BGIOSGA018623

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Revision as of 02:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018623| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018623, complete gene.| tag = OsI_188...")
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Gene Name

BGIOSGA018623

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018623, complete gene.

LocusTag

OsI_18825

Ensembl Transcript ID

BGIOSGA018623-TA

Ensembl Protein ID

BGIOSGA018623-PA

Length

2843

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6696814..6699656

Sequence Coding Region

6699625..6699656,6698653..6698734),complement(6698052..6698113,6697858..6697957),complement(6697717..6697758
,6697574..6697615),complement(6697218..6697389,6696814..6696824

Genome Context

<gbrowseImage1> name=IndicaChromosome05:6696814..6699656 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:6696814..6699656 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTCGGTAAAGCGCAACAACTGTAGCAGCGTGAAGGAAACTATTGAGAGGTACAAGAAAGCCAACAGTGACACCTCCAACGCCAGTACAGTTGCAGAGATCAATGCCCAGCACTACCAGCAGGAAGCTGCTAAGCTGAAGCAACAGATCACCAACCTGCAGAACTCCAACAGGACCCTAGTAGGTGATAATATCACCACCATGAACCACAGAGAACTTAAGCAGCTGGAAGGCAGACTGGACAAAGGCCTAGGAAAGATTAGAGCACGGAAGAACGAATTGCTGTGTGCTGAAATTGAGTATATGCAGAGAAGGGAAACGGAGCTGCAGAATGACAACATGTACTTAAAGAGCAAAGTTGCTGAGAGTGAAAGAGGACTGCAAACAGTGAACATGATGGGTTCAGCATCTACGAGCGAGTACGTGCAAAATATGATCCATTATGATCCAAGAAACTTCCTGCAATTCAACATCATGCATCAGCCTCAGTATTATCCTGAACAGGAGGACCGAAAGGCCTTTATGTCAGATGAAAGATAA</cdnaseq>

Protein Sequence

<aaseq>MSSVKRNNCSSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMMGSASTSEYVQNMIHYDPRNFLQFNIMHQPQYYPEQEDRKAFMSDER</aaseq>

