BGIOSGA018589

From RiceWiki
Revision as of 02:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018589| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018589, complete gene.| tag = OsI_188...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018589

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018589, complete gene.

LocusTag

OsI_18887

Ensembl Transcript ID

BGIOSGA018589-TA

Ensembl Protein ID

BGIOSGA018589-PA

Length

1419

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7296640..7298058

Sequence Coding Region

7297809..7298058,7297065..7297610),complement(7296640..7296899

Genome Context

<gbrowseImage1> name=IndicaChromosome05:7296640..7298058 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:7296640..7298058 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTGGAACAGCTACTGCCGCTGTTGTTGACAGCCGCCTGTGCACACAGCACGCGGAAGGCCCTGCTGCGGTCCTCGCCATCGGCACTGCAAACCCCGCAAATATCGTCTATCAAGATGGGTTTGCCGATTACTACTTCGGTCTAACCAAGAGCGAGTATCTTACTGAACTAAAGGATAAAATGAAGAGAATATGTAAGCAGATCAATCCTTCCACTTTGATCGTTGCACTGATCATCATTATCTCTAGAATAGAGAAACGCTACATTCACCTTGATGAAAAGCTCATCTGTGAGCACCCGGAGATCATTGACAAACACATGCCCTCCCTTGAAACTCGCGTAGACATTGTCACCACTGAGATCCCGAACCTTGCCGAGTCCGCCGCACGTAAGGCCATCGCCAAGTGGGGCCGTCCAGCCACTGACATTACCCACCTCATCTTTAGCACCTATTCCGGGTGCAATGCTCCAAGCGCTGACCTCAAGCTGGCATCACTACTCGGCCTCAACCCTTCAGTCTCTTGCACCATCCTTAGCCTCCACGGTTGCTCTGGAGGCGGTAGGGCACTCCAACTTGCCAAGGAGCTCGCCGAGAACAACTGTGAGGCACGCGTTCTTGTAGCCTGCGCTGAGCTGACGCTAATATGCTTCTCAAACCCAGATGAAAGCAAAATCGTCGGTCATGGACTGTTTGGGGATGGTGCCGGAGCAATCATTGTCGGCGCTGGCCCATTGGTCAATGCAGAGCGTCCACTGTTCGAGATGATCGTTGCCTCGCAAACAACGATACCAGTGCACCCTGGTGGCCGTGCGATCCTTGACAACATAGAAGGCGAGCTTCAGCTGCAGCCAGCAAAGCTTGCGGCAAGCCGCCATGTGTTGAATGAGTATGGGAATATGAGTGGCACGACGATAGCGTTCGTTCTTGATGACTTGCGTCGCCGTCGGGAGAAGGAAGGAGATGAGCATCAACAACCTGAGTGGGGAGTAATGCTAGCCTTTGGACCGGGAATCACAATAGAGGCAATGGTGCTGCGTAACCCACTCTCATGA</cdnaseq>

Protein Sequence

<aaseq>MPGTATAAVVDSRLCTQHAEGPAAVLAIGTANPANIVYQDGFADYYFGLTKSEYLTELKDKMKRICKQINPSTLIVALIIIISRIEKRYIHLDEKLICEHPEIIDKHMPSLETRVDIVTTEIPNLAESAARKAIAKWGRPATDITHLIFSTYSGCNAPSADLKLASLLGLNPSVSCTILSLHGCSGGGRALQLAKELAENNCEARVLVACAELTLICFSNPDESKIVGHGLFGDGAGAIIVGAGPLVNAERPLFEMIVASQTTIPVHPGGRAILDNIEGELQLQPAKLAASRHVLNEYGNMSGTTIAFVLDDLRRRREKEGDEHQQPEWGVMLAFGPGITIEAMVLRNPLS</aaseq>

Gene Sequence

<dnaseqindica>1..250#449..994#1160..1419#ATGCCTGGAACAGCTACTGCCGCTGTTGTTGACAGCCGCCTGTGCACACAGCACGCGGAAGGCCCTGCTGCGGTCCTCGCCATCGGCACTGCAAACCCCGCAAATATCGTCTATCAAGATGGGTTTGCCGATTACTACTTCGGTCTAACCAAGAGCGAGTATCTTACTGAACTAAAGGATAAAATGAAGAGAATATGTAAGCAGATCAATCCTTCCACTTTGATCGTTGCACTGATCATCATTATCTCTAGTTATTTTTCATAAACTCTAATGAGAATAAATTATGCATGCACTTAAATTTTCAGGACACTCCTGCCATAGTTCATTGTAATGATGTTGGAGTTCGGTCAAATTGAAATATGTCCTGCCATTCTTATAACCTCGGAGAGCTATGTACTAAATGTAAGAGATGTGGGTGCTACCTTTTCCGTTTCAGGTCACAGATAAGGAATAGAGAAACGCTACATTCACCTTGATGAAAAGCTCATCTGTGAGCACCCGGAGATCATTGACAAACACATGCCCTCCCTTGAAACTCGCGTAGACATTGTCACCACTGAGATCCCGAACCTTGCCGAGTCCGCCGCACGTAAGGCCATCGCCAAGTGGGGCCGTCCAGCCACTGACATTACCCACCTCATCTTTAGCACCTATTCCGGGTGCAATGCTCCAAGCGCTGACCTCAAGCTGGCATCACTACTCGGCCTCAACCCTTCAGTCTCTTGCACCATCCTTAGCCTCCACGGTTGCTCTGGAGGCGGTAGGGCACTCCAACTTGCCAAGGAGCTCGCCGAGAACAACTGTGAGGCACGCGTTCTTGTAGCCTGCGCTGAGCTGACGCTAATATGCTTCTCAAACCCAGATGAAAGCAAAATCGTCGGTCATGGACTGTTTGGGGATGGTGCCGGAGCAATCATTGTCGGCGCTGGCCCATTGGTCAATGCAGAGCGTCCACTGTTCGAGATGATCGTTGCCTCGCAAACAACGATACCAGGTACTGAGCAAGCACTTGGCATGCAGACCACCGGTAGCGGCATAGATTTCCACCTCTCTATCCAGGTGCCAACACTGATCAAGAACAACATCCGACAGTGCTTGCTCGACACATTCCAATCGGTTGGAAACGTGGATCCTAATTGAAATGACCTCTTCTGGGCAGTGCACCCTGGTGGCCGTGCGATCCTTGACAACATAGAAGGCGAGCTTCAGCTGCAGCCAGCAAAGCTTGCGGCAAGCCGCCATGTGTTGAATGAGTATGGGAATATGAGTGGCACGACGATAGCGTTCGTTCTTGATGACTTGCGTCGCCGTCGGGAGAAGGAAGGAGATGAGCATCAACAACCTGAGTGGGGAGTAATGCTAGCCTTTGGACCGGGAATCACAATAGAGGCAATGGTGCTGCGTAACCCACTCTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018589