BGIOSGA018580

From RiceWiki
Revision as of 02:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018580| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018580, complete gene.| tag = OsI_189...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018580

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018580, complete gene.

LocusTag

OsI_18901

Ensembl Transcript ID

BGIOSGA018580-TA

Ensembl Protein ID

BGIOSGA018580-PA

Length

1045

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7435374..7436418

Sequence Coding Region

7436383..7436418,7435567..7436194),complement(7435374..7435522

Genome Context

<gbrowseImage1> name=IndicaChromosome05:7435374..7436418 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:7435374..7436418 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGGTCACTCGCTGCTGTCCTACTCCTTTTGGTCGCCGCCGCGGGAGCCAGCCATGCCGCGTCGCCGGCGGAGATGTACTGGAAGATCGCGCTCCCGACCTCGCCGATGCCCGGCGCCATTCGCGACCTCATCAGCCCAGCGAGCTCAGTGGGCTCAGCTTCGAAGGAGGACACGGTGGGCAACGTGTTCTTCCTCGAGAAGGACCTCTTCCCGGGCTCCAAGATGACGCTCCACTTCACCCGCGCCACCGCCGGCGCCGCGCTGCTCCCCCGCGGCCGCGCCGAGTCCGTCCCGTTCGCCTCCGAAAGGCTCCCGGAGATCCTTTCCCAGCTCTCCATCCCGGCCGTCTCGCCGACCGCCGACGCCATGTGGTCCACGCTCGCCGAGTGCGAGGCCGCGCGGCTCGCCGGCGAGACGACCAAGCACAAGCACTACTGCGCCACGTCGCTCGAGTCCATGGTCGAGTTCGTCGCGTCCAGCCTCGGCACCCGCGACGTCCACGCCGTGTCCACGGAGGTGATCAGCACGTTGACGCCGACGCCGAGGCAGGCGTACAGGGTGGAGGCCGTGAGGCCCGTGGCGGTGCCCGGCGGCGACATGGTGGCATGCCACGGGATGCCGTACGCGTACGCCGTGTTCGGGTTGCACGGGCTCAAGGGCGCAGGCGGTGGCCGCGTGCCACGGGGACGTGGACGGGCACGGCGCGGTGGCGGAGGCATACAAGAGGCTCGGCGTGGCGCCCGGGAGCGTGGCCATCTGCCACTTCCTGCCTCAGGACGACATGATCTGGGTGCGCAACTGAATTAA</cdnaseq>

Protein Sequence

<aaseq>MARSLAAVLLLLVAAAGASHAASPAEMYWKIALPTSPMPGAIRDLISPASSVGSASKEDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTEVISTLTPTPRQAYRVEAVRPVAVPGGDMVACHGMPYAYAVFGLHGLKGAGGGRVPRGRGRARRGGGGIQEARRGARERGHLPLPASGRHDLGAQLN</aaseq>

Gene Sequence

<dnaseqindica>1..36#225..852#897..1045#ATGGCTAGGTCACTCGCTGCTGTCCTACTCCTTTTGGTGAGCAGAAGCACATATATATCGCTCTTTGTATGGTTTAGTAGTTTTGAGCTAGAACAGAGATAAATTAAGTTGGGAGAGAGAGATATATTATTTAGAGATTGAACATAATACAATTTTTACTTATTCTAGTTGCAACTTTTGGCTCTGATTGTTTTCAATTCAACTTGTTTCTGACTGCAATTTAGGTCGCCGCCGCGGGAGCCAGCCATGCCGCGTCGCCGGCGGAGATGTACTGGAAGATCGCGCTCCCGACCTCGCCGATGCCCGGCGCCATTCGCGACCTCATCAGCCCAGCGAGCTCAGTGGGCTCAGCTTCGAAGGAGGACACGGTGGGCAACGTGTTCTTCCTCGAGAAGGACCTCTTCCCGGGCTCCAAGATGACGCTCCACTTCACCCGCGCCACCGCCGGCGCCGCGCTGCTCCCCCGCGGCCGCGCCGAGTCCGTCCCGTTCGCCTCCGAAAGGCTCCCGGAGATCCTTTCCCAGCTCTCCATCCCGGCCGTCTCGCCGACCGCCGACGCCATGTGGTCCACGCTCGCCGAGTGCGAGGCCGCGCGGCTCGCCGGCGAGACGACCAAGCACAAGCACTACTGCGCCACGTCGCTCGAGTCCATGGTCGAGTTCGTCGCGTCCAGCCTCGGCACCCGCGACGTCCACGCCGTGTCCACGGAGGTGATCAGCACGTTGACGCCGACGCCGAGGCAGGCGTACAGGGTGGAGGCCGTGAGGCCCGTGGCGGTGCCCGGCGGCGACATGGTGGCATGCCACGGGATGCCGTACGCGTACGCCGTGTTCGGGTTGCACGGGCTCAAGGGCGCGGCGTACACGGTGACGCTGGCCGGCGCCGACGGGACCGTGGCGCAGGCGGTGGCCGCGTGCCACGGGGACGTGGACGGGCACGGCGCGGTGGCGGAGGCATACAAGAGGCTCGGCGTGGCGCCCGGGAGCGTGGCCATCTGCCACTTCCTGCCTCAGGACGACATGATCTGGGTGCGCAACTGAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018580