Gene Sequence

<dnaseqindica>1..32#923..1004#1544..1605#1700..1799#1899..1940#2042..2083#2268..2439#2833..2843#ATGTCCTCGGTAAAGCGCAACAACTGTAGCAGGTAGAATGACTTGTGATGTAAAATTTGTACTAGACTCCTGTTCAGACTTTTTCAACCTCTCCCCGGACCGGTGGATTTGGCATTGTTCTTGGAGACAAACAGATGAACACAACAATGGTATATACAGTACAGTGTTTGTACAGTACTATGACACTCAATCTTACTGGCTTCCTGATCTTTTTGCAAATTTTATTAGCAATGACTATATGAAAGTTAGGGGGTGTTTGGATCCAGGGACTAAACTTTAGTCCCTATCACATCGGTTATTTGACACTAATTTGAAGCATTAAACATAAACTACTTACGAAACTAATTATATAAATGAGAGCTAATTCGCGAGACAATTTTTTTAAGCCTAATTAATCCATAATTAGCACATATTTACTGTACTATCACATAGGCTAATCATAGATTAATTAGGCTCAATAGATTCGTCTCGTGAATTAGTCCAGGGCTATGAAAGGAGTTTTGTCATTTGTCTACGTACGTTTAATACTTTTAATTAGTGTCCATACATCCAATGAGATATATATGGACTAAAAATTTTTAGCTCCATCCAAACAGCCCCTCAGAGTGACATTTTTTTACAACCAAACAATGCTTTAGATTAAACATTAAATAAGATCATGCCACAGTTGTTTTATTGTTTAGAAAATGAAAGGTGGCCCAAACTGCCACTAACTCCCCTTTTTTTTTTGTTGATATCCTTCAGGAAAAACCCCATGTTAGTTTGAAGATTTGAACTTAGACATATGTATAATTGGTGAAAAAAAAAAATTCTAGAAGAAACTTCTATACCGTGGCCAAAACTTCGTAGTTATTCTTACTTCCATGGACGTATGTGTGCAAGTAAACTAACTATTTATGTGTGCTACTATGCACAAATGCAGCGTGAAGGAAACTATTGAGAGGTACAAGAAAGCCAACAGTGACACCTCCAACGCCAGTACAGTTGCAGAGATCAATGCCCAGGTAACATCATCTGAATTCTCAAACAAAAAAAAATCATCTGTCAGTACAAATGCAGCATGCAGTAGTTTTCTCTGGAGCTTTTATCATTCAGCAACAATGCAACATTCCTTGTAATTAACCAATGGTTTCTATGCTGTAAAAAATGAGTTCTCTGACCAAAATCTTCAGATTGGACATCCTGAATAGAAGCTACAGTGCTTTACACAATGGAAATTCCAGTGATGCTATATATATAGTAGTAGTATATAGTTTTGACCAACAGACATACTCCTATCTGTGTTTGTCCACTGGACAAAGTTCTTCATGATTCCATGCTTGAAAATTGAAATGGCTCACTGCATGTTTTTGGCACTTTTGTCATTCATTCATGCATATGCATGCATGCAGGTTGATTACACAGTTTAATATGGTATGATTTGATGATGCACATTTGAACAAAATAAACATGAAGAGTCAAACATTCCAGTTAGCAAACTGACACAACTTGTCATGATTTTAACTACCAGTACTAAAAAAAAAATCAAATTACAAACTTGCAGCACTACCAGCAGGAAGCTGCTAAGCTGAAGCAACAGATCACCAACCTGCAGAACTCCAACAGGTTCATTATTTCACTCAGCTGCTTAGAATTTTTTTCAACTTGACAAAGTAGTTCATCTGGTTATAACTAAATTCTCCATTAATTAATGAATTAGGACCCTAGTAGGTGATAATATCACCACCATGAACCACAGAGAACTTAAGCAGCTGGAAGGCAGACTGGACAAAGGCCTAGGAAAGATTAGAGCACGGAAGGTATATTAATTGTGTGCTACATTTACATAGAATTCCAAGTTGAAAAGGGCATATTGTTAATTAATTCATCTAATTTGATAAGCATTCCATATCCTGCAGAACGAATTGCTGTGTGCTGAAATTGAGTATATGCAGAGAAGGGTAAATACTATCAGCAAAATACCACTGTTTTCTTTCTTGCAAAATTATTTGGTCTAGTTAATTGACATCATAAGATAACAGCACGAGTATAATCTTTTCAGGAAACGGAGCTGCAGAATGACAACATGTACTTAAAGAGCAAAGTAAGTATTCTGTTCTACATTGCAAAAAAAAAAGAATGAGATTCGCTTTCAAAAAGAGATTAACCTAGCTACATGGTAAATCTGAATTGAAGTTACTGAAATAACCTACATATATAGCAAATCATACCTAATTGACTGAAATTCTACGTCATCATACTAATTAATTATAATTATTATTGTGAAGGTTGCTGAGAGTGAAAGAGGACTGCAAACAGTGAACATGATGGGTTCAGCATCTACGAGCGAGTACGTGCAAAATATGATCCATTATGATCCAAGAAACTTCCTGCAATTCAACATCATGCATCAGCCTCAGTATTATCCTGAACAGGAGGACCGAAAGGCCTTTATGTCAGGTAAAAAATATTCTCAGTGTAACATAGTCAGAGTTCATAGTTCAACAAATGAAATTTGAATGTTCATTACCTTCTCATTGTAAGCATCTGAGTCGTAGTTAGAGACATCAAGTTTTTCAAAATAAAAAAATAAAAAATAATGAAGAGTTTTCTTGGGAGGATTATATTGCAGGGTCAGAAATGTGTAGGGCTTATCTCACATTCTAGGTATTGTTTGGATTTGCTTGCAACCATAAGAATTATAACTCAAATTTCCCTTGCATCAAATTATAGAAGGAATTCGGAGGCATAAGTTATAGACAAATAATGTGGTCGAGACAAGTTTGTGCAAGTACGTTCAGATGCAACGCGTAACTAATTTTGTTTTACTGTTTACATTCCTTGCACTTGCAGATGAAAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018623