BGIOSGA018565

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Revision as of 02:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018565| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018565, complete gene.| tag = B1003C0...")
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Gene Name

BGIOSGA018565

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018565, complete gene.

LocusTag

B1003C08.1

Ensembl Transcript ID

BGIOSGA018565-TA

Ensembl Protein ID

BGIOSGA018565-PA

Length

4799

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7708427..7713225

Sequence Coding Region

7713072..7713225,7712447..7712998),complement(7712279..7712361,7711214..7711567),complement(7710424..7710678
,7710110..7710352),complement(7709797..7710018,7708732..7709296),complement(7708427..7708632

Genome Context

<gbrowseImage1> name=IndicaChromosome05:7708427..7713225 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:7708427..7713225 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGCGCCGCCTCCGCCTCCGCCGCCGCCGCGGCGGGACTTCCCGGCATTCCCGTTCGCGCCGTACCCGATCCAGTCGGAGTTCATGTCCTTCCTCTACGGCGCCCTCTCCTCCGGCCCCGGCGCGCTCGCCCTCCTCGAGAGCCCCACCGGCACCGGGAAGACCCTCAGCATCATCTGCAGCGCGCTCCAGTGGCTGGTCGACCACCGCGACGCCGCCGCACGGGGCTCGACCACCGCCGCCGCAGCCGGCGGCGGTGGGGAAGGAGACGGCGACGAGCCCGACTGGATGCGGGACTTCACGCCACTGCCGCCGGAGAAGCCGACCGCGAAGAAGGGGAGGCCCCCCGCCGCAGCGGCGCGGAGCAAGGCGCCGAGGAGGGCGGCGGCGGGTTCGGAGAAACCGGAGGGGTCTGAGGAGGTGGAGGACGAGGAGTTCTTGGTTGAGGAGTACGAGAGCGACGGCGAGGTCGGCGTGAGGCGGGAGGCGGGGAAGCGGCCGCATCGCGGTGGTGGTAGCAGTAGCGAGAGCGAGGCGGATGGGGAGGAAGAGGAGGAGGAGGAGGTGACACCCAAGGTGTTCTTCACTAGCCGCACTCACTCACAGCTCTCTCAGTTTGTAGGAGAGCTCAAGAAGACGGAATTCGGATGGCGGCTCAGGACGGTGTGCTTGGGATCCAGGAAGAACTTGTGCATCAACAAGGATGTTCTGAAGCTGGGGAGCGCAAACCGGATCAATGAGAGGTGCCTGGAGCTGCAGAAGAGTAAGAAGAGCAGCAAAACTAAGGTAGAGGGTGACAACAGAAAGGTGTGCCAATCAAAGACCTCTTGTGGGTGCCCAATGATAAGAAAGAGGGGTCTACAGAAAGAATTCAAAAGTGAAGTGTCAGAGCAAGGTGCATTGGACATTGAGGATCTAGCGCAATTAGGAAAGAAGATTGGAACATGTCCGTACTACGGTGCACGTGATATGGTCCGCACAGCTGACCTAGTTGTCCTTCCTTACCAGTCTTTATTGCTGAAGTCTGCTAGAGAATCGCTTGGCCTTAATCTGAAGAACAGCGTTGTCATAATAGATGAGGCTCACAATTTAGCAGATTCCCTCACTAGCATGTACAACTCAAAGATCACATCTTCTCAGCTGAATGCAATTCTTTCCCACCTGGAGGCATATCTCAATAGATTTCAGAGTGTTCTGGGAGCTGGAAATCGACGGTACATCCAAACATTGACTGTTTTAACACGGTCATTTCTACGAGTTCTGACAAGCAACCAAGATGATGCCTGCACTATGACTTCTATGACTATAAACCAGTTCTTGTTCTCCCTTGATATCGACAACATAAATATAGTAAAGCTTTGCCAGTATGTGAAGGAAAGCAATATAATTCACAAGGTAAGTGGATATGCGAACAAATTGAACATCAATCAAGATGGTGTGAATCATTTAAGTCACCAGCAGCAATATGATGAAGGAAGCAGTATAGCAAGCTTTCAGACATTGGCTGATTTTTTGCGCTCCCTATTAAACTGCAATGATAATGGAAGAATCATAGTTGCAAGGAAAAAGTTCAGTGGACAACCTGAAGATGCTTATCTTAAATTTGTGATGCTTTGCGCAGAGAAAATCTTTTTGGAGATTACATGTGATGCATATGCTGTTATTCTGGCTGGTGGTACCCTCCAGCCTATAGAAGAAACAAGGCTACGCTTGTTTCCAAACTTACCTCCTTCTGATATAAAATTCTTCACATGCAACCATATCGTTCCTCCAGAGAGTATTCTTCCTATAGCTGTTACACGTGGGCCATCAGGCAAGGCATTTGATTTCAGCTACAGTTCAAGGAGTTCTCACACCATGATTGAAGAGCTTGGTCGCTTTCTTTGCAATGTAGTGACGACAGTGCCTGAAGGAGTGGTCATGTTTTTTGCTTCCTATGAATATGAAAGATTTGTTTATGATGCATGGGCAGCTTCAGGCATGATTTCCAAGATTTCTAAGAAGAAACATGTCTTCAGAGAGCCTAAAAACAGTGTTGATGTCGAAATGACGCTCAACAAATACAAGGAGGCAATTCAATCCTGTAGCAAGAGTTCGCAAGATACAGGAGTCACTGGGGCACTTCTATTGGCTGTTGTTGGTGGGAAAATTTCTGAAGGCATAAACTTCAGTGATGGGATGGGCCGTTGTGTTGTAATGGTTGGATTGCCTTATCCAAGTCCATCTGATGTGGAGCTGACCGAGACCATAAAGTATATAGAAAATATTTCTAAACCAGTTTTGGTTGGGGGTGATAATTCCTCAAGCAGCAAATACGATGATGAATGCAAACTTCAGCCTGGCTTTGATATATTAAGAAAGTGCAACAAAGGTGGACGAGAGTACTATGAGAACTTATGCATGAAAGCTGTGAATCAATCTATTGGAAGAGCAATCAGACATGCAAATGATTATGCTGCAATGCTATTGGTTGACTCACGTTATGCCCATACTTCATCAAACAGGAGTTCCTCTTCCCCTACTGACAAACTACCCCAATGGATAAAAACACGACTTGCTTGTGCTCAAAATTATGGAGAGGTTCATAGATTGTTGCACCAGTTCTTCAAACTCAACAGGCAAACGCATTGA</cdnaseq>

