BGIOSGA018600

From RiceWiki
Revision as of 02:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018600| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018600, complete gene.| tag = OS05G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018600

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018600, complete gene.

LocusTag

OS05G0209100

Ensembl Transcript ID

BGIOSGA018600-TA

Ensembl Protein ID

BGIOSGA018600-PA

Length

3338

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7062471..7065808

Sequence Coding Region

7065649..7065808,7065435..7065550),complement(7063905..7064854,7063516..7063777),complement(7063181..7063378
,7062903..7063051),complement(7062471..7062741

Genome Context

<gbrowseImage1> name=IndicaChromosome05:7062471..7065808 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:7062471..7065808 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGGCGGCGGCGGCGGCTCGGGCCCCCTCCCCTACTCGATGCGCGATGTGGACGGCAGCGGCGCCTACAACAACGCCAAGTTCCGCCACCGATCTCGCCTCAAGGTTTTGCTCCCTCCCGATCCCCTTCCACCCCTCCCATTTCTTTCCCCGCGAGGAGATGTAGAAGGTGTGGAATCTGGTTGGCTTGAGGGATTCATGGCTCCCCGATCTGTGGGTTTAGCTGCTGCCGAATTAGTTCTTGGTCATGTCCGTGGGCGTCTGCGCCTTAGGATGGCCTCTCAGGCTCTGTTTACCAATAGCAGCAAGTACCAATGTGGAAAGTTCACTGTTGGAAAATTTTTGAGTCTTTTAATGGTTTCTGGCGTAATATACTTACTTGTGCACAAAAGTTCGGATGGTTTTGTATCCGGTGAGCTCCATGAAAAAGTAGGGAATACACATACCAAGAAAGATTTTCCCAAAATTCGTACATTTTGGAGAAAGCCACCAAGGCTGCCGCCACGTCTTCCTCCAAATGAAATCTATAGAAACAATTCATTGCTTCTACAGTCTCCTCAATCTGAATGGACACTCAGACAGAAGAAAGTTAAAGAAGCATTTGAACATGCATGGTCTGGCTATCGAAATTATGCAATGGGTTATGATGAGCTTATGCCTTTAACCCGCCGAGGTATAGATGGACTAGGAGGTCTAGGCGCTACTGTTGTAGATTCTTTAGACACTGCAATAATAATGGGTGCTGATGATGTTGTTTCCGAAGCATCAAAATGGATTGAAGATAATCTCATGAAAAAGTTAAGTGAGAAAGGGCAGGTCAATCTATTTGAAACTACTATCCGTGTCTTGGGAGGGCTTCTTAGTGCCTATCACTTGAGTGGTGGTGACAAAGCAAGAGGTGACTCTGGGATACCAATGACATCTAAAAGGGCTAATCCGGAGCGTCTTTTGGAAGTTTCAAAGGACTTGGCAGACAGATTATTGTTAGCCTTTACATCAAGCCCAACTGCTATACCTTTAAGTGATGTTGTTCTTCGAGATCGAACTGCACATGCAGCCCCTGATGGTTTAAGCAGTACCTCTGAGGCTACAACATTGCAGCTGGAGTACAGTTACCTTAGCACAATATCAGGAGATCCAAAGTATGACTTAGAGGCAATGAAAGTGTTAGAGCATATGCGAACACTCCCAACAGTTGAGGGTTTGGTTCCTATTTACATCAATCCCTCCTCTGGTCAATTTAGTGGAGAAAATATTCGATTAGGATCTCGTGGTGACAGTTACTATGAATACCTATTGAAAGTATGGGTTCAGCAAGAAAGATATCGTGACACTAGTTTGAAGTATCTATTTGAAATGTATACAGAAGCAATGAAAGGGGTCAAGCATCTTCTTGTTCGAAAAACTATTCCAAATGGGCTGGTCTTCGTTGGGGAGCTCCCCTATGGACGAAATAGTGGTTTTAGCCCTAAAATGGATCACCTGGTGTGTTTTCTTCCTGGTACCCTTGCTCTGGGTGCAACGAAGGGTATAACCAAGAAAAAAGCTCTTGAAAATCATTTATTGACTGCGGAAGACATAGACAATCTGCAGCTTGCTGAAGATTTGGCCAAAACTTGTGTTGAAATGTACTTTGTGACATCTACTGGACTTGCTCCTGAAATCGCTTATTTTCACATTGAGGGTAATTCCGAGGGAGGACCTGATGGTGGGAACAAAAGTTCTCAATATGTTAATGATATCATAATCAAACCTCTGGATCGTCACAATCTTTTACGCCCAGAGACTGTAGAATCACTATTTGTTTTATATAGAATCACAGAGGATCCGAAGTATAGGGAATGGGGTTGGCAGATTTTTCAGGCTTTTGAGAAGTATACAAGAGTTGATTCTGGTGGCTATACTTCATTGGATGATGTCACAAGCTTGCCCCCACCTAGGAGAGACAAAATGGAAACTTTCTTCCTTGGAGAAACACTGAAATACTTGTATTTGCTGTTTGGTGAAAGCAATATTCTTCCATTAGATAAGTATGTATTCAACACAGAGGCCCATCCACTTCCAATCATTCAGTCTGCACAACAGATCTCTCATTCGGTATAG</cdnaseq>

