BGIOSGA018612

From RiceWiki
Revision as of 02:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018612| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018612, complete gene.| tag = OsI_188...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018612

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018612, complete gene.

LocusTag

OsI_18850

Ensembl Transcript ID

BGIOSGA018612-TA

Ensembl Protein ID

BGIOSGA018612-PA

Length

1529

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6948682..6950210

Sequence Coding Region

6950136..6950210,6949943..6950044),complement(6949445..6949504,6949079..6949351),complement(6948919..6948993
,6948781..6948837),complement(6948682..6948702

Genome Context

<gbrowseImage1> name=IndicaChromosome05:6948682..6950210 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:6948682..6950210 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCAGCCGGCGCCGGCGCCGGAGCCGATGCTGCTCGACGCGCAGCCGCCCGCCGCCGTCGCCTGCGACAAGAAGCAGCAGGAGGGGGAGGCGCCGTACGCGGAGGGGAATGACGCGGTGACCGGGCACATCATCTCCACCACCATCGGGGGCAAGAACGGCGAGCCCAAGAGGACAATTAGCTACATGGCGGAGCGCGTTGTGGGCACTGGTTCTTTCGGTATCGTCTTTCAGGCTAAATGCTTGGAGACAGGAGAGACTGTTGCCATTAAGAAGGTATTGCAGGACCGACGGTACAAGAACCGTGAGCTTCAGCTTATGCGCGCCATGGACCACCCCAATGTCATCTCCCTGAAGCATTGCTTCTTCTCAACCACAAGTAGGGATGAGCTGTTCCTCAATCTTGTCATGGAATATGTTCCAGAAACACTCTACCGTGTGCTTAAGCACTACAGCAATGCCAACCACCGGATGCCACTTATCTACGTCAAGCTTTACATGTATCAGTTATTTAGGGGGCTTGCGTACATTCATACTGTTCCAGGGGTCTGTCATAGGGATGTGAAGCCACAAAATGTTTTGGTGGATCCTCTAACTCATCAAGTCAAGCTCTGTGACTTTGGGAGCGCAAAAACACTGACGATTCTTGCTGTAGACTAG</cdnaseq>

Protein Sequence

<aaseq>MDQPAPAPEPMLLDAQPPAAVACDKKQQEGEAPYAEGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRAMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNANHRMPLIYVKLYMYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKLCDFGSAKTLTILAVD</aaseq>

Gene Sequence

<dnaseqindica>1..75#167..268#707..766#860..1132#1218..1292#1374..1430#1509..1529#ATGGACCAGCCGGCGCCGGCGCCGGAGCCGATGCTGCTCGACGCGCAGCCGCCCGCCGCCGTCGCCTGCGACAAGGTATGTGACTAACCGGATCTTGGCGTGCTGATCCGTGGTTTTGCGGTTCTTTGCTGTGTGCTGATTTAGTGTGCTGTTCTTGGTGGAGCAGAAGCAGCAGGAGGGGGAGGCGCCGTACGCGGAGGGGAATGACGCGGTGACCGGGCACATCATCTCCACCACCATCGGGGGCAAGAACGGCGAGCCCAAGAGGGTGAGACACGAGCCTTCCCCCCCCCCCCCCCTTTGTTGTTTTGGTCTTGGTTCCATTTCTTGAGTTGCAGTGAAATGCTGCCGGTTCTTGGTTTAGGAAGGTGTTCTTGTGTGTTCTGCAGCTAGTTTCTTAGCTCCGTGTAGTGATTTTTGGTGATGGGAAAGCCATTGGCTCTAAGAGAGGCATGTGGATTAGTGGTCAGATTTTGCAAAAGAAGTAAACTGTTGGTAGATATCAGCCAATTTATTTAGTGTTAGTTGTTCATGTTCTTGTATTACTGCAAGATCTGTTGTAAATAACTAAATATGGCTTGTTTGGTGCTCATTTTTGGTGGTTTGTAGGGGAAAAAGTTGGGTGTGTTGGATTACATTGTTGTGAACACTAGTGCTCATAATTAAATTTTGGTCTTAAGATGGTAATTTTGTACTTGATTTTCAGACAATTAGCTACATGGCGGAGCGCGTTGTGGGCACTGGTTCTTTCGGTATCGTCTTTCAGGTGATTCATCTTTCAGAAAGTTGTTATTTGTTTCTTTCTTTTCGTGCTGTCGACTTGTTGGTCTGATGTTTAGCTTGCTGGTTTCATGTGTAGGCTAAATGCTTGGAGACAGGAGAGACTGTTGCCATTAAGAAGGTATTGCAGGACCGACGGTACAAGAACCGTGAGCTTCAGCTTATGCGCGCCATGGACCACCCCAATGTCATCTCCCTGAAGCATTGCTTCTTCTCAACCACAAGTAGGGATGAGCTGTTCCTCAATCTTGTCATGGAATATGTTCCAGAAACACTCTACCGTGTGCTTAAGCACTACAGCAATGCCAACCACCGGATGCCACTTATCTACGTCAAGCTTTACATGTATCAGGTGTGTGGATTGCTAATCAATCATAAATTTTGAAATGCCTGCCTTCCTGTGTGTCTCTTCTAAGTCTATTCTACATTGGCTGCAGTTATTTAGGGGGCTTGCGTACATTCATACTGTTCCAGGGGTCTGTCATAGGGATGTGAAGCCACAAAATGTTTTGGTAGGTATTCATGATCAGATTATTATTTTGCTATGCGATGGCCTTTGATTATTGGCTCTGAACTCCTTTCTTGCAATACAGGTGGATCCTCTAACTCATCAAGTCAAGCTCTGTGACTTTGGGAGCGCAAAAACACTGGTATTGGCCTTTTCCACCCTAAAGTTTTGTAATACGCACACATTACTTTAGACTTTCTTTTTTTTAATTGGACTTTAGACGATTCTTGCTGTAGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018612