Protein Sequence

<aaseq>MPAPPPPPPPPRRDFPAFPFAPYPIQSEFMSFLYGALSSGPGALALLESPTGTGKTLSIICSALQWLVDHRDAAARGSTTAAAAGGGGEGDGDEPDWMRDFTPLPPEKPTAKKGRPPAAAARSKAPRRAAAGSEKPEGSEEVEDEEFLVEEYESDGEVGVRREAGKRPHRGGGSSSESEADGEEEEEEEVTPKVFFTSRTHSQLSQFVGELKKTEFGWRLRTVCLGSRKNLCINKDVLKLGSANRINERCLELQKSKKSSKTKVEGDNRKVCQSKTSCGCPMIRKRGLQKEFKSEVSEQGALDIEDLAQLGKKIGTCPYYGARDMVRTADLVVLPYQSLLLKSARESLGLNLKNSVVIIDEAHNLADSLTSMYNSKITSSQLNAILSHLEAYLNRFQSVLGAGNRRYIQTLTVLTRSFLRVLTSNQDDACTMTSMTINQFLFSLDIDNINIVKLCQYVKESNIIHKVSGYANKLNINQDGVNHLSHQQQYDEGSSIASFQTLADFLRSLLNCNDNGRIIVARKKFSGQPEDAYLKFVMLCAEKIFLEITCDAYAVILAGGTLQPIEETRLRLFPNLPPSDIKFFTCNHIVPPESILPIAVTRGPSGKAFDFSYSSRSSHTMIEELGRFLCNVVTTVPEGVVMFFASYEYERFVYDAWAASGMISKISKKKHVFREPKNSVDVEMTLNKYKEAIQSCSKSSQDTGVTGALLLAVVGGKISEGINFSDGMGRCVVMVGLPYPSPSDVELTETIKYIENISKPVLVGGDNSSSSKYDDECKLQPGFDILRKCNKGGREYYENLCMKAVNQSIGRAIRHANDYAAMLLVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACAQNYGEVHRLLHQFFKLNRQTH</aaseq>