Protein Sequence

<aaseq>MSGGGGGSGPLPYSMRDVDGSGAYNNAKFRHRSRLKVLLPPDPLPPLPFLSPRGDVEGVESGWLEGFMAPRSVGLAAAELVLGHVRGRLRLRMASQALFTNSSKYQCGKFTVGKFLSLLMVSGVIYLLVHKSSDGFVSGELHEKVGNTHTKKDFPKIRTFWRKPPRLPPRLPPNEIYRNNSLLLQSPQSEWTLRQKKVKEAFEHAWSGYRNYAMGYDELMPLTRRGIDGLGGLGATVVDSLDTAIIMGADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSGGDKARGDSGIPMTSKRANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVVLRDRTAHAAPDGLSSTSEATTLQLEYSYLSTISGDPKYDLEAMKVLEHMRTLPTVEGLVPIYINPSSGQFSGENIRLGSRGDSYYEYLLKVWVQQERYRDTSLKYLFEMYTEAMKGVKHLLVRKTIPNGLVFVGELPYGRNSGFSPKMDHLVCFLPGTLALGATKGITKKKALENHLLTAEDIDNLQLAEDLAKTCVEMYFVTSTGLAPEIAYFHIEGNSEGGPDGGNKSSQYVNDIIIKPLDRHNLLRPETVESLFVLYRITEDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPRRDKMETFFLGETLKYLYLLFGESNILPLDKYVFNTEAHPLPIIQSAQQISHSV</aaseq>

Gene Sequence

<dnaseqindica>1..160#259..374#955..1904#2032..2293#2431..2628#2758..2906#3068..3338#ATGAGCGGCGGCGGCGGCGGCTCGGGCCCCCTCCCCTACTCGATGCGCGATGTGGACGGCAGCGGCGCCTACAACAACGCCAAGTTCCGCCACCGATCTCGCCTCAAGGTTTTGCTCCCTCCCGATCCCCTTCCACCCCTCCCATTTCTTTCCCCGCGAGGTGCGCGTGCGGTTTGCTGTTGTGATCCCCGAATCCCTTGCGGCGCGGTGCGGCTGCTCGATTCGTTTTCAGTAGCATTTGTGTTGTTTTTGTTTTAGGAGATGTAGAAGGTGTGGAATCTGGTTGGCTTGAGGGATTCATGGCTCCCCGATCTGTGGGTTTAGCTGCTGCCGAATTAGTTCTTGGTCATGTCCGTGGGCGTCTGCGCCTTAGGGTGTGTCTGATCTGATTGGACCTGATAATTATGTGCTGTTCTTGTGCTGCTGCCAAATTTAATTTAATAAGTTAGGTGATGAGGGTGTAGTAATACGTAGTTTTTTGTGCATTTAGGGATTCAGATAGTTGTCTCCTAGTTATGCCAGAGCTGGAAAGAATTGGATGACTTCAAAAGGTTTTCTGCCTTTGTCCATTATGAGTGGACTCCGATAGATCCGGTTTGTTGAATGCTATGTCCATAGAGATTGAGGTTTGAGCGCCAAGTGTTTGACTGCGGTCTTCGGTGCTCCATAAGATTTATGATTGCCAGTTATAACTAAATTCACAATGATAATATTTCGTGAGATCTGTTGGTGTAGTAGTAGATAGTGTTAGAATGCTAATTACATAGCATTAGGAATTAAATAAAATTCACTCTCATGAATCCTACAACTTTGCTTTTGACGATCAATTGATATCCTTAGCTTGTAAAGTAAGTTCATAACAGTTGTTTTCGACTTCTTGCAATGTGAAATTTTTATTAATTTTTTAATGTGTTTATTTCTTCTTTCGTAATATTTATTTATTTCCCTATGCAGATGGCCTCTCAGGCTCTGTTTACCAATAGCAGCAAGTACCAATGTGGAAAGTTCACTGTTGGAAAATTTTTGAGTCTTTTAATGGTTTCTGGCGTAATATACTTACTTGTGCACAAAAGTTCGGATGGTTTTGTATCCGGTGAGCTCCATGAAAAAGTAGGGAATACACATACCAAGAAAGATTTTCCCAAAATTCGTACATTTTGGAGAAAGCCACCAAGGCTGCCGCCACGTCTTCCTCCAAATGAAATCTATAGAAACAATTCATTGCTTCTACAGTCTCCTCAATCTGAATGGACACTCAGACAGAAGAAAGTTAAAGAAGCATTTGAACATGCATGGTCTGGCTATCGAAATTATGCAATGGGTTATGATGAGCTTATGCCTTTAACCCGCCGAGGTATAGATGGACTAGGAGGTCTAGGCGCTACTGTTGTAGATTCTTTAGACACTGCAATAATAATGGGTGCTGATGATGTTGTTTCCGAAGCATCAAAATGGATTGAAGATAATCTCATGAAAAAGTTAAGTGAGAAAGGGCAGGTCAATCTATTTGAAACTACTATCCGTGTCTTGGGAGGGCTTCTTAGTGCCTATCACTTGAGTGGTGGTGACAAAGCAAGAGGTGACTCTGGGATACCAATGACATCTAAAAGGGCTAATCCGGAGCGTCTTTTGGAAGTTTCAAAGGACTTGGCAGACAGATTATTGTTAGCCTTTACATCAAGCCCAACTGCTATACCTTTAAGTGATGTTGTTCTTCGAGATCGAACTGCACATGCAGCCCCTGATGGTTTAAGCAGTACCTCTGAGGCTACAACATTGCAGCTGGAGTACAGTTACCTTAGCACAATATCAGGAGATCCAAAGTATGACTTAGAGGCAATGAAAGTGTTAGAGCATATGCGAACACTCCCAACAGTTGAGGGTTTGGTTCCTATTTACATCAAGTATGCATTGCTTGAACCCTTCTGTGTTTTGGCACTAAATTAAGTTCAGAATATATTGCATTGTCTAACCATCAGAAAAATTGATATTTGAGGTGATTATGCTCTCATTATTGTTTTCTATATGCAGTCCCTCCTCTGGTCAATTTAGTGGAGAAAATATTCGATTAGGATCTCGTGGTGACAGTTACTATGAATACCTATTGAAAGTATGGGTTCAGCAAGAAAGATATCGTGACACTAGTTTGAAGTATCTATTTGAAATGTATACAGAAGCAATGAAAGGGGTCAAGCATCTTCTTGTTCGAAAAACTATTCCAAATGGGCTGGTCTTCGTTGGGGAGCTCCCCTATGGACGAAATAGTGGTTTTAGCCCTAAAATGGATCACCTGGTATGCAACTACTTGGAACTCTCTCTATTTCTTTTATAACTAAAAATAATAATTCAATAATCCTTCAAATCTTTTCTTTTTCCCCGGCATTTTTTGACCCCTTTTGTGATGTGCACCACTTTGTCTTCATTCTGTAGGTGTGTTTTCTTCCTGGTACCCTTGCTCTGGGTGCAACGAAGGGTATAACCAAGAAAAAAGCTCTTGAAAATCATTTATTGACTGCGGAAGACATAGACAATCTGCAGCTTGCTGAAGATTTGGCCAAAACTTGTGTTGAAATGTACTTTGTGACATCTACTGGACTTGCTCCTGAAATCGCTTATTTTCACATTGAGGTAAGTGGTTCAGCATTTTATGGAGTATTACAATGTACTCCTGAATTAAATCTCCATTACTTGTTATTTTTCATATATATTGATGTCCATTTTGATTTTGAAGAAAATATTGACATGTGCATTTTACAGGGTAATTCCGAGGGAGGACCTGATGGTGGGAACAAAAGTTCTCAATATGTTAATGATATCATAATCAAACCTCTGGATCGTCACAATCTTTTACGCCCAGAGACTGTAGAATCACTATTTGTTTTATATAGAATCACAGAGGATCCGAAGTAAGATATAACACTACTTTATTATCTTTAGGTCACCTGCCACTCAATTTTGAATAATGTTATGGGTTAGGGTTCATAGGGGGTAAACACCGCCGGGAGGATAGCCAGGCAATAATGCCACCACTGACTATCCTTTTATTATCTCCTTTTCTTTTACACAGGTATAGGGAATGGGGTTGGCAGATTTTTCAGGCTTTTGAGAAGTATACAAGAGTTGATTCTGGTGGCTATACTTCATTGGATGATGTCACAAGCTTGCCCCCACCTAGGAGAGACAAAATGGAAACTTTCTTCCTTGGAGAAACACTGAAATACTTGTATTTGCTGTTTGGTGAAAGCAATATTCTTCCATTAGATAAGTATGTATTCAACACAGAGGCCCATCCACTTCCAATCATTCAGTCTGCACAACAGATCTCTCATTCGGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018600

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018600&oldid=47356"