTGGCCCTCTAATATTTCAAGATGTCCTATTGGTTGAATTGTGGTTTGTTATCCTATTCCTACCTATTTGTGGAAATATCTGAAATACAGCTTTTTTTTCCACTCTCGAAATAAGTGTTGCTTAAGTCTTATTATTAAACCTTTTCTGAAAAAAAAATACTTACTAGTAATCATGCACATCGGATCATGTTAATGTGATACTGTGTAATTATTCTTATCTGAAACTGGAAATTGAGCATGATGGTCAAATATGGTTGTTTTGTGTGGATATGCCTGATGGGAAAAGCAACGAAACGATACAACCTGAAAGTTCATAAATGATTGTGGGTATACGGCAGACATTGTCGTAGTGAATTCTGTTTATATTCTTCACTGTCAGCTAGACAAGATTGGCTATTGTTGTCAACTGTATATCTAGTCGCACAAAAAACGTTGAATTCTTAGTTAATGCCATAGTACCTAATGTTTCACATTTCTTTGTTAGTGAAATCTTTATAGAGTACACTTATTATTGCAGCAGGAGCAGTACATCCAATGGATTATCTTTAGCTAACCATTGTGACATTGTCATAGGCTGATAGTTGCATCACTTCATGTTTGAAGTTTCTACTCTCATTATTCTGATTGGTGCCATGCTGTGAGAATATTCTAAGTTCTAAATTAGTTTTAAAAAATTACCAAAACAAAGCTATCAGTTATATATGTATTAGTGGCTCATCAGTGGTATTTCCTGAAGAACCAACTTTAACTTTGGTCCTTTCATGAGGCTGTCATTTGCATTGCCATCCTAGTCAAACTCTTTGACAAGAATGGTTGTTTTCAAAGAGTCCCGTATTAGTGTACAAGTGAAATCGAAGTTCCAAGCTGATATTTAATGGCATCAATCGAAATTTACAATTTCACTCTCTTACTCTGGAGTATGGACATTTATTCTTCGGAGTGTAACCAATACACACTATTCCAGTATTCCTAGCTGTAGGCTGATTTAAACTTGGTTATTAAGTACATCATGTCTTCGGTGGCTTAGTTATGTAAATTTGTAAAGAACCAAATCTAAAGAAACTGACCAATAAGATCATCATTTGATGTCAAGGAATTACAGAACTTTTGTTGCAGTAATGTTTCCAGAATATCTAAATTTATTACCGCTTTTTTTTTGGTATCAGATTCAGAGTGAAATATGGTTAAAAGGACAATTTTAATTACCATTGCCTTTTATTGCACAGTTGCATGATTTCATGGGTTCACAGCTGTACGTGGCAGATTGGCGGTGGGATGCCTGGAGACAGTCAGAAAAATTGAAATACAAATAACCAATAATAAATCGTTTGAAAGATACCTGCTAAACTTACCACATATGCCAGCAAATTAACCAAATTTCAGAGACCAAACTCAACAGTAAATCGATTACTAATCCTAGAAGCAGGTCTCTTTTTTGACTGATAAACAGGAGGGAGTAAGGTTCTCAAAGTGATTAAGTGATAGTCATGATAAATCGATGGTTTAGTAGTGCATGAGAACCATATAGCTTAAAATTATCATATTGAATTATCAAATTCACACATCATCTAACTCATCTAGTACCATGGCATGACATAGGAACTCCAGGGACTTGCTGCTTCCAGTCAAGGCGAATGTTCCTGCTGGCTCATCTTGCTGACAGGACTCCCTGTTGTGGACTCTGATACTCGACATATATAATCTGTGAATGTTTAATCTACTAAAATAAATACATTTTTTAGTTTTCTTATTTTTCTTGCGCCCCATACATTCAATATAATTTTTCGCGCAGTTCATTGCATTTCATTTATGGTAGCACCAGTGATATCTTCTGTTTGTTCCTCTTTTCCTTTTTCTCGAAGGGTTTGCAAAGTGACATTAGTAATTTTTCACAAGATTTTATTTCATGAACCAATGAGTGTGTCCAACATATTTTTTTGGGCTTTATGAACTGAAATTTTTTTGTTGCTTTGTTGATCTGCGAACCTTGTTCAGTTTTTATCATTCTGATGTTACCCTTTTGTGTTGTATGTATTATTTGAAGTTACTTCTATTTCTATTTAGAAGTTTTTGGTAATTTTAGCTCTGTTTGTGAACTTTCAGAACTTGCGTGGAGGAGTGTCATACTACAGGGATTATTGGGGAGAACATCATAAGCCACTGCCAGTCCCCAGGGAATGATGACGCGTCTGTTGGAAGTTCTTGGTACACGCAGGAGCCCCTATACATGCAGTGGAAGCAACTAAACTGTATGAATGACTGCCGTTACTACTGCATGATGCAAAGAGAAGGTGAAAGGCAATCACGTGGTCTGAACCCTGTTAAGTATCATGGAAAATGGCCCTTCATCCGTGTTTCTGTCTTCCAAGTATGTTTCAACTGTCATATTCCTTACTGAAACTACCATTTTCAGCTTGTCTACTTCTCAAGTTCTCACCTGTTTGTCATCCTTTATCAGGAGCCTCTCTCAGCTGCACTGTCTGCTGTCAACCTATTGATGCACTTCACTGGCTGGCTTTCATTTTTCCTGCTGGTGAATTACAAATTACCTGTTAGACCCCAAACTAAGAGGACATACTACGAATACACTGGATTATGGCATATATATGCAATATTATCAATGAACGCATGGTTTTGGAGCTCTATATTCCATACTAGGTATGAAGTGCTCAAAGCCATATGTAATGAAACTTGAGTTCATACACCATCATAATTCATAATTTGTGATACTTACACACCATTCGTCATTCTGTAGGGATATAGACTTGACGGAGAAGTTGGATTACTCTTCAGCTGTGGCTCTACTTGGCTATTCTTTAATCCTTTCATTGTTAAGGACTTTCAATGTCAAGGACGAGGCTACCAGGGTGATGTTTGCTGCTCCAATTTTGGCATTTGTTACAACACACATCTTGTATCTTAACTTCTATGAGCTTGACTATGGTAAAGTTCCTTTTCCCATTGTTGAAGCATTTTATCTTTTACCATCATCTAATGAGAATAATCCTGCTTTAGAACAAAGATCATCATCTAATGAGAATAATCCTGCTTTAGAACAAATATTTTTCTAGGCTGTAGGCTCAGTAACACCCAAATCCTCTTTTTACCATGTTCCTTTGTATTATGACCTACAAGAGCATTAACACCATATTAGCTTATGGTGTTACAAGATTTTGTCATTAGCATACTGCTTAGTAATGGCATTTTTCAGTCCTAGTTTACAAACTTGCTTTTCAGTGTGGCCATAAAAGCGTATGGTTAGGCATATGGTATTTGTATTTATCCGACATATCTTTTCTCAGGGTGGAACATGAAAGTTTGCGTGGTGATGGCTGTGGTTCAACTTCTGGCATGGGCAATTTGGGCTGGCATAACCCAGCATCCATCACGATTCAAGCTTTGGGTGGTTGTCTTTGGTGGTGCACTTGCTATGCTTCTCGAAGTATACGACTTTCCTCCGTACAAGGGATACGCTGATGCACACTCGCTGTGGCATGCAAGCACCATTCCTCTCACATATCTCTGGTGGAGTTTCATCAAGGATGACGCAGAATTCCGCACATCAACTCTTATTAAGAAGGCAAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018563