Gene Sequence

<dnaseqindica>1..154#228..779#865..947#1659..2012#2548..2802#2874..3116#3208..3429#3930..4494#4594..4799#ATGCCGGCGCCGCCTCCGCCTCCGCCGCCGCCGCGGCGGGACTTCCCGGCATTCCCGTTCGCGCCGTACCCGATCCAGTCGGAGTTCATGTCCTTCCTCTACGGCGCCCTCTCCTCCGGCCCCGGCGCGCTCGCCCTCCTCGAGAGCCCCACCGGTGAGACCTCACCGCCGCCACCGCCGCTTCCCCCCTTCCGACGAAACCCTAACATTCGCGCGCTCCCCCGCAGGCACCGGGAAGACCCTCAGCATCATCTGCAGCGCGCTCCAGTGGCTGGTCGACCACCGCGACGCCGCCGCACGGGGCTCGACCACCGCCGCCGCAGCCGGCGGCGGTGGGGAAGGAGACGGCGACGAGCCCGACTGGATGCGGGACTTCACGCCACTGCCGCCGGAGAAGCCGACCGCGAAGAAGGGGAGGCCCCCCGCCGCAGCGGCGCGGAGCAAGGCGCCGAGGAGGGCGGCGGCGGGTTCGGAGAAACCGGAGGGGTCTGAGGAGGTGGAGGACGAGGAGTTCTTGGTTGAGGAGTACGAGAGCGACGGCGAGGTCGGCGTGAGGCGGGAGGCGGGGAAGCGGCCGCATCGCGGTGGTGGTAGCAGTAGCGAGAGCGAGGCGGATGGGGAGGAAGAGGAGGAGGAGGAGGTGACACCCAAGGTGTTCTTCACTAGCCGCACTCACTCACAGCTCTCTCAGTTTGTAGGAGAGCTCAAGAAGACGGAATTCGGATGGCGGCTCAGGACGGTGTGCTTGGGATCCAGGAAGAACTTGTGCATCAACAAGGGTGAGGAAGCATGAGTAATTCTCTTGTCCTGTTTTTTCTCTGGTGGATATACTGGTGTGTTGATTTTTGGTGCATTTGTGTGCAGATGTTCTGAAGCTGGGGAGCGCAAACCGGATCAATGAGAGGTGCCTGGAGCTGCAGAAGAGTAAGAAGAGCAGCAAAACTAAGGTCTGCCAATTTTGTTTTGGAATGTTTGTTCATCAATCTTTGAAGTTGAAGCCTTAGAAATGAATAGTTGTTAACTTTGTTTTGGAATGTTTTGGAATAGTTTTTAACTTTGTAGCTGAATTTGTTGCTTGGCAATTGGCATACTGAATTTATTGCTCGGCAATTGGAACACTGACGGTAGCGTTCTTTTGTGCTAAATGGCTGAATAGAGGAATGATTTATGATAAATATTTGAGGGTGCAAACGAATGAATTAACTATTATAAAGTTGAAAAAGGATTTGAAACAGTATTATAAAAAATCCATATATAGAAAGTTTTTGCAAAATTCACAGTTTAGGAGCTCGGGAAACATGACCGGTAATCCATTCATCCATTCCATTAAGCATTACGCTTGACCTTGCTTTCTTTGATGACCCCCTATTTAACTTAACTTTGTTTCTTGGTTCCCTAAAAGAAAAAACAAAACTTTGTTTCTTGGTGCTTCCATAGTAACGTGAGCTATAAATTCACAAAGTATATTCCATAGGACATCACACCTGGTGTGCTTGTAGTTATTTTTATACTGCACAATATGCTGATTTTTCAATATTGAAGCAGTGGGTTATCATACTTACATTTGCAGAAGAGTAATTGGTTAAAATACCAACAGTGTGCTACAAGTACCAGTTAATCAATAAATACTATCTATTCAAGTGGCTTTGAATATGCAGGTAGAGGGTGACAACAGAAAGGTGTGCCAATCAAAGACCTCTTGTGGGTGCCCAATGATAAGAAAGAGGGGTCTACAGAAAGAATTCAAAAGTGAAGTGTCAGAGCAAGGTGCATTGGACATTGAGGATCTAGCGCAATTAGGAAAGAAGATTGGAACATGTCCGTACTACGGTGCACGTGATATGGTCCGCACAGCTGACCTAGTTGTCCTTCCTTACCAGTCTTTATTGCTGAAGTCTGCTAGAGAATCGCTTGGCCTTAATCTGAAGAACAGCGTTGTCATAATAGATGAGGCTCACAATTTAGCAGATTCCCTCACTAGCATGTACAACTCAAAGATCACATCTTCTCAGGTATACGTCTCCGTCTCAATATGCCTCAGATATATTGTCCTGGATATCTAGATTGGTTAGCAATTGCATTGTGTTGCATCTTTTTTGCTACTATTATACCTGTTTGTTCTATCCCAACCTTTTTGTTTAATTATCCCTACTACATATCTTCATAATTTTGTGTCCTTAATGCACATCTGATAATGTTGTCCTAACTCTAAAACAGAGATATTGGAATGTTCAGCATATACAGAGGTTTAACTGTACTTAGACTTCCTCTTTGATTTCACTGTTGTGTCATGGCACACAATAAGATCATGAAAAAGATATTCTCCTGATTCATGTTTCACTAAGACCTTTTTTTCTTAAAATAAATTAATTATTATGTCAACGAAAATTGCTCCTTCTCAAATGAGCTTCGGTGGTGGCTTCCTTTTGATCTTTAATTGGGTTGTAGGATTCTACCATGATGTTCTGTTAAGAAAGTTTCAATTGTCGTGACCTTCAACTTTATAACTAACTTTGTTTCACATTCTTATTTTCTTGTTGAATTAAGCTGAATGCAATTCTTTCCCACCTGGAGGCATATCTCAATAGATTTCAGAGTGTTCTGGGAGCTGGAAATCGACGGTACATCCAAACATTGACTGTTTTAACACGGTCATTTCTACGAGTTCTGACAAGCAACCAAGATGATGCCTGCACTATGACTTCTATGACTATAAACCAGTTCTTGTTCTCCCTTGATATCGACAACATAAATATAGTAAAGCTTTGCCAGTATGTGAAGGAAAGCAATATAATTCACAAGGTGAAATATTTCTTGCACCACATGTCCATTCCACCATGCAGTGTCTAGATCAGTTGACTGTTGATTTGCAGGTAAGTGGATATGCGAACAAATTGAACATCAATCAAGATGGTGTGAATCATTTAAGTCACCAGCAGCAATATGATGAAGGAAGCAGTATAGCAAGCTTTCAGACATTGGCTGATTTTTTGCGCTCCCTATTAAACTGCAATGATAATGGAAGAATCATAGTTGCAAGGAAAAAGTTCAGTGGACAACCTGAAGATGCTTATCTTAAATTTGTGATGCTTTGCGCAGAGAAAATCTTTTTGGAGGTGCTGTAACCTTGCTTTGCATGTGACATGGGGATAATGCCTTATTCTACATAGCATGTATAGATTTATCAATTTTTCTTTCCTTCTGCAGATTACATGTGATGCATATGCTGTTATTCTGGCTGGTGGTACCCTCCAGCCTATAGAAGAAACAAGGCTACGCTTGTTTCCAAACTTACCTCCTTCTGATATAAAATTCTTCACATGCAACCATATCGTTCCTCCAGAGAGTATTCTTCCTATAGCTGTTACACGTGGGCCATCAGGCAAGGCATTTGATTTCAGCTACAGTTCAAGGAGTTCTCACACCATGGTTTGTACCATGTGCCTCAAATAATTTCCCTTTACCTTCAATACTCTAGCATATATGTGAAATTGCAATTGCAAGCTATGAGTTTATATTGCATCTAGCTACTCCTTTCCAATATATGTATTTTGAAACACCAATGCACATATATATTAATGCCTGTAGTATAACTGTAGCACTCGTTGTATGATTTATCATTTGTCTACTGAAAATATAAATTAGTCAAATGCATTTGCAACTTCATGCCCATGTATTCCTCATTGCTATAAGAATAAGGCATGATCTGAAACAAATGTACTGGAGGCTGTAAACATAAAGAAATCTAAAAATAAATTATCTACAAGTCTAAAAAATGGCATGCTGTATCATCTTAACTGAATTTGTATGTGCTACCTCATTGATTTATCTACAAGTCTAAAATTAATTGCATTGATTTTTTTTTTCATATTGCTCTATTCAAGAGCATGTATCTTGGTAGTTCTATTCTTATTTTCCCATCTGTACAGATTGAAGAGCTTGGTCGCTTTCTTTGCAATGTAGTGACGACAGTGCCTGAAGGAGTGGTCATGTTTTTTGCTTCCTATGAATATGAAAGATTTGTTTATGATGCATGGGCAGCTTCAGGCATGATTTCCAAGATTTCTAAGAAGAAACATGTCTTCAGAGAGCCTAAAAACAGTGTTGATGTCGAAATGACGCTCAACAAATACAAGGAGGCAATTCAATCCTGTAGCAAGAGTTCGCAAGATACAGGAGTCACTGGGGCACTTCTATTGGCTGTTGTTGGTGGGAAAATTTCTGAAGGCATAAACTTCAGTGATGGGATGGGCCGTTGTGTTGTAATGGTTGGATTGCCTTATCCAAGTCCATCTGATGTGGAGCTGACCGAGACCATAAAGTATATAGAAAATATTTCTAAACCAGTTTTGGTTGGGGGTGATAATTCCTCAAGCAGCAAATACGATGATGAATGCAAACTTCAGCCTGGCTTTGATATATTAAGAAAGTGCAACAAAGGTGGACGAGAGTACTATGAGAACTTATGCATGAAAGCTGTGAATCAATCTATTGGTAAATTACTGTCATTTGAACATTTAGGAATTGGGATGCTAACACTTAACACGTACTACTTAAGTAAAGTTCTTATACGATGAAATGATTTCATTGCAGGAAGAGCAATCAGACATGCAAATGATTATGCTGCAATGCTATTGGTTGACTCACGTTATGCCCATACTTCATCAAACAGGAGTTCCTCTTCCCCTACTGACAAACTACCCCAATGGATAAAAACACGACTTGCTTGTGCTCAAAATTATGGAGAGGTTCATAGATTGTTGCACCAGTTCTTCAAACTCAACAGGCAAACGCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018565

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018565&oldid=